BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00004454
         (973 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN69116.1| hypothetical protein VITISV_031843 [Vitis vinifera]   129   1e-27
ref|XP_002284795.1| PREDICTED: F-box protein SKIP23-like [Vitis ...   128   2e-27
ref|XP_002300674.1| predicted protein [Populus trichocarpa] gi|2...   124   3e-26
ref|XP_002510618.1| ubiquitin-protein ligase, putative [Ricinus ...   123   6e-26
ref|XP_002510612.1| conserved hypothetical protein [Ricinus comm...   110   5e-22

>emb|CAN69116.1| hypothetical protein VITISV_031843 [Vitis vinifera]
          Length = 389

 Score =  129 bits (323), Expect = 1e-27
 Identities = 78/222 (35%), Positives = 119/222 (53%), Gaps = 9/222 (4%)
 Frame = -1

Query: 940 NDYITKAVLSANPILNPNYVVMVIHGGCRLLAFWRPGDKAWTSLDSKYTLVMDIIYFKEQ 761
           + +I K +LS++P    +++ +VI      LA  R  D +WT L+   +   D+I+ +  
Sbjct: 159 DSFIKKTILSSSPANGSDFIAVVILNQTGDLALCRKSDDSWTFLEDAQSYSEDVIFHRGL 218

Query: 760 FYVVTHFGEVLAFDLNHPYPKVSVIS-PKRTDYSLTCHFKYLVVSSGDLLQVSR------ 602
           FY V  +G +   D++   P+VS+I  P++    L    +YLV S  +LL V+R      
Sbjct: 219 FYAVNKYGSIAVCDVSGSSPRVSIIEMPQQFGGDL----QYLVESGEELLLVTRYLDLTY 274

Query: 601 --RRTGTGGYFYTRRFELFKLDTTRTEWVEVKSLGGRILLLGDNTSLSLSASEFPKCKSN 428
                 T   + T RF++ +LD+    W  V SLG R L LG+N SLSLS+ +FP CK N
Sbjct: 275 DVEXDQTSLIYRTTRFQVCRLDSKAPRWEVVSSLGDRALFLGENLSLSLSSVDFPGCKGN 334

Query: 427 SIYFTDDFHEAYSSRVYQMKSDGPVPHDIGVFNLEDGSVQPL 302
            IY+TDD+ E     +           D+G+FNLEDGS++PL
Sbjct: 335 CIYYTDDYSEDNYDGI-------GGEQDLGIFNLEDGSIEPL 369


>ref|XP_002284795.1| PREDICTED: F-box protein SKIP23-like [Vitis vinifera]
          Length = 389

 Score =  128 bits (322), Expect = 2e-27
 Identities = 78/222 (35%), Positives = 118/222 (53%), Gaps = 9/222 (4%)
 Frame = -1

Query: 940 NDYITKAVLSANPILNPNYVVMVIHGGCRLLAFWRPGDKAWTSLDSKYTLVMDIIYFKEQ 761
           + +I K +LS++P    +++ +VI      LA  R  D +WT L+   +   D+I+ +  
Sbjct: 159 DSFIKKTILSSSPANGSDFIAVVILNQTGDLALCRKSDDSWTFLEDAQSYAEDVIFHRGL 218

Query: 760 FYVVTHFGEVLAFDLNHPYPKVSVIS-PKRTDYSLTCHFKYLVVSSGDLLQVSR------ 602
           FY V  +G +   D++   P+VS+I  P++    L    +YLV S  +LL V+R      
Sbjct: 219 FYAVNKYGSIAVCDVSGSSPRVSIIEMPQQFGGDL----QYLVESGEELLLVTRYLDLTY 274

Query: 601 --RRTGTGGYFYTRRFELFKLDTTRTEWVEVKSLGGRILLLGDNTSLSLSASEFPKCKSN 428
                 T   + T RF++ +LD     W  V SLG R L LG+N SLSLS+ +FP CK N
Sbjct: 275 DVEPDQTSLIYRTTRFQVCRLDLKAPRWEVVSSLGDRALFLGENLSLSLSSVDFPGCKGN 334

Query: 427 SIYFTDDFHEAYSSRVYQMKSDGPVPHDIGVFNLEDGSVQPL 302
            IY+TDD+ E     +           D+G+FNLEDGS++PL
Sbjct: 335 CIYYTDDYSEDNYDGI-------GGEQDLGIFNLEDGSIEPL 369


>ref|XP_002300674.1| predicted protein [Populus trichocarpa] gi|222842400|gb|EEE79947.1|
           predicted protein [Populus trichocarpa]
          Length = 393

 Score =  124 bits (311), Expect = 3e-26
 Identities = 80/218 (36%), Positives = 117/218 (53%), Gaps = 7/218 (3%)
 Frame = -1

Query: 934 YITKAVLSANPILNPN--YVVMVIHGGCRLLAFWRPGDKAWTSLDSKYTLVMDIIYFKEQ 761
           +I K V+S++P+      +V M I      LA+ + GD+ W  +++  +   D+IYF   
Sbjct: 163 FIKKVVMSSSPLEKKGDFFVAMAILCSTGDLAYCKNGDECWNIVENSRSFSEDVIYFNGL 222

