BLASTX nr result

ID: Coptis23_contig00004460 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00004460
         (2051 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002273006.2| PREDICTED: 5'-methylthioadenosine/S-adenosyl...   102   4e-19
ref|XP_003631578.1| PREDICTED: 5'-methylthioadenosine/S-adenosyl...   102   4e-19
emb|CAB85633.1| putative ripening-related protein [Vitis vinifera]    100   1e-18
ref|XP_002313743.1| predicted protein [Populus trichocarpa] gi|2...   100   1e-18
ref|XP_002305481.1| predicted protein [Populus trichocarpa] gi|1...    98   7e-18

>ref|XP_002273006.2| PREDICTED: 5'-methylthioadenosine/S-adenosylhomocysteine
           nucleosidase 1 isoform 1 [Vitis vinifera]
          Length = 269

 Score =  102 bits (254), Expect = 4e-19
 Identities = 59/117 (50%), Positives = 67/117 (57%)
 Frame = +1

Query: 25  AMQTEALLLVTKFQLSEDIDSVFPKGVPWVRYHGIYKDLNINIIWPGKDAVLGMSFPXXX 204
           AMQTEAL LV +FQL+ED+DSVFP+GVPWVRYHGIYKDL+I+IIWPGKD VLG+      
Sbjct: 32  AMQTEALPLVNRFQLTEDLDSVFPRGVPWVRYHGIYKDLHISIIWPGKDLVLGVD----- 86

Query: 205 XXXXRSIHNQSTTYTYIVVAPWVRGHGVTHV*PLVCTTK*YVGTVSASLVTFASIQA 375
                                                    VGTVSASLVT+ASIQA
Sbjct: 87  ----------------------------------------NVGTVSASLVTYASIQA 103


>ref|XP_003631578.1| PREDICTED: 5'-methylthioadenosine/S-adenosylhomocysteine
           nucleosidase 1 isoform 2 [Vitis vinifera]
           gi|297744678|emb|CBI37940.3| unnamed protein product
           [Vitis vinifera]
          Length = 265

 Score =  102 bits (254), Expect = 4e-19
 Identities = 59/117 (50%), Positives = 67/117 (57%)
 Frame = +1

Query: 25  AMQTEALLLVTKFQLSEDIDSVFPKGVPWVRYHGIYKDLNINIIWPGKDAVLGMSFPXXX 204
           AMQTEAL LV +FQL+ED+DSVFP+GVPWVRYHGIYKDL+I+IIWPGKD VLG+      
Sbjct: 32  AMQTEALPLVNRFQLTEDLDSVFPRGVPWVRYHGIYKDLHISIIWPGKDLVLGVD----- 86

Query: 205 XXXXRSIHNQSTTYTYIVVAPWVRGHGVTHV*PLVCTTK*YVGTVSASLVTFASIQA 375
                                                    VGTVSASLVT+ASIQA
Sbjct: 87  ----------------------------------------NVGTVSASLVTYASIQA 103


>emb|CAB85633.1| putative ripening-related protein [Vitis vinifera]
          Length = 269

 Score =  100 bits (250), Expect = 1e-18
 Identities = 58/117 (49%), Positives = 66/117 (56%)
 Frame = +1

Query: 25  AMQTEALLLVTKFQLSEDIDSVFPKGVPWVRYHGIYKDLNINIIWPGKDAVLGMSFPXXX 204
           AMQTEAL LV +FQL+ED+DSVFP+GVPWVRYHGIYKDL+I+IIWPGKD VLG+      
Sbjct: 32  AMQTEALPLVNRFQLTEDLDSVFPRGVPWVRYHGIYKDLHISIIWPGKDLVLGVD----- 86

Query: 205 XXXXRSIHNQSTTYTYIVVAPWVRGHGVTHV*PLVCTTK*YVGTVSASLVTFASIQA 375
                                                    VGTVSAS VT+ASIQA
Sbjct: 87  ----------------------------------------NVGTVSASFVTYASIQA 103


>ref|XP_002313743.1| predicted protein [Populus trichocarpa] gi|222850151|gb|EEE87698.1|
           predicted protein [Populus trichocarpa]
          Length = 263

 Score =  100 bits (249), Expect = 1e-18
 Identities = 54/117 (46%), Positives = 65/117 (55%)
 Frame = +1

Query: 25  AMQTEALLLVTKFQLSEDIDSVFPKGVPWVRYHGIYKDLNINIIWPGKDAVLGMSFPXXX 204
           AMQTEA+ +V KFQL ED+DSVFPKGVPWVRYHG+YKDL IN++WPGKD+ LG+      
Sbjct: 30  AMQTEAMPIVNKFQLKEDLDSVFPKGVPWVRYHGVYKDLQINLVWPGKDSTLGVD----- 84

Query: 205 XXXXRSIHNQSTTYTYIVVAPWVRGHGVTHV*PLVCTTK*YVGTVSASLVTFASIQA 375
                                                    VGT+SASLVT+A+IQA
Sbjct: 85  ----------------------------------------SVGTISASLVTYAAIQA 101


>ref|XP_002305481.1| predicted protein [Populus trichocarpa] gi|118481001|gb|ABK92454.1|
           unknown [Populus trichocarpa]
           gi|222848445|gb|EEE85992.1| predicted protein [Populus
           trichocarpa]
          Length = 263

 Score = 98.2 bits (243), Expect = 7e-18
 Identities = 54/117 (46%), Positives = 64/117 (54%)
 Frame = +1

Query: 25  AMQTEALLLVTKFQLSEDIDSVFPKGVPWVRYHGIYKDLNINIIWPGKDAVLGMSFPXXX 204
           AMQTEA+ +V KFQL ED+D VFPKGVPWVRYHGIYKDL+IN++WPGKD  LG+      
Sbjct: 30  AMQTEAMPVVNKFQLKEDLDPVFPKGVPWVRYHGIYKDLHINLVWPGKDLTLGVD----- 84

Query: 205 XXXXRSIHNQSTTYTYIVVAPWVRGHGVTHV*PLVCTTK*YVGTVSASLVTFASIQA 375
                                                    VGT+SASLVT+A+IQA
Sbjct: 85  ----------------------------------------SVGTISASLVTYAAIQA 101


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