BLASTX nr result
ID: Coptis23_contig00004451
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Coptis23_contig00004451
(2078 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002284648.1| PREDICTED: DELLA protein GAI1 isoform 1 [Vit... 699 0.0
gb|AEK06229.1| GAI1 [Vitis vinifera] 696 0.0
ref|XP_002266267.1| PREDICTED: DELLA protein GAI1-like isoform 1... 682 0.0
ref|XP_002312450.1| DELLA domain GRAS family transcription facto... 681 0.0
emb|CAN59753.1| hypothetical protein VITISV_036639 [Vitis vinifera] 677 0.0
>ref|XP_002284648.1| PREDICTED: DELLA protein GAI1 isoform 1 [Vitis vinifera]
gi|75159681|sp|Q8S4W7.1|GAI1_VITVI RecName: Full=DELLA
protein GAI1; AltName: Full=Gibberellic acid-insensitive
mutant protein 1; AltName: Full=VvGAI1
gi|20334379|gb|AAM19210.1|AF378125_1 GAI-like protein 1
[Vitis vinifera]
Length = 590
Score = 699 bits (1805), Expect = 0.0
Identities = 383/587 (65%), Positives = 439/587 (74%), Gaps = 44/587 (7%)
Frame = +2
Query: 143 MKRE-HNSSSVVTEMGVSGKNKMFE---EQDAGFDELLAVLGYKVRSSDMAEVASKLEQL 310
MKRE H+ +GK KM++ +QDAG DELLAVLGY V++SDMAEVA KLEQL
Sbjct: 1 MKREYHHPHHPTCSTSPTGKGKMWDADPQQDAGMDELLAVLGYNVKASDMAEVAQKLEQL 60
Query: 311 EMAMSVSNSNNTSFEEDGLLSQLSSQTVHYNPSDLSSYLQSMLTEINPTPAPSSNHPI-- 484
E + + +EDGL S L+S+TVHYNPSDLS++L SML+E NPTP + ++P
Sbjct: 61 EEVI-------VNAQEDGL-SHLASETVHYNPSDLSNWLGSMLSEFNPTPNCALDNPFLP 112
Query: 485 -------ADNNELASISPSMFD------DLRAIPGNAICS---ATPNEELGP-----ERK 601
+ + PS+FD DL+AIPG A+ S P + P + K
Sbjct: 113 PISPLDYTNCSTQPKQEPSIFDSPSLDYDLKAIPGKALYSHIEQPPQQPPAPPLYQRDNK 172
Query: 602 RLKLLGSVT---------------ESTRPVVLVDSQETGIRLVHTLLACAEAVQEQNLQL 736
RLK S T ES RPVVLVDSQETGIRLVHTL+ACAEAVQ++NL+L
Sbjct: 173 RLKPTTSATANSVSSVIGGWGVPTESARPVVLVDSQETGIRLVHTLMACAEAVQQENLKL 232
Query: 737 AESLCKQIGFLAVSQAGAMRKVATYFAEALACRIFