BLASTX nr result
ID: Coptis23_contig00004463
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Coptis23_contig00004463
(1843 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_004145339.1| PREDICTED: probable E3 ubiquitin-protein lig... 741 0.0
ref|XP_002519105.1| Protein ariadne-1, putative [Ricinus communi... 729 0.0
ref|XP_002313070.1| predicted protein [Populus trichocarpa] gi|2... 714 0.0
ref|XP_002284665.1| PREDICTED: probable E3 ubiquitin-protein lig... 737 0.0
ref|XP_003537904.1| PREDICTED: probable E3 ubiquitin-protein lig... 702 0.0
>ref|XP_004145339.1| PREDICTED: probable E3 ubiquitin-protein ligase ARI1-like [Cucumis
sativus] gi|449471519|ref|XP_004153333.1| PREDICTED:
probable E3 ubiquitin-protein ligase ARI1-like [Cucumis
sativus] gi|449502370|ref|XP_004161621.1| PREDICTED:
probable E3 ubiquitin-protein ligase ARI1-like [Cucumis
sativus]
Length = 589
Score = 741 bits (1913), Expect(2) = 0.0
Identities = 339/438 (77%), Positives = 386/438 (88%), Gaps = 1/438 (0%)
Frame = +2
Query: 2 DRLFAEAGVTVLESRSHFTSQSRSEETCYICMEDIPIEQVTTMDCGHCFCNNCWTEHFIV 181
+ LFA AGVT++E+RS+ +S++ S C ICME++ T +DCGHCFCNNCWTEHFIV
Sbjct: 92 NHLFATAGVTMIENRSNTSSEASSMVMCDICMEEVHGNDATRVDCGHCFCNNCWTEHFIV 151
Query: 182 KINEGQSRRIRCMAHKCNAICDEAIVRNLVNARDPDLAERFERFLLESYIEDNTMVKWCP 361
KINEGQSRRIRCMAHKCNAICDEA+VR LV+ R PDLA +F+RFLLESYIEDN VKWCP
Sbjct: 152 KINEGQSRRIRCMAHKCNAICDEAVVRTLVSKRHPDLANKFDRFLLESYIEDNKRVKWCP 211
Query: 362 SVPHCGNAIRVEDEIYCEVECACGLQFCFGCSSEAHSPCSCLMWKLWAKKCKDESETVNW 541
S PHCGNAIRVED+ +CEVEC+CGLQFCF C SEAHSPCSCLMW+LW KKC+DESETVNW
Sbjct: 212 STPHCGNAIRVEDDEFCEVECSCGLQFCFSCLSEAHSPCSCLMWELWIKKCRDESETVNW 271
Query: 542 MTVNTKPCPKCYKPVEKNGGCNLVSCICGQPFCWVCGGATGRDHTWTSISGHSCGRYKED 721
+TV+TKPCPKC+KPVEKNGGCNLVSCICGQ FCW+CGGATGR+HTW+SISGHSCGRYKE+
Sbjct: 272 ITVHTKPCPKCHKPVEKNGGCNLVSCICGQAFCWLCGGATGREHTWSSISGHSCGRYKEE 331
Query: 722 TEKKAERAKRDLYRYMHYHNHYKAHTDSFKLEAKLKETIQGKISILEDNSTSDKDCSWVT 901
+E+KAERAKRDLYRYMHYHN YKAHTDSFKLE+KLKE+IQ KISI E+ + +D SWV
Sbjct: 332 SEQKAERAKRDLYRYMHYHNRYKAHTDSFKLESKLKESIQEKISISEERESMLRDFSWVN 391
Query: 902 NGLYRLFRSRRVLSYSYPFAYYMFGDDLFKDEMTKEETERKQHLFEDQQQQLESNVEKLS 1081
NGL RLFRSRRVLSYSYPFA+YMFGD+LFKDEMT+ E E KQHLFEDQQQQLE+NVEKLS
Sbjct: 392 NGLSRLFRSRRVLSYSYPFAFYMFGDELFKDEMTEAEREIKQHLFEDQQQQLEANVEKLS 451
Query: 1082 KFIEEPFDTYAMDKVMEIRMQVINLTVITDRLCTKMYECIENDLLGCLQFETHHIAPYKS 1261
KF+EEPFD Y DKVMEIRMQVINL+VITD LC KMY+CIENDLLG L+ H+IAPYKS
Sbjct: 452 KFLEEPFDQYTKDKVMEIRMQVINLSVITDTLCKKMYDCIENDLLGSLELGIHNIAPYKS 511
Query: 1262 KGVEKASELPV-WSTKAD 1312
KG+EKA EL W++KA+
Sbjct: 512 KGIEKALELSACWNSKAN 529
Score = 40.0 bits (92), Expect(2) = 0.0
Identities = 20/41 (48%), Positives = 22/41 (53%)
Frame = +3
Query: 1419 GGTVEHNDPSGTQNNERGCSSRKRTRREARGDGLFDLNLPA 1541
GG E + + E GCSSRKR R E FDLNLPA
Sbjct: 543 GGLSECERLTSLNSEENGCSSRKRARAEVVAGNFFDLNLPA 583
>ref|XP_002519105.1| Protein ariadne-1, putative [Ricinus communis]
gi|223541768|gb|EEF43316.1| Protein ariadne-1, putative
[Ricinus communis]
Length = 592
Score = 729 bits (1882), Expect(2) = 0.0
Identities = 341/437 (78%), Positives = 374/437 (85%), Gaps = 2/437 (0%)
Frame = +2
Query: 8 LFAEAGVTVLESRSHFTS-QSRSEETCYICMEDIPIEQVTTMDCGHCFCNNCWTEHFIVK 184
LF EAGVT +E S S C IC+ED+P + T MDC HCFCN+CWTEHFIVK
Sbjct: 97 LFTEAGVTGVEQLDRDAPLTSSSIIMCDICIEDVPGNRATRMDCSHCFCNDCWTEHFIVK 156
Query: 185 INEGQSRRIRCMAHKCNAICDEAIVRNLVNARDPDLAERFERFLLESYIEDNTMVKWCPS 364
INEGQSRRI+CMAHKCNAICDEA+VRNLV+ R PDLAERF+RFLLESYIEDN MVKWCPS
Sbjct: 157 INEGQSRRIQCMAHKCNAICDEAVVRNLVSKRHPDLAERFDRFLLESYIEDNKMVKWCPS 216
Query: 365 VPHCGNAIRVEDEIYCEVECACGLQFCFGCSSEAHSPCSCLMWKLWAKKCKDESETVNWM 544
PHCGNAIRVE++ CEVEC+CGLQFCF C SEAHSPCSCLMW+LW+KKC+DESETVNW+
Sbjct: 217 APHCGNAIRVEEDECCEVECSCGLQFCFSCLSEAHSPCSCLMWELWSKKCRDESETVNWI 276
Query: 545 TVNTKPCPKCYKPVEKNGGCNLVSCICGQPFCWVCGGATGRDHTWTSISGHSCGRYKEDT 724
TV+TKPCPKC+KPVEKNGGCNLVSCICGQ FCW+CGGATG+DHTW+ ISGHSCGRYKED
Sbjct: 277 TVHTKPCPKCHKPVEKNGGCNLVSCICGQAFCWLCGGATGKDHTWSRISGHSCGRYKEDR 336
Query: 725 EKKAERAKRDLYRYMHYHNHYKAHTDSFKLEAKLKETIQGKISILEDNSTSDKDCSWVTN 904
EKK ERAKRDLYRYMHYHN YKAHTDSFKLE KLKETI K+SI E+ + +D SWVTN
Sbjct: 337 EKKTERAKRDLYRYMHYHNRYKAHTDSFKLETKLKETILEKVSISEEKESRLRDFSWVTN 396
Query: 905 GLYRLFRSRRVLSYSYPFAYYMFGDDLFKDEMTKEETERKQHLFEDQQQQLESNVEKLSK 1084
GL RLFRSRRVLSYSYPFA+YMFGD+LF DEMT EE E KQ+LFEDQQQQLESNVEKLSK
Sbjct: 397 GLCRLFRSRRVLSYSYPFAFYMFGDELFNDEMTVEEREIKQNLFEDQQQQLESNVEKLSK 456
