BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00004474
         (3483 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002265454.1| PREDICTED: DNA-directed RNA polymerase III s...  1840   0.0  
ref|XP_002525541.1| DNA-directed RNA polymerase III subunit, put...  1785   0.0  
ref|XP_002321356.1| predicted protein [Populus trichocarpa] gi|2...  1776   0.0  
ref|XP_004141655.1| PREDICTED: DNA-directed RNA polymerase III s...  1774   0.0  
ref|XP_003529060.1| PREDICTED: DNA-directed RNA polymerase III s...  1724   0.0  

>ref|XP_002265454.1| PREDICTED: DNA-directed RNA polymerase III subunit RPC2 [Vitis
            vinifera]
          Length = 1142

 Score = 1840 bits (4767), Expect = 0.0
 Identities = 902/1141 (79%), Positives = 1019/1141 (89%), Gaps = 6/1141 (0%)
 Frame = +1

Query: 49   ITINKQHLAAPIKSAVDKFQLLPEFLKVRGLVKQHLDSFNYFIETGIKKVVHANNIITSI 228
            ++I+K   A P+K AVDKF LLPEFLKVRGLVKQHLDSFNYF++T IKK+V AN+ I S 
Sbjct: 4    MSIHKHFPADPVKQAVDKFPLLPEFLKVRGLVKQHLDSFNYFVKTDIKKIVRANDRIVSS 63

Query: 229  VDPGLYLKYTDVRIGDPSIKLDHAVKQLTPHMCRLSDITYAASILVDIEYTTGAGVNNLK 408
            VDP +YL++ DVRIG+PSI +D   ++L PH CRLSD+TYAA ILV+IEY TG+ V   K
Sbjct: 64   VDPSIYLRFKDVRIGEPSITVDGISEKLNPHTCRLSDMTYAAPILVNIEYITGSHVQ--K 121

Query: 409  RKVERKNVEIGRLPIMLRSHKCILYGKDEAELAKLRECPLDPGGYFVVKGTEKVVLIQEQ 588
             +VE+ +V IGR+PIMLRS  C+LY KDEAELA+L ECPLDPGGYFVVKGTEKV+LIQEQ
Sbjct: 122  TRVEKNDVVIGRMPIMLRSCCCVLYKKDEAELARLGECPLDPGGYFVVKGTEKVILIQEQ 181

Query: 589  LSKNRIIIDSDRKGRLMAXXXXXXXXXXXXXNLIMDKEKIYLELNAFEKVVPIMVVMKAM 768
            LSKNRIIID+D+KG + A              ++M+KEKI+L+LN F   +PIM+VMKAM
Sbjct: 182  LSKNRIIIDTDKKGNINASVTSSTESTKSKTVIVMEKEKIWLQLNQFTSKIPIMIVMKAM 241

Query: 769  GMESDQEVVQMLGRDPRYATLLLPSIQECVKENVHTQQQALEFLDKRVRKF-LYNSNVSQ 945
            GMESDQEVVQM+GR+PRY+ LLLPS++EC    ++TQQQALEFL+++V+K   YN ++ +
Sbjct: 242  GMESDQEVVQMVGRNPRYSALLLPSMEECASHGIYTQQQALEFLERKVKKLPFYNPSLEK 301

Query: 946  EGRALIVLRDVFIANVPVHQHNFRPKCMYVAVMLRRMMEAYLNKDAMDDKDYVGNKRLEL 1125
            EGR + +LRD FIANVPV Q+NFRPKC+YVAVMLRRMM+A LNKDAMDDKDYVGNKRLEL
Sbjct: 302  EGRGMAILRDTFIANVPVRQNNFRPKCLYVAVMLRRMMDAILNKDAMDDKDYVGNKRLEL 361

Query: 1126 SGQLISLLFEDLFKTANSDIKKRVDAVLAK--RSTQFDF---LQYIKGDIITRGLENAMA 1290
            SGQLISLLFEDLFKT  S++KK +DA+LAK  RS++FDF   L++I  D IT GLE  ++
Sbjct: 362  SGQLISLLFEDLFKTMISEVKKTIDAILAKPSRSSRFDFSQCLRFIVRDSITVGLERTLS 421

Query: 1291 TGNWDLKRFKMHRKGMTQVLARLSFIASLGHMTKIQPQFEKSRKVSGPRALQPSQWGMLC 1470
            TGNWD+KRF+MHRKGM+QV+ARLS+I SLGHMTKI PQFEKSRKVSGPRALQPSQWGMLC
Sbjct: 422  TGNWDVKRFRMHRKGMSQVVARLSYIGSLGHMTKISPQFEKSRKVSGPRALQPSQWGMLC 481

Query: 1471 PCDTPEGESCGLVKNLALMTHVTTDEEDGPLVSLCRSLGVEDLELMSGEELHSANSFLVI 1650
            PCDTPEGE+CGLVKNLALMTHVTTDEE+ PL+SLC SLGVEDLEL+SGEELH+ NSFL+I
Sbjct: 482  PCDTPEGEACGLVKNLALMTHVTTDEEESPLISLCYSLGVEDLELLSGEELHTPNSFLII 541

Query: 1651 CNGLILGKHRKPQHFANALRKLRRAGRIGDFVSVFVNEKQRCLYIASDGGRVCRPLVVAD 1830
             NGLILGKHR+PQ FANALRKLRRAG+IG+FVSVFVNEKQ C+YIASDGGRVCRP+V+AD
Sbjct: 542  FNGLILGKHRRPQRFANALRKLRRAGKIGEFVSVFVNEKQHCVYIASDGGRVCRPVVIAD 601

Query: 1831 KGVSRIKEHHMKELRDGARTFNDFLREGLIEYLDVNEQNNALIALYDGEAEPETTHIEIE 2010
            KG SRIKEHHMKEL DG RTF+DFLR+GLIEYLDVNE+NNALIALY+ +A+PETTHIEIE
Sbjct: 602  KGKSRIKEHHMKELIDGVRTFDDFLRDGLIEYLDVNEENNALIALYEADAKPETTHIEIE 661

Query: 2011 PFTILGVCAGLIPFPHHNQSPRNTYQCAMGKQAMGNIAYNQLDRMDSLLYLLVYPQRPLL 2190
            PFTILGVCAGLIPFPHHNQSPRNTYQCAMGKQAMGNIAYNQL RMDSLLYLLVYPQRPLL
Sbjct: 662  PFTILGVCAGLIPFPHHNQSPRNTYQCAMGKQAMGNIAYNQLCRMDSLLYLLVYPQRPLL 721

Query: 2191 TTKTIELVGYDKLGAGQNATVAVMSYSGYDIEDAIVMNKASLDRGFGRCIVMKKLSAVCQ 2370
            TT+TIELVGYDKLGAGQNATVAVMSYSGYDIEDAIVMNK+SLDRGFGRCIVMKK SAV Q
Sbjct: 722  TTRTIELVGYDKLGAGQNATVAVMSYSGYDIEDAIVMNKSSLDRGFGRCIVMKKFSAVNQ 781

Query: 2371 KYPNNSMDRIVRPQRVGRDAERTQLLDDDGLASPGEIIRPYDIYINKQSPINTKSTYESS 2550
            +Y NN+ DRIVRP +VG DAER Q+LDDDGLA+PGEII+P DIYINK+SPI TK    S 
Sbjct: 782  RYENNASDRIVRPLKVGHDAERMQILDDDGLAAPGEIIKPNDIYINKESPIITKGPLISP 841

Query: 2551 KGLPDNAYKPSIQTYKGARGETAVVDRVQLNSDKDNNLCFRFIIRHTRRPEVGDKFSSRH 2730
             GLPD+AYKPS QT+KG  GE +VVDRV L SDK++NLC +F+IRHTRRPEVGDKFSSRH
Sbjct: 842  VGLPDSAYKPSRQTFKGPEGEASVVDRVALCSDKNSNLCIKFLIRHTRRPEVGDKFSSRH 901

Query: 2731 GQKGVCGTIIQQEDFPFSERGICPDLIMNPHGFPSRMTIGKMIELLGGKAGVSCGRFHYG 2910
            GQKGVCGTIIQQEDFPFSERGICPDLIMNPHGFPSRMT+GKMIELLGGKAGVSCGRFHYG
Sbjct: 902  GQKGVCGTIIQQEDFPFSERGICPDLIMNPHGFPSRMTVGKMIELLGGKAGVSCGRFHYG 961

Query: 2911 SAFGEPSGHADRVEAISETLVKNGFSYSGKDFIYSGITGCPLQAYIFMGPIYYQKLKHMV 3090
            SAFGEPSGHAD+VE IS+TLVK+GFSYSGKDFIYSGITGCPLQAYIFMGPIYYQKLKHMV
Sbjct: 962  SAFGEPSGHADKVETISKTLVKHGFSYSGKDFIYSGITGCPLQAYIFMGPIYYQKLKHMV 1021

Query: 3091 LDKMHARARGPRVMLTRQPTEGRSRDGGLRLGEMERDCLIAYGASMLIFERLMISSDPFE 3270
            LDKMHAR  GPRVMLTRQPTEGR+R+GGLR+GEMERDCLIAYGASMLIFERLM+SSDPFE
Sbjct: 1022 LDKMHARGSGPRVMLTRQPTEGRARNGGLRVGEMERDCLIAYGASMLIFERLMVSSDPFE 1081

Query: 3271 VQVCRACGMLGYFNHKVKTSVCSSCKNGDNISTMKLPYACKLLFQELQSMNVVPRLKLTE 3450
            VQVCR CG+LGY+NHK+K  +CS+CKNGDNISTMKLPYACKLLFQELQ+MNVVPRLKLTE
Sbjct: 1082 VQVCRVCGLLGYYNHKLKIGICSTCKNGDNISTMKLPYACKLLFQELQAMNVVPRLKLTE 1141

Query: 3451 A 3453
            A
Sbjct: 1142 A 1142


>ref|XP_002525541.1| DNA-directed RNA polymerase III subunit, putative [Ricinus communis]
            gi|223535120|gb|EEF36800.1| DNA-directed RNA polymerase
            III subunit, putative [Ricinus communis]
          Length = 1139

 Score = 1785 bits (4623), Expect = 0.0
 Identities = 879/1135 (77%), Positives = 993/1135 (87%), Gaps = 2/1135 (0%)
 Frame = +1

Query: 55   INKQHLAAPIKSAVDKFQLLPEFLKVRGLVKQHLDSFNYFIETGIKKVVHANNIITSIVD 234
            I+KQ L APIKSAVDKFQLLPEFLKVRGLVKQHLDSFNYF+  GIKK+V AN+ I S VD
Sbjct: 22   IDKQKLTAPIKSAVDKFQLLPEFLKVRGLVKQHLDSFNYFVNIGIKKIVRANDRIVSTVD 81

Query: 235  PGLYLKYTDVRIGDPSIKLDHAVKQLTPHMCRLSDITYAASILVDIEYTTGAGVNNLKRK 414
            PG+YL++ DVRIG PS  +D   +QL+PHMCRLSD TYAA ILV++EY  G+  ++ K +
Sbjct: 82   PGIYLRFKDVRIGTPSDIMDGVSEQLSPHMCRLSDKTYAAPILVNVEYIYGS--HDQKTR 139

Query: 415  VERKNVEIGRLPIMLRSHKCILYGKDEAELAKLRECPLDPGGYFVVKGTEKVVLIQEQLS 594
            VE+ +V IGR+PIMLRS  C+LYGKDEAELA+L ECPLDPGGYFV+KGTEKV+LIQEQLS
Sbjct: 140  VEKNDVVIGRMPIMLRSRSCVLYGKDEAELARLGECPLDPGGYFVIKGTEKVILIQEQLS 199