Query: 760 FYVVTHFGEVLAFDLNHPYPKVSVISPKRTDYSLTCHFKYLVVSSGDLLQVSRRRTGTGG 581
           FY V   G+++  D+N   PKVS I   R    +    +YLV S   LL V+R       
Sbjct: 223 FYAVNKAGQIVVCDVNGNSPKVSFIETPR---QIGGDMQYLVSSGDGLLLVTRYLDLDVE 279

Query: 580 Y----FYTRRFELFKLDTTRTEWVEVKSLGGRILLLGDNTSLSLSASEFPKCKSNSIYFT 413
           +    + T RFE+FKLD     W  V SLG  +L +G+N+SL+LSAS    C  + IY+T
Sbjct: 280 FDIFIYKTARFEVFKLDLNGPRWERVTSLGDMMLFIGENSSLALSASGLSGCMGDCIYYT 339

Query: 412 DDFHEAYSSRVYQMKSDGPV-PHDIGVFNLEDGSVQPL 302
           DD    YS+  Y    DG +  HD+G+F L DGS++PL
Sbjct: 340 DD----YSANNY----DGHIGEHDLGIFKLSDGSIEPL 369


>ref|XP_002510618.1| ubiquitin-protein ligase, putative [Ricinus communis]
           gi|223551319|gb|EEF52805.1| ubiquitin-protein ligase,
           putative [Ricinus communis]
          Length = 398

 Score =  123 bits (309), Expect = 6e-26
 Identities = 74/224 (33%), Positives = 123/224 (54%), Gaps = 11/224 (4%)
 Frame = -1

Query: 940 NDYITKAVLSANPILNPNYVVMVIHGGCRLLAFWRPGDKAWTSLDSKYTLVMDIIYFKEQ 761
           + +I K VLS++P+ + N+VV+ I      LA+ R GDK+W+ +++  +   D+I+    
Sbjct: 162 DSFIRKVVLSSSPLKDNNFVVIAILNQTDDLAYCRNGDKSWSLVENARSFCEDVIFVNGM 221

Query: 760 FYVVTHFGEVLAFDLNHPYPKVSVISPKRTDYSLTCHFKYLVVSSGDLLQVSRRRTGTGG 581
           FY V   G+++  D++   P+VS +   R         +YLV S  +LL V+R       
Sbjct: 222 FYAVNKAGQIVICDISSDSPRVSFMETPRQAGG---DMQYLVNSGDELLLVTRYLDLEYE 278

Query: 580 Y----------FYTRRFELFKLDTTRTEWVEVKSLGGRILLLGDNTSLSLSASEFPKCKS 431
           +          + T RFE+F+LD    +W+ + +LG + L +G+N+SLSLSA++F  C  
Sbjct: 279 FDHPDMEPHLIYRTIRFEVFRLDWNGPQWLRMSTLGDKALFIGENSSLSLSATDFSGCMG 338

Query: 430 NSIYFTDDFHEAYSSRVYQMKSDGPV-PHDIGVFNLEDGSVQPL 302
           N IY+TDD+ +A          DG    HD+G+F L D +++PL
Sbjct: 339 NCIYYTDDYLDA--------NYDGHFGDHDLGIFKLCDETIEPL 374


>ref|XP_002510612.1| conserved hypothetical protein [Ricinus communis]
           gi|223551313|gb|EEF52799.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 402

 Score =  110 bits (275), Expect = 5e-22
 Identities = 77/223 (34%), Positives = 117/223 (52%), Gaps = 8/223 (3%)
 Frame = -1

Query: 946 FH--NDYITKAVLSANPILNPNYVVMVIHGGCRLLAFWRPGDKAWTSLD---SKYTLVMD 782
           FH  + +I KA+LS++P L+ N++ +VI+G    LAF R GD AWT +D   S      D
Sbjct: 151 FHIRDTFIVKAILSSDPSLDTNFMAVVIYGVNENLAFCRSGDAAWTVIDETTSPPRRYKD 210

Query: 781 IIYFKEQFYVVTHFGEVLAFDLNHPYPKVS--VISPKRTDYSLTCHFKYLVVSSGDLLQV 608
            ++   + + V   G +      +   + +   +   RT Y       Y   S  +LL V
Sbjct: 211 ALFRAGKLFAVDQTGGISILTEENTMIRFADPPLVSSRTGYKQWYLASY---SEEELLIV 267

Query: 607 SRRRTGTGGYFY-TRRFELFKLDTTRTEWVEVKSLGGRILLLGDNTSLSLSASEFPKCKS 431
            R R     Y Y T RFE++KLD     W + +SLG ++L LG N SLS+SA ++ KCK 
Sbjct: 268 CRYRKVVPDYEYKTERFEIYKLDDGG--WKKKESLGDKMLFLGGNGSLSISALDYSKCKG 325

Query: 430 NSIYFTDDFHEAYSSRVYQMKSDGPVPHDIGVFNLEDGSVQPL 302
           N IYFTDD+       V++        HD G++++EDG+++ L
Sbjct: 326 NCIYFTDDYIRLCKDYVWE-------GHDYGIYDIEDGNIRSL 361