Query: 1085 FIEEPFDTYAMDKVMEIRMQVINLTVITDRLCTKMYECIENDLLGCLQFETHHIAPYKSK 1264
F+EEPF+ Y DKVMEIRMQVINL ITD LC KMYECIENDLLG LQ TH+IAPYKSK
Sbjct: 457 FLEEPFEQYTDDKVMEIRMQVINLCAITDTLCKKMYECIENDLLGSLQLGTHNIAPYKSK 516
Query: 1265 GVEKASEL-PVWSTKAD 1312
G+EKASEL WS K +
Sbjct: 517 GIEKASELSSCWSNKVN 533
Score = 50.1 bits (118), Expect(2) = 0.0
Identities = 25/42 (59%), Positives = 33/42 (78%), Gaps = 1/42 (2%)
Frame = +3
Query: 1419 GGTVEHNDPSGTQNNE-RGCSSRKRTRREARGDGLFDLNLPA 1541
GG+ EH+ PSG+++++ GCSSRKR R+E G G FDLNLPA
Sbjct: 547 GGSSEHDRPSGSRSSDDSGCSSRKRARKE--GGGFFDLNLPA 586
>ref|XP_002313070.1| predicted protein [Populus trichocarpa] gi|222849478|gb|EEE87025.1|
predicted protein [Populus trichocarpa]
Length = 591
Score = 714 bits (1844), Expect(2) = 0.0
Identities = 327/435 (75%), Positives = 373/435 (85%), Gaps = 2/435 (0%)
Frame = +2
Query: 8 LFAEAGVTVLES-RSHFTSQSRSEETCYICMEDIPIEQVTTMDCGHCFCNNCWTEHFIVK 184
LF EAGVTV+E+ S S TC IC+ED + T M+CGHCFCNNCWTEHFI+K
Sbjct: 101 LFTEAGVTVVENVDDEVPPSSSSTITCDICIEDATADNATRMECGHCFCNNCWTEHFIIK 160
Query: 185 INEGQSRRIRCMAHKCNAICDEAIVRNLVNARDPDLAERFERFLLESYIEDNTMVKWCPS 364
INEGQSRRI+CMAH+C+AICDEAIVRNLV+ R P+LAE+F+RFLLESYIEDN MVKWCPS
Sbjct: 161 INEGQSRRIQCMAHRCSAICDEAIVRNLVSRRHPNLAEKFDRFLLESYIEDNKMVKWCPS 220
Query: 365 VPHCGNAIRVEDEIYCEVECACGLQFCFGCSSEAHSPCSCLMWKLWAKKCKDESETVNWM 544
+PHCG AIRVE++ +CEVEC+CGLQFCF C SEAHSPCSCLMW+ W+KKC DESETVNW+
Sbjct: 221 IPHCGKAIRVEEDEFCEVECSCGLQFCFSCLSEAHSPCSCLMWERWSKKCHDESETVNWI 280
Query: 545 TVNTKPCPKCYKPVEKNGGCNLVSCICGQPFCWVCGGATGRDHTWTSISGHSCGRYKEDT 724
TV+TKPCPKCYKPVEKNGGCNLVSCICGQ FCWVCGGATGRDHTW+ I+GHSCGRYKED
Sbjct: 281 TVHTKPCPKCYKPVEKNGGCNLVSCICGQSFCWVCGGATGRDHTWSRIAGHSCGRYKEDR 340
Query: 725 EKKAERAKRDLYRYMHYHNHYKAHTDSFKLEAKLKETIQGKISILEDNSTSDKDCSWVTN 904
EK+ ERAKRDLYRYMHYHN +KAHTDSFKLE+KLKE+I K+S+ E+ KD SWVTN
Sbjct: 341 EKQTERAKRDLYRYMHYHNRFKAHTDSFKLESKLKESILDKVSVAEERELRLKDFSWVTN 400
Query: 905 GLYRLFRSRRVLSYSYPFAYYMFGDDLFKDEMTKEETERKQHLFEDQQQQLESNVEKLSK 1084
GL RLFRSRRVLSYSYPFA+YMFG++ FKDEMT EE E K++LFEDQQQQLESNVEKLS
Sbjct: 401 GLNRLFRSRRVLSYSYPFAFYMFGEEFFKDEMTDEEREIKKNLFEDQQQQLESNVEKLSM 460
Query: 1085 FIEEPFDTYAMDKVMEIRMQVINLTVITDRLCTKMYECIENDLLGCLQFETHHIAPYKSK 1264