Query: 595  KNRIIIDSDRKGRLMAXXXXXXXXXXXXXNLIMDKEKIYLELNAFEKVVPIMVVMKAMGM 774
            KNRIIID+D+KG + A              + M+KEK+YL LN F K +PIMVV+KAMGM
Sbjct: 200  KNRIIIDTDKKGNINASVTSSTEATKSKTIIQMEKEKMYLCLNQFVKKIPIMVVIKAMGM 259

Query: 775  ESDQEVVQMLGRDPRYATLLLPSIQECVKENVHTQQQALEFLDKRVRKFLYNSNVSQEGR 954
            ESDQEVVQM+GRDPRY+ LLLPSI+EC   +++TQQ+ALE+LD             +E R
Sbjct: 260  ESDQEVVQMVGRDPRYSALLLPSIEECAGLSIYTQQKALEYLD------------GKENR 307

Query: 955  ALIVLRDVFIANVPVHQHNFRPKCMYVAVMLRRMMEAYLNKDAMDDKDYVGNKRLELSGQ 1134
            AL +LRDVF+ANVPVH++NFRPKC+YVAVMLRRMMEA LNKDAMDDKDYVGNKRLELSGQ
Sbjct: 308  ALTILRDVFLANVPVHKNNFRPKCLYVAVMLRRMMEAMLNKDAMDDKDYVGNKRLELSGQ 367

Query: 1135 LISLLFEDLFKTANSDIKKRVDAVLAK--RSTQFDFLQYIKGDIITRGLENAMATGNWDL 1308
            LISLLFEDLFKT  +++++ +D VL K  RS++FD  QYI  D IT GLE  ++TGN+D+
Sbjct: 368  LISLLFEDLFKTMITEVQRTIDTVLTKQNRSSRFDLAQYIVRDNITNGLERTLSTGNFDV 427

Query: 1309 KRFKMHRKGMTQVLARLSFIASLGHMTKIQPQFEKSRKVSGPRALQPSQWGMLCPCDTPE 1488
            KRFKMHRKGMTQVL RLS+IASLG MT++ PQFEKSRKVSGPRALQPSQWGMLCPCDTPE
Sbjct: 428  KRFKMHRKGMTQVLVRLSYIASLGMMTRVSPQFEKSRKVSGPRALQPSQWGMLCPCDTPE 487

Query: 1489 GESCGLVKNLALMTHVTTDEEDGPLVSLCRSLGVEDLELMSGEELHSANSFLVICNGLIL 1668
            GE+CGLVKNLALMTHVTTD+E+GPL+SLC  LGVEDLEL+SGEELH+ NSFLVI NGLIL
Sbjct: 488  GEACGLVKNLALMTHVTTDDEEGPLISLCYCLGVEDLELLSGEELHTPNSFLVIFNGLIL 547

Query: 1669 GKHRKPQHFANALRKLRRAGRIGDFVSVFVNEKQRCLYIASDGGRVCRPLVVADKGVSRI 1848
            GKHR+PQ+F N++RKLRRAG+IG+FVSVFVNEKQR +Y+ASDGGRVCRPLV+AD+GVSRI
Sbjct: 548  GKHRRPQYFVNSMRKLRRAGKIGEFVSVFVNEKQRAVYLASDGGRVCRPLVIADRGVSRI 607

Query: 1849 KEHHMKELRDGARTFNDFLREGLIEYLDVNEQNNALIALYDGEAEPETTHIEIEPFTILG 2028
            KEHHMKELRDG RTF+DFLR+GLIEYLDVNE+NNAL+ALY+GEA PETTHIEIEPFTILG
Sbjct: 608  KEHHMKELRDGVRTFDDFLRDGLIEYLDVNEENNALVALYEGEATPETTHIEIEPFTILG 667

Query: 2029 VCAGLIPFPHHNQSPRNTYQCAMGKQAMGNIAYNQLDRMDSLLYLLVYPQRPLLTTKTIE 2208
            VCAGLIPFPHHNQSPRNTYQCAMGKQAMGNIAYNQL RMDSLLYLLVYPQRPLLTT+TIE
Sbjct: 668  VCAGLIPFPHHNQSPRNTYQCAMGKQAMGNIAYNQLFRMDSLLYLLVYPQRPLLTTRTIE 727

Query: 2209 LVGYDKLGAGQNATVAVMSYSGYDIEDAIVMNKASLDRGFGRCIVMKKLSAVCQKYPNNS 2388
            LVGYDKLGAGQNATVAVMSYSGYDIEDAIVMNKASLDRGFGRCIVMKK  A+ QKY N +
Sbjct: 728  LVGYDKLGAGQNATVAVMSYSGYDIEDAIVMNKASLDRGFGRCIVMKKYPAIRQKYENGA 787

Query: 2389 MDRIVRPQRVGRDAERTQLLDDDGLASPGEIIRPYDIYINKQSPINTKSTYESSKGLPDN 2568
             DRI+RP R     ER ++LD DGLA+PGEII+P DIY+ K+ PI+T    +SS  L + 
Sbjct: 788  SDRILRPDRT---VERERVLDYDGLAAPGEIIKPSDIYVKKECPIDTMGPVKSSAALENI 844

Query: 2569 AYKPSIQTYKGARGETAVVDRVQLNSDKDNNLCFRFIIRHTRRPEVGDKFSSRHGQKGVC 2748
             Y+PS  +YKG  GE+ V+DRV L+SD++NNLC + +IRHTRRPEVGDKFSSRHGQKGVC
Sbjct: 845  KYRPSPLSYKGPEGESPVIDRVALSSDRNNNLCIKVMIRHTRRPEVGDKFSSRHGQKGVC 904

Query: 2749 GTIIQQEDFPFSERGICPDLIMNPHGFPSRMTIGKMIELLGGKAGVSCGRFHYGSAFGEP 2928
            GTIIQQEDFPFSERGICPDLIMNPHGFPSRMT+GKMIELLGGKAGVSCGRFHYGSAFGEP
Sbjct: 905  GTIIQQEDFPFSERGICPDLIMNPHGFPSRMTVGKMIELLGGKAGVSCGRFHYGSAFGEP 964

Query: 2929 SGHADRVEAISETLVKNGFSYSGKDFIYSGITGCPLQAYIFMGPIYYQKLKHMVLDKMHA 3108
            SGHAD VEAISETLV  GFSY+GKD IYSGITGCPLQAYIFMGPIYYQKLKHMVLDKMHA
Sbjct: 965  SGHADTVEAISETLVNRGFSYNGKDIIYSGITGCPLQAYIFMGPIYYQKLKHMVLDKMHA 1024

Query: 3109 RARGPRVMLTRQPTEGRSRDGGLRLGEMERDCLIAYGASMLIFERLMISSDPFEVQVCRA 3288
            R  GPRVMLTRQPTEGR+R+GGLR+GEMERDCLIAYGASMLIFERLMISSDPFEVQVCR 
Sbjct: 1025 RGNGPRVMLTRQPTEGRARNGGLRVGEMERDCLIAYGASMLIFERLMISSDPFEVQVCRV 1084

Query: 3289 CGMLGYFNHKVKTSVCSSCKNGDNISTMKLPYACKLLFQELQSMNVVPRLKLTEA 3453
            CG+LGYFN K++  +CS+CKNGDNISTMKLPYACKLL QELQSMN+VPRLKL EA
Sbjct: 1085 CGLLGYFNQKLRAGICSTCKNGDNISTMKLPYACKLLIQELQSMNIVPRLKLAEA 1139


>ref|XP_002321356.1| predicted protein [Populus trichocarpa] gi|222868352|gb|EEF05483.1|
            predicted protein [Populus trichocarpa]
          Length = 1141

 Score = 1776 bits (4599), Expect = 0.0
 Identities = 878/1143 (76%), Positives = 1000/1143 (87%), Gaps = 10/1143 (0%)
 Frame = +1

Query: 55   INKQ-HLAAPIKSAVDKFQLLPEFLKVRGLVKQHLDSFNYFIETGIKKVVHANNIITSIV 231
            I+KQ H AAP+KSAVDKFQLLPEFLK RGLVKQHLDSFNYFI  GIKK+V AN+ I S V
Sbjct: 4    IDKQKHAAAPVKSAVDKFQLLPEFLKGRGLVKQHLDSFNYFINIGIKKIVRANDRIVSTV 63

Query: 232  DPGLYLKYTDVRIGDPSIKLDHAVKQLTPHMCRLSDITYAASILVDIEYTTGAGVNNLKR 411
            DP LYL++TDV+IG PS+ +D   +Q+TPHMCRLSD TYAA ILV+IEY +G+  +  K 
Sbjct: 64   DPSLYLRFTDVKIGKPSMVVDAISEQITPHMCRLSDTTYAAPILVNIEYISGS--HGRKE 121

Query: 412  KVERKNVEIGRLPIMLRSHKCILYGKDEAELAKLRECPLDPGGYFVVKGTEKVVLIQEQL 591
            K+ + +V IGR+PIMLRS  C+LYGK+EAELA+L ECPLDPGGYFVVKGTEKV+LIQEQL
Sbjct: 122  KMIKNDVVIGRMPIMLRSCCCVLYGKNEAELARLGECPLDPGGYFVVKGTEKVILIQEQL 181

Query: 592  SKNRIIIDSDRKGRLMAXXXXXXXXXXXXXNLIMDKEKIYLELNAFEKVVPIMVVMKAMG 771
            SKNRIIID+D+KG + A              ++M+KEK+YL LN F K +PIMVVMKAMG
Sbjct: 182  SKNRIIIDNDKKGNINASVTSSTEATKSKTVILMEKEKMYLCLNQFAKKIPIMVVMKAMG 241

Query: 772  MESDQEVVQMLGRDPRYATLLLPSIQECVKENVHTQQQALEFLDKRVRKFLYNSNVSQ-E 948
            MESDQEVVQM+GRDPRY+ LLLPSI+EC    V+TQQQALE+L+  V++  Y+S+ ++ E
Sbjct: 242  MESDQEVVQMVGRDPRYSALLLPSIEECASHGVYTQQQALEYLEAMVKRSTYSSSSTEKE 301

Query: 949  GRALIVLRDVFIANVPVHQHNFRPKCMYVAVMLRRMMEAYLNKDAMDDKDYVGNKRLELS 1128
             RAL +LRDVFIANVPV ++NFRPKC+YVAVMLRRMMEA LNKDAMDDKDYVGNKRLELS
Sbjct: 302  NRALAILRDVFIANVPVRKNNFRPKCIYVAVMLRRMMEALLNKDAMDDKDYVGNKRLELS 361

Query: 1129 GQLISLLFEDLFKTANSDIKKRVDAVLAK--RSTQFDFLQYIKGDIITRGLENAMATGNW 1302
            GQLISLLFEDLFKT  ++++K  D +L K  RS++FDF QYI  D IT GLE A++TGNW
Sbjct: 362  GQLISLLFEDLFKTMITEVQKTADTLLVKQNRSSRFDFSQYIVRDSITNGLERALSTGNW 421

Query: 1303 DLKRFKMHRKGMTQVLARLSFIASLGHMTKIQPQFEKSRKVSGPRALQPSQWGMLCPCDT 1482
            D+KRF+M+RKG+TQVL RLS++ASLGHMT+I PQFEKSRKVSGPRALQPSQWGMLCPCDT
Sbjct: 422  DVKRFRMNRKGVTQVLVRLSYMASLGHMTRISPQFEKSRKVSGPRALQPSQWGMLCPCDT 481

Query: 1483 PEGESCGLVKNLALMTHVTTDEEDGPLVSLCRSLGVEDLELMSGEELHSANSFLVICNGL 1662
            PEGE+CGLVKNLALMTHVTTDEE+ PL+SLC+ LGVEDLEL+SGEELH+ NSFLVI NGL
Sbjct: 482  PEGEACGLVKNLALMTHVTTDEEESPLISLCKCLGVEDLELLSGEELHTPNSFLVIFNGL 541

Query: 1663 ILGKHRKPQHFANALRKLRRAGRIGDFVSVFVNEKQRCLYIASDGGRVCRPLVVADKGVS 1842
            ILGKHR+PQ FANA+RKLRRAG+IG+FVSVFVNEKQR +YIASDGGRVCRPLV+ADKGVS
Sbjct: 542  ILGKHRRPQQFANAMRKLRRAGKIGEFVSVFVNEKQRAVYIASDGGRVCRPLVIADKGVS 601

Query: 1843 RIKEHHMKELRDGARTFNDFLREGLIEYLDVNEQNNALIALYDGEAEPETTHIEIEPFTI 2022
            RIKEHHM+EL DGARTF+DFL EGLIEYLDVNE+NNALIALY+ EA PETTHIEIEPFTI
Sbjct: 602  RIKEHHMRELMDGARTFDDFLHEGLIEYLDVNEENNALIALYEWEATPETTHIEIEPFTI 661

Query: 2023 LGVCAGLIPFPHHNQSPRNTYQCAMGKQAMGNIAYNQLDRMDSLLYLLVYPQRPLLTTKT 2202
            LGV AGLIP+PHHNQSPRNTYQCAMGKQAMGNIAYNQ  RMDSLLYLLVYPQRPLLTT+T
Sbjct: 662  LGVVAGLIPYPHHNQSPRNTYQCAMGKQAMGNIAYNQASRMDSLLYLLVYPQRPLLTTRT 721

Query: 2203 IELVGYDKLGAGQNATVAVMSYSGYDIEDAIVMNKASLDRGFGRCIVMKKLSAVCQKYPN 2382
            IELVGYDKLGAGQNATVAVMSYSGYDIEDAIVMNKASLDRGFGRCIV+KK +   QKY N
Sbjct: 722  IELVGYDKLGAGQNATVAVMSYSGYDIEDAIVMNKASLDRGFGRCIVLKKYTCTNQKYEN 781

Query: 2383 NSMDRIVRPQRVGRDAERTQLLDDDGLASPGEIIRPYDIYINKQSPINTKSTYESSKGLP 2562
             + DRI+RP+   ++ ER ++LDDDGLA+PGEIIR  DIYINK+SPI T+   +S+  L 
Sbjct: 782  GASDRILRPR---KNEERERVLDDDGLAAPGEIIRHGDIYINKESPIETRGPLKSAAALA 838

Query: 2563 DNAYKPSIQTYKGARGETAVVDRVQLNSDKDNNLCFRFIIRHTRRPEVGDKFSSRHGQKG 2742
            D  Y+P  Q +KG  GE+ VVDRV L SDK+NNLC ++ IRHTRRPEVGDKFSSRHGQKG
Sbjct: 839  DVKYRPCAQIFKGTEGESCVVDRVALCSDKNNNLCIKYKIRHTRRPEVGDKFSSRHGQKG 898

Query: 2743 VCGTIIQQEDFPFSERGICPDLIMNPHGFPSRMTIGKMIELLGGKAGVSCGRFHYGSAFG 2922
            VCGTIIQQEDFPFSERGICPDLIMNPHGFPSRMT+GKMIELLGGKAGVSCGRFHYGSAFG
Sbjct: 899  VCGTIIQQEDFPFSERGICPDLIMNPHGFPSRMTVGKMIELLGGKAGVSCGRFHYGSAFG 958

Query: 2923 EPSGHADRVEAIS------ETLVKNGFSYSGKDFIYSGITGCPLQAYIFMGPIYYQKLKH 3084
            EPSGHADRVEAI       ETLVK+GFSY+GKDFIYSGITGCPLQAYIFMGPIYYQKLKH
Sbjct: 959  EPSGHADRVEAIRHFLSLIETLVKHGFSYNGKDFIYSGITGCPLQAYIFMGPIYYQKLKH 1018

Query: 3085 MVLDKMHARARGPRVMLTRQPTEGRSRDGGLRLGEMERDCLIAYGASMLIFERLMISSDP 3264
            MVLDKMHAR  GPRVMLTRQPT+GR+R+GGLR+GEME+DCL+AYG SML++ERLM+SSD 
Sbjct: 1019 MVLDKMHARGSGPRVMLTRQPTDGRARNGGLRVGEMEKDCLVAYGTSMLLYERLMVSSDQ 1078

Query: 3265 FEVQVCRACGMLGYFNHKVKTSVCSSCKNGDNISTMKLPYACKLLFQELQSMNVVPRLKL 3444
            FE QVCRACG+LGY+N K+K ++C++CKNGD +STMKLPYACKLL QELQSMN+VPRLKL
Sbjct: 1079 FEAQVCRACGLLGYYNQKLKAAMCTTCKNGDKVSTMKLPYACKLLIQELQSMNIVPRLKL 1138

Query: 3445 TEA 3453
             EA
Sbjct: 1139 AEA 1141


>ref|XP_004141655.1| PREDICTED: DNA-directed RNA polymerase III subunit RPC2-like [Cucumis
            sativus]
          Length = 1158

 Score = 1774 bits (4595), Expect = 0.0
 Identities = 869/1137 (76%), Positives = 996/1137 (87%), Gaps = 4/1137 (0%)
 Frame = +1

Query: 55   INKQHLAAPIKSAVDKFQLLPEFLKVRGLVKQHLDSFNYFIETGIKKVVHANNIITSIVD 234
            I+KQ +  PIKSAVDKFQLLPEFLKVRGLVKQHLDSFNYF+ T IKK+V AN+ I S  D
Sbjct: 26   IDKQFIGLPIKSAVDKFQLLPEFLKVRGLVKQHLDSFNYFVNTEIKKIVKANDRIESSTD 85

