BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00004471
         (537 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN74740.1| hypothetical protein VITISV_040899 [Vitis vinifera]    94   1e-17
ref|XP_003628780.1| F-box family protein [Medicago truncatula] g...    94   1e-17
emb|CBI32919.3| unnamed protein product [Vitis vinifera]               88   7e-16
gb|AFK40721.1| unknown [Lotus japonicus]                               86   3e-15
ref|XP_003532284.1| PREDICTED: F-box/FBD/LRR-repeat protein At4g...    85   6e-15

>emb|CAN74740.1| hypothetical protein VITISV_040899 [Vitis vinifera]
          Length = 607

 Score = 94.4 bits (233), Expect = 1e-17
 Identities = 60/145 (41%), Positives = 84/145 (57%), Gaps = 6/145 (4%)
 Frame = +3

Query: 117 QDMISTLPDPILHHILSFLEMRYVLQTCILSKRWTKLWTTLPFLTFDRQTY-NNTIPFKT 293
           +D+IS LPD +L HILSFL  ++ + T ILSKRW  LW ++P L FD + + N +   + 
Sbjct: 9   RDIISNLPDELLCHILSFLPTKFAVGTSILSKRWRYLWASVPILDFDDELWLNPSTLVEL 68

Query: 294 EEEFIDFVHKV--LLTRHQFSSIHTLRLSYFHVNGD---TWLGIAVQQNVQQLDLFIEFD 458
           EE  I F + V  +L   + S I   RL Y   N D   +W+ IA+++ VQ+LDL +  D
Sbjct: 69  EERIIMFQNFVDGVLRHSEVSCIKKFRLGYRDNNLDSVYSWICIALERRVQELDLHLLID 128

Query: 459 YINFELPYYLVNCNTLVVLKLDIVL 533
           +   ELP     C TLVV+KL   L
Sbjct: 129 W-RVELPPMFFICKTLVVVKLSCAL 152


>ref|XP_003628780.1| F-box family protein [Medicago truncatula]
           gi|355522802|gb|AET03256.1| F-box family protein
           [Medicago truncatula]
          Length = 451

 Score = 94.0 bits (232), Expect = 1e-17
 Identities = 61/150 (40%), Positives = 76/150 (50%), Gaps = 7/150 (4%)
 Frame = +3

Query: 93  NNKKKKAKQDMISTLPDPILHHILSFLEMRYVLQTCILSKRWTKLWTTLPFLTFDRQTYN 272
           NN      +D IS LPD IL HILS LE ++ +QT ILS RW  LW  LP L        
Sbjct: 71  NNHNHTENKDRISDLPDCILFHILSSLETKHAVQTTILSTRWNNLWKRLPTLRL------ 124

Query: 273 NTIPFKTEEEFIDFVHKVLLTRHQFSSIHTLRLSYFHVNG-------DTWLGIAVQQNVQ 431
           N+  FKT + F  FV +VL  R   +++HTL   YF   G          +  A   NVQ
Sbjct: 125 NSSHFKTLKSFTKFVSRVLSLRDDSTALHTL---YFQRKGCVEPPILSKLVEYAASHNVQ 181

Query: 432 QLDLFIEFDYINFELPYYLVNCNTLVVLKL 521
           +LD+F+  D + F  P Y   CNTL  L L
Sbjct: 182 RLDIFVRCDGVYF--PPYFFKCNTLTSLNL 209


>emb|CBI32919.3| unnamed protein product [Vitis vinifera]
          Length = 411

 Score = 88.2 bits (217), Expect = 7e-16
 Identities = 60/148 (40%), Positives = 81/148 (54%), Gaps = 8/148 (5%)
 Frame = +3

Query: 117 QDMISTLPDPILHHILSFLEMRYVLQTCILSKRWTKLWTTLPFLTFDRQ-TYNNTIPFKT 293
           +D IS LPD +L HI+SFL  ++ + T +LSKRW  LW ++P L FD     +   P   
Sbjct: 9   RDRISNLPDAVLCHIISFLPTKFAVGTSVLSKRWRYLWASIPNLDFDDDLLLDRDKPIGD 68

Query: 294 EEE---FIDFVHKVLLTRHQFSSIHTLRLSYFHVNGD----TWLGIAVQQNVQQLDLFIE 452
            E    F +FV KVLL     S I   RL       D    +W+  A+++NVQ+LDL+ +
Sbjct: 69  SERSICFKNFVDKVLL-HGSISCIRKFRLKCSDHELDSAVNSWICTALERNVQELDLYFD 127

Query: 453 FDYINFELPYYLVNCNTLVVLKLDIVLQ 536
            +Y   ELP     C TLVVLKL  VL+
Sbjct: 128 TEY-PIELPPKFFFCKTLVVLKLCPVLE 154


>gb|AFK40721.1| unknown [Lotus japonicus]
          Length = 394

 Score = 86.3 bits (212), Expect = 3e-15
 Identities = 56/154 (36%), Positives = 81/154 (52%), Gaps = 13/154 (8%)
 Frame = +3

Query: 102 KKKAKQDMISTLPDPILHHILSFLEMRYVLQTCILSKRWTKLWTTLPFLTF-DRQTYNNT 278
           KK   +D  S+LPDPIL HILS L  +  + T ILSKRW  LW ++P L F D   Y   
Sbjct: 2   KKMKMEDRFSSLPDPILCHILSLLTTKEAVTTSILSKRWIPLWRSVPTLDFDDSNLYGGD 61

Query: 279 IPFKTEEEFIDFVHKVLLTRHQFSSIHTLRLSYFH-----VNGDTWLGIAVQQNVQQLDL 443
              +    F++ V+KV+L R     I   RL          N   W+ + +++ V+ +D+
Sbjct: 62  ---EVYARFVEAVYKVILARDFNQPIKKFRLVLTERLKDPANISVWVNLVLKRRVEHIDI 118

Query: 444 FIEFDYINF-ELPYYLV------NCNTLVVLKLD 524
            + F+   F ELP+ +V      +C TLVVLKL+
Sbjct: 119 SLHFEDDEFLELPHIVVDTPSMFSCTTLVVLKLE 152


>ref|XP_003532284.1| PREDICTED: F-box/FBD/LRR-repeat protein At4g26340-like [Glycine
           max]
          Length = 380

 Score = 85.1 bits (209), Expect = 6e-15
 Identities = 53/140 (37%), Positives = 73/140 (52%), Gaps = 5/140 (3%)
 Frame = +3

Query: 117 QDMISTLPDPILHHILSFLEMRYVLQTCILSKRWTKLWTTLPFLTFDRQTYNNTIPFKTE 296
           +D IS LPD +L HILSFL  +  + T ILSKRW  LW ++P L F+    +N    +T 
Sbjct: 2   EDRISNLPDAVLCHILSFLPTKQSIVTSILSKRWKALWRSVPALHFEESLMDNNNDIETH 61

Query: 297 EEFIDFVHKVLLTR---HQFSSIHTLRLSYF--HVNGDTWLGIAVQQNVQQLDLFIEFDY 461
             F+  V+   L+R     F   H +  S+    VN   W+  A+Q+ V+ L L +    
Sbjct: 62  ARFVQSVYAFTLSRDMDQPFRRFHLVSRSFLCNPVNVIAWVSAALQRRVENLCLSLT-PL 120

Query: 462 INFELPYYLVNCNTLVVLKL 521
               LP  L +C TLVVLKL
Sbjct: 121 TKMVLPSALFSCKTLVVLKL 140