F+EEPF ++ DKVM+IRM+VINL+V D LC KMYECIE+DLLG L THHIAPYKSK
Sbjct: 461 FLEEPFQQFSQDKVMDIRMRVINLSVTIDTLCQKMYECIESDLLGSLHLGTHHIAPYKSK 520
Query: 1265 GVEKASEL-PVWSTK 1306
G+E+ASEL W+TK
Sbjct: 521 GIERASELSSCWNTK 535
Score = 47.8 bits (112), Expect(2) = 0.0
Identities = 24/42 (57%), Positives = 31/42 (73%), Gaps = 1/42 (2%)
Frame = +3
Query: 1419 GGTVEHNDPSGT-QNNERGCSSRKRTRREARGDGLFDLNLPA 1541
GGT EH+ PSG+ +++ GCS RKR ++E G G FDLNLPA
Sbjct: 546 GGTSEHDRPSGSGSSDDSGCSYRKRAKKE--GGGFFDLNLPA 585
>ref|XP_002284665.1| PREDICTED: probable E3 ubiquitin-protein ligase ARI1 isoform 1 [Vitis
vinifera] gi|297741410|emb|CBI32541.3| unnamed protein
product [Vitis vinifera]
Length = 589
Score = 737 bits (1902), Expect = 0.0
Identities = 340/427 (79%), Positives = 375/427 (87%)
Frame = +2
Query: 8 LFAEAGVTVLESRSHFTSQSRSEETCYICMEDIPIEQVTTMDCGHCFCNNCWTEHFIVKI 187
LFAEAGV ++E + S S C ICME + + T MDCGHCFCNNCWTEHF+V+I
Sbjct: 95 LFAEAGVPLMEHQIVPLPLSSSTLMCDICMEAVCSKDSTKMDCGHCFCNNCWTEHFVVRI 154
Query: 188 NEGQSRRIRCMAHKCNAICDEAIVRNLVNARDPDLAERFERFLLESYIEDNTMVKWCPSV 367
NEGQSRRIRCMA+KCNAICDEAIVRNLV R PDLAE+F+RFLLESYIEDN MVKWCPS
Sbjct: 155 NEGQSRRIRCMAYKCNAICDEAIVRNLVGRRHPDLAEKFDRFLLESYIEDNKMVKWCPSA 214
Query: 368 PHCGNAIRVEDEIYCEVECACGLQFCFGCSSEAHSPCSCLMWKLWAKKCKDESETVNWMT 547
PHCGNAIRVED+ +CEVEC+CGLQFCF C SEAHSPCSCLMW+ W KKC+DESETVNW+T
Sbjct: 215 PHCGNAIRVEDDEFCEVECSCGLQFCFSCLSEAHSPCSCLMWEFWTKKCRDESETVNWIT 274
Query: 548 VNTKPCPKCYKPVEKNGGCNLVSCICGQPFCWVCGGATGRDHTWTSISGHSCGRYKEDTE 727
V+TKPCPKC+KPVEKNGGCNLVSCICGQ FCW+CGGATGRDHTW+SISGHSCGRYKED E
Sbjct: 275 VHTKPCPKCHKPVEKNGGCNLVSCICGQAFCWLCGGATGRDHTWSSISGHSCGRYKEDRE 334
Query: 728 KKAERAKRDLYRYMHYHNHYKAHTDSFKLEAKLKETIQGKISILEDNSTSDKDCSWVTNG 907
KKAERAKRDLYRYMHYHN YKAHTDSFKLE+KLK+TI+ K+S E+ ++ +D SWVTNG
Sbjct: 335 KKAERAKRDLYRYMHYHNRYKAHTDSFKLESKLKDTIKVKVSNSEEKESTLRDFSWVTNG 394
Query: 908 LYRLFRSRRVLSYSYPFAYYMFGDDLFKDEMTKEETERKQHLFEDQQQQLESNVEKLSKF 1087
LYRLFRSRRVLSYSYPFA+YMFGDDLF DEMTKEE E KQHLFEDQQQQLE+NVEKLSKF
Sbjct: 395 LYRLFRSRRVLSYSYPFAFYMFGDDLFNDEMTKEEREIKQHLFEDQQQQLEANVEKLSKF 454
Query: 1088 IEEPFDTYAMDKVMEIRMQVINLTVITDRLCTKMYECIENDLLGCLQFETHHIAPYKSKG 1267
IEEPFD Y DKV +IRMQVINL+VITD LC KMYECIENDLLG LQ H+IAPYKSKG