Query: 235  PGLYLKYTDVRIGDPSIKLDHAVKQLTPHMCRLSDITYAASILVDIEYTTGAGVNNLKRK 414
            P +YL++ DVRIG+PS+ ++   + + PHMCRLSD+TYAA ILVDIEY   +      R 
Sbjct: 86   PSIYLRFLDVRIGEPSVTVNAVSETINPHMCRLSDLTYAAPILVDIEYIEESHAQKAPR- 144

Query: 415  VERKNVEIGRLPIMLRSHKCILYGKDEAELAKLRECPLDPGGYFVVKGTEKVVLIQEQLS 594
             E+K+V IGR+PIMLRS  C+L+GKDEAELA+L ECPLDPGGYF++KGTEKVVLIQEQLS
Sbjct: 145  -EKKDVVIGRMPIMLRSRCCVLHGKDEAELARLGECPLDPGGYFIIKGTEKVVLIQEQLS 203

Query: 595  KNRIIIDSDRKGRLMAXXXXXXXXXXXXXNLIMDKEKIYLELNAFEKV-VPIMVVMKAMG 771
            KNRIIID+D+KG + A              + M+ EKIYL+LN F    +PIMVV+KAMG
Sbjct: 204  KNRIIIDTDKKGNINASVTSSTEATKSKTVIKMENEKIYLQLNIFTTPKIPIMVVLKAMG 263

Query: 772  MESDQEVVQMLGRDPRYATLLLPSIQECVKENVHTQQQALEFLDKRVRKFLYNSNVSQ-E 948
            MES QEVVQM+GRDPRY  LLLPSI+EC KE ++TQ+QALE+L+ +V+KF + S   + E
Sbjct: 264  MESIQEVVQMVGRDPRYGALLLPSIEECAKEKIYTQEQALEYLETKVKKFQFASAPPEKE 323

Query: 949  GRALIVLRDVFIANVPVHQHNFRPKCMYVAVMLRRMMEAYLNKDAMDDKDYVGNKRLELS 1128
            GRAL +LRDVF+ANVPV+++NF PKC+YVAVM+RRMM+A L+KDAMDDKDYVGNKRLELS
Sbjct: 324  GRALGILRDVFLANVPVYKNNFHPKCIYVAVMMRRMMDAILSKDAMDDKDYVGNKRLELS 383

Query: 1129 GQLISLLFEDLFKTANSDIKKRVDAVLAK--RSTQFDFLQYIKGDIITRGLENAMATGNW 1302
            GQLISLLFEDLFKT  S++KK +D +L K  RS++FDF Q++  +II+ GLE  ++TGNW
Sbjct: 384  GQLISLLFEDLFKTMVSEVKKTIDKLLGKHSRSSRFDFSQHLNSNIISFGLERTLSTGNW 443

Query: 1303 DLKRFKMHRKGMTQVLARLSFIASLGHMTKIQPQFEKSRKVSGPRALQPSQWGMLCPCDT 1482
            D+KRF+MHRKGM+QVLARLSFI+++GH+T++ PQFEKSRKVSGPRALQPSQWGMLCPCDT
Sbjct: 444  DVKRFRMHRKGMSQVLARLSFISTMGHVTRVSPQFEKSRKVSGPRALQPSQWGMLCPCDT 503

Query: 1483 PEGESCGLVKNLALMTHVTTDEEDGPLVSLCRSLGVEDLELMSGEELHSANSFLVICNGL 1662
            PEGE+CGLVKNLALMTHVTTD+E+GPL+SLC  LGVEDLEL+S EELH+ NSFLVI NG 
Sbjct: 504  PEGEACGLVKNLALMTHVTTDQEEGPLISLCYCLGVEDLELLSAEELHTPNSFLVIFNGR 563

Query: 1663 ILGKHRKPQHFANALRKLRRAGRIGDFVSVFVNEKQRCLYIASDGGRVCRPLVVADKGVS 1842
            ILGKHR+PQ+FA  +R LRRAG+IG+FVSVFVNEKQ C+YIASDGGRVCRPLV+ADKGVS
Sbjct: 564  ILGKHRRPQYFATGMRMLRRAGKIGEFVSVFVNEKQHCVYIASDGGRVCRPLVIADKGVS 623

Query: 1843 RIKEHHMKELRDGARTFNDFLREGLIEYLDVNEQNNALIALYDGEAEPETTHIEIEPFTI 2022
            RIKE+HMKEL DG RTF+DFLR+GLIEYLDVNE+NNALIALY+GEA PETTHIEIEPFTI
Sbjct: 624  RIKEYHMKELSDGVRTFDDFLRDGLIEYLDVNEENNALIALYEGEATPETTHIEIEPFTI 683

Query: 2023 LGVCAGLIPFPHHNQSPRNTYQCAMGKQAMGNIAYNQLDRMDSLLYLLVYPQRPLLTTKT 2202
            LGV AGLIP+PHHNQSPRNTYQCAMGKQAMGNIAYNQL RMD+LLYLLVYPQRPLLTTKT
Sbjct: 684  LGVVAGLIPYPHHNQSPRNTYQCAMGKQAMGNIAYNQLRRMDTLLYLLVYPQRPLLTTKT 743

Query: 2203 IELVGYDKLGAGQNATVAVMSYSGYDIEDAIVMNKASLDRGFGRCIVMKKLSAVCQKYPN 2382
            IELVGYDKLGAGQNATVAVMSYSGYDIEDAIVMNK+SLDRGFGRCIV KK S+V QKY N
Sbjct: 744  IELVGYDKLGAGQNATVAVMSYSGYDIEDAIVMNKSSLDRGFGRCIVFKKYSSVNQKYEN 803

Query: 2383 NSMDRIVRPQRVGRDAERTQLLDDDGLASPGEIIRPYDIYINKQSPINTKSTYESSKGLP 2562
            N+ DRIVRP R        Q+LDDDGLA+PGEIIRP DIY+NKQSPI  K +     G+P
Sbjct: 804  NTADRIVRPNRNEDFTGNMQILDDDGLAAPGEIIRPNDIYVNKQSPIIMKGS--PLPGIP 861