Sbjct: 455 IEEPFDQYEEDKVRDIRMQVINLSVITDTLCKKMYECIENDLLGSLQHGIHNIAPYKSKG 514
Query: 1268 VEKASEL 1288
+E+ASEL
Sbjct: 515 IERASEL 521
>ref|XP_003537904.1| PREDICTED: probable E3 ubiquitin-protein ligase ARI1-like isoform 3
[Glycine max]
Length = 595
Score = 702 bits (1813), Expect(2) = 0.0
Identities = 322/436 (73%), Positives = 373/436 (85%), Gaps = 1/436 (0%)
Frame = +2
Query: 8 LFAEAGVTVLESRSHFTSQSRSEETCYICMEDIPIEQVTTMDCGHCFCNNCWTEHFIVKI 187
LFAEAGV+V E R+ S CYICME++P + T MDCGHCFCN CW EHFIVKI
Sbjct: 96 LFAEAGVSVDEHRNS-DSPVPPAFMCYICMEEVPSSKTTRMDCGHCFCNGCWIEHFIVKI 154
Query: 188 NEGQSRRIRCMAHKCNAICDEAIVRNLVNARDPDLAERFERFLLESYIEDNTMVKWCPSV 367
NEGQS+RIRCM HKCN+ICD+A+VR L++ P +AE++ERFLLESYIEDN VKWCPS
Sbjct: 155 NEGQSKRIRCMEHKCNSICDDAVVRTLLSREHPHMAEKYERFLLESYIEDNKRVKWCPST 214
Query: 368 PHCGNAIRVEDEIYCEVECACGLQFCFGCSSEAHSPCSCLMWKLWAKKCKDESETVNWMT 547
PHCGNAIRVED+ CEVEC+CG+QFCF C SEAHSPCSCLMW+LWAKKC+DESETVNW+T
Sbjct: 215 PHCGNAIRVEDDELCEVECSCGVQFCFSCLSEAHSPCSCLMWELWAKKCRDESETVNWIT 274
Query: 548 VNTKPCPKCYKPVEKNGGCNLVSCICGQPFCWVCGGATGRDHTWTSISGHSCGRYKEDTE 727
V+TKPCPKC+KPVEKNGGCNLVSCICGQ FCW+CGGATGR+HTW+SI+GHSCGRYKE E
Sbjct: 275 VHTKPCPKCHKPVEKNGGCNLVSCICGQAFCWLCGGATGREHTWSSIAGHSCGRYKEQ-E 333
Query: 728 KKAERAKRDLYRYMHYHNHYKAHTDSFKLEAKLKETIQGKISILEDNSTSDKDCSWVTNG 907
K AERAKRDLYRYMHYHN YKAHTDSFK+E+KLKETIQGKI+I E+ ++ +D SWV NG
Sbjct: 334 KTAERAKRDLYRYMHYHNRYKAHTDSFKIESKLKETIQGKIAISEEKDSTLRDYSWVNNG 393
Query: 908 LYRLFRSRRVLSYSYPFAYYMFGDDLFKDEMTKEETERKQHLFEDQQQQLESNVEKLSKF 1087
L RLFRSRRVLSYSY FA+YMFGD+LFKDEMT + E KQ+LFEDQQQQLE+NVEKLSK
Sbjct: 394 LSRLFRSRRVLSYSYAFAFYMFGDELFKDEMTDAQREIKQNLFEDQQQQLEANVEKLSKI 453
Query: 1088 IEEPFDTYAMDKVMEIRMQVINLTVITDRLCTKMYECIENDLLGCLQFETHHIAPYKSKG 1267
+EEPF+T++ DKV+EIRMQ++NL+ I D+LC KMYECIENDLLG L H IAPYKSKG
Sbjct: 454 LEEPFETFSDDKVVEIRMQILNLSTIIDKLCQKMYECIENDLLGSLNLGIHSIAPYKSKG 513
Query: 1268 VEKASELPV-WSTKAD 1312
+E+ASEL V W+ K +
Sbjct: 514 IERASELSVGWNNKVN 529
Score = 43.9 bits (102), Expect(2) = 0.0
Identities = 24/44 (54%), Positives = 31/44 (70%), Gaps = 2/44 (4%)
Frame = +3
Query: 1416 LGGTVEHNDPSGT-QNNERGCSSRKRTRREA-RGDGLFDLNLPA 1541
+G T E + PSG+ +++ GCSSRKR R+E G G FDLNLPA
Sbjct: 546 VGVTEELDRPSGSGSSDDNGCSSRKRARKEGLGGGGFFDLNLPA 589