Query: 2563 DNAYKPSIQTYKGARGETAVVDRVQLNSDKDNNLCFRFIIRHTRRPEVGDKFSSRHGQKG 2742
            DNAY+P  Q +KG+ GE  VVDRV L++DK++ LC +F+IR TRRPE+GDKFSSRHGQKG
Sbjct: 862  DNAYRPCRQIFKGSEGEPTVVDRVALSTDKNDCLCIKFLIRQTRRPELGDKFSSRHGQKG 921

Query: 2743 VCGTIIQQEDFPFSERGICPDLIMNPHGFPSRMTIGKMIELLGGKAGVSCGRFHYGSAFG 2922
            VCGTI+QQEDFPFSERGICPDLIMNPHGFPSRMT+GKMIELLGGKAGVSCGRFHYGSAFG
Sbjct: 922  VCGTIVQQEDFPFSERGICPDLIMNPHGFPSRMTVGKMIELLGGKAGVSCGRFHYGSAFG 981

Query: 2923 EPSGHADRVEAISETLVKNGFSYSGKDFIYSGITGCPLQAYIFMGPIYYQKLKHMVLDKM 3102
            EPSGHAD+V+AISETL+K GFSY+GKDF+YSGITGCPLQAYIFMGPIYYQKLKHMVLDKM
Sbjct: 982  EPSGHADKVDAISETLIKRGFSYNGKDFLYSGITGCPLQAYIFMGPIYYQKLKHMVLDKM 1041

Query: 3103 HARARGPRVMLTRQPTEGRSRDGGLRLGEMERDCLIAYGASMLIFERLMISSDPFEVQVC 3282
            HAR  GPRVMLTRQPTEGR+R+GGLR+GEMERDCLIAYGASMLI+ERLMISSDPFEVQVC
Sbjct: 1042 HARGSGPRVMLTRQPTEGRARNGGLRVGEMERDCLIAYGASMLIYERLMISSDPFEVQVC 1101

Query: 3283 RACGMLGYFNHKVKTSVCSSCKNGDNISTMKLPYACKLLFQELQSMNVVPRLKLTEA 3453
            R CG+LGY+NHK+KT +CSSCKNGDNISTMKLPYACKLL QELQSMN+VPRLKL EA
Sbjct: 1102 RVCGLLGYYNHKLKTGICSSCKNGDNISTMKLPYACKLLIQELQSMNIVPRLKLAEA 1158


>ref|XP_003529060.1| PREDICTED: DNA-directed RNA polymerase III subunit RPC2-like [Glycine
            max]
          Length = 1152

 Score = 1724 bits (4466), Expect = 0.0
 Identities = 850/1134 (74%), Positives = 978/1134 (86%), Gaps = 6/1134 (0%)
 Frame = +1

Query: 70   LAAPIKSAVDKFQLLPEFLKVRGLVKQHLDSFNYFIETGIKKVVHANNIITSIVDPGLYL 249
            L APIKSAVDKFQLLPEFLKVRGLVKQHLDSFNYF+ T IKK+V AN++I +   P +YL
Sbjct: 36   LTAPIKSAVDKFQLLPEFLKVRGLVKQHLDSFNYFVRTDIKKIVRANDLIVASRYPHIYL 95

Query: 250  KYTDVRIGDPSIKLDHAVKQLTPHMCRLSDITYAASILVDIEYTTGAGVN-NLKRKVERK 426
            ++ +V IG PSI +D   + LTP  CRLSD+TYAA I  D+EYT G+    ++KRK++  
Sbjct: 96   RFLNVGIGKPSIMIDEVTEDLTPQTCRLSDLTYAAPICADVEYTLGSHDKPDIKRKLK-- 153

Query: 427  NVEIGRLPIMLRSHKCILYGKDEAELAKLRECPLDPGGYFVVKGTEKVVLIQEQLSKNRI 606
             VEIGR+PIMLRS  C+L+G+DEAELAKL ECPLDPGGYFV+KGTEKV+LIQEQLSKNRI
Sbjct: 154  -VEIGRMPIMLRSCCCVLHGRDEAELAKLGECPLDPGGYFVIKGTEKVILIQEQLSKNRI 212

Query: 607  IIDSDRKGRLMAXXXXXXXXXXXXXNLIMDKEKIYLELNAFEKVVPIMVVMKAMGMESDQ 786
            IID+D+KG + A              ++M+KEK++L+LN F K VP+MVVMKAMGMESDQ
Sbjct: 213  IIDTDKKGNITASVTSSTEKIKTKTVVVMEKEKLWLQLNKFPKKVPLMVVMKAMGMESDQ 272

Query: 787  EVVQMLGRDPRYATLLLPSIQECVKENVHTQQQALEFLDKRVRKFLYNSNVSQEGRALIV 966
            EV QM+GRDPRY+ LLLPSI+EC K  V+T++QALE+LDK             EG A   
Sbjct: 273  EVTQMVGRDPRYSFLLLPSIEECTKCKVYTREQALEYLDKL------------EGAAFSA 320

Query: 967  LRDVFIANVPVHQHNFRPKCMYVAVMLRRMMEAYLNKDAMDDKDYVGNKRLELSGQLISL 1146
            LRDVF+ANVPV Q NFRPKC+YVAVM+RR+M+A LNKDAMDDKDYVGNKRLELSGQLISL
Sbjct: 321  LRDVFLANVPVDQDNFRPKCIYVAVMMRRIMDAILNKDAMDDKDYVGNKRLELSGQLISL 380

Query: 1147 LFEDLFKTANSDIKKRVDAVLAK--RSTQFDFLQYIKG--DIITRGLENAMATGNWDLKR 1314
            LFEDLFK+  +++K   D +L K  ++  FD    +     IIT GLE  ++TGN+++KR
Sbjct: 381  LFEDLFKSMTTEVKNLTDKMLEKPDKAKNFDICTLLTRTRSIITLGLERTLSTGNFEIKR 440

Query: 1315 FKMHRKGMTQVLARLSFIASLGHMTKIQPQFEKSRKVSGPRALQPSQWGMLCPCDTPEGE 1494
            F+M RKGMTQVL RLSFI +LGHMT++ PQFEKSRKVSGPRALQPSQWGMLCPCDTPEGE
Sbjct: 441  FRMERKGMTQVLQRLSFIGALGHMTRVSPQFEKSRKVSGPRALQPSQWGMLCPCDTPEGE 500

Query: 1495 SCGLVKNLALMTHVTTDEEDGPLVSLCRSLGVEDLELMSGEELHSANSFLVICNGLILGK 1674
            SCGLVKNLALMTHVTTDEE+ PL+SLC SLGVED++ +S EELH+ +SFLVI NGLILGK
Sbjct: 501  SCGLVKNLALMTHVTTDEEEKPLISLCESLGVEDMKDLSAEELHTPDSFLVIFNGLILGK 560

Query: 1675 HRKPQHFANALRKLRRAGRIGDFVSVFVNEKQRCLYIASDGGRVCRPLVVADKGVSRIKE 1854
            HR+P HFA A+RKLRRAG+IG+FVSV+VNEKQ C+Y+ASDGGRVCRPLV+ADKG+SRIK+
Sbjct: 561  HRRPLHFATAIRKLRRAGKIGEFVSVYVNEKQHCVYLASDGGRVCRPLVIADKGISRIKQ 620

Query: 1855 HHMKELRDGARTFNDFLREGLIEYLDVNEQNNALIALYDGEAEPETTHIEIEPFTILGVC 2034
            HHMKEL DG RTF+DFLR+GL+EYLDVNE+NNALIALY+G+A  ETTHIEIEPFTILGV 
Sbjct: 621  HHMKELMDGVRTFDDFLRDGLLEYLDVNEENNALIALYEGDATSETTHIEIEPFTILGVI 680

Query: 2035 AGLIPFPHHNQSPRNTYQCAMGKQAMGNIAYNQLDRMDSLLYLLVYPQRPLLTTKTIELV 2214
            AGLIP+PHHNQSPRNTYQCAMGKQAMGNIA+NQL RMDSLLYLLVYPQRPLLTTKTIELV
Sbjct: 681  AGLIPYPHHNQSPRNTYQCAMGKQAMGNIAFNQLRRMDSLLYLLVYPQRPLLTTKTIELV 740

Query: 2215 GYDKLGAGQNATVAVMSYSGYDIEDAIVMNKASLDRGFGRCIVMKKLSAVCQKYPNNSMD 2394
            GYDKLGAGQNATVAVMSYSGYDIEDAIVMNKASLDRGFGRCIVMKK +A+ QK+ N++ D
Sbjct: 741  GYDKLGAGQNATVAVMSYSGYDIEDAIVMNKASLDRGFGRCIVMKKYNAIIQKHSNDTSD 800

Query: 2395 RIVRPQRVGRDAERTQLLDDDGLASPGEIIRPYDIYINKQSPINTKSTYE-SSKGLPDNA 2571
            RI+RP R    A R Q+LDDDG+A+PGEI+RPYDIYINKQSPI+T++    S+  LPD+A
Sbjct: 801  RILRPNRTADTAGRMQILDDDGIAAPGEILRPYDIYINKQSPIDTRTPKTGSAANLPDSA 860

Query: 2572 YKPSIQTYKGARGETAVVDRVQLNSDKDNNLCFRFIIRHTRRPEVGDKFSSRHGQKGVCG 2751
            Y+ + Q++KG  GE  VVDRV L SDKDNN+C +F+IRHTRRPE+GDKFSSRHGQKGVCG
Sbjct: 861  YRSNAQSFKGNGGE--VVDRVVLCSDKDNNMCIKFLIRHTRRPELGDKFSSRHGQKGVCG 918

Query: 2752 TIIQQEDFPFSERGICPDLIMNPHGFPSRMTIGKMIELLGGKAGVSCGRFHYGSAFGEPS 2931
            TI+ QEDFPFSE+GICPDLIMNPHGFPSRMT+GKMIELLGGKAGVSCGRFHYGSAFGE S
Sbjct: 919  TIVPQEDFPFSEKGICPDLIMNPHGFPSRMTVGKMIELLGGKAGVSCGRFHYGSAFGERS 978

Query: 2932 GHADRVEAISETLVKNGFSYSGKDFIYSGITGCPLQAYIFMGPIYYQKLKHMVLDKMHAR 3111
            GHAD+VE ISETLV  GF+YSGKDFIYSGITGCPLQAYIFMGPIYYQKLKHMVLDKMHAR
Sbjct: 979  GHADKVETISETLVSKGFNYSGKDFIYSGITGCPLQAYIFMGPIYYQKLKHMVLDKMHAR 1038

Query: 3112 ARGPRVMLTRQPTEGRSRDGGLRLGEMERDCLIAYGASMLIFERLMISSDPFEVQVCRAC 3291
              GPRVMLTRQPTEGR+R+GGLR+GEMERDCLIAYGASMLI+ERLM+SSDPFEVQVC AC
Sbjct: 1039 GSGPRVMLTRQPTEGRARNGGLRVGEMERDCLIAYGASMLIYERLMLSSDPFEVQVCTAC 1098

Query: 3292 GMLGYFNHKVKTSVCSSCKNGDNISTMKLPYACKLLFQELQSMNVVPRLKLTEA 3453
            G+LGY+NHK+KT +CSSCKNGDNISTMKLPYACKL+ QELQSMN+VPRLKL +A
Sbjct: 1099 GLLGYYNHKLKTGICSSCKNGDNISTMKLPYACKLMIQELQSMNIVPRLKLADA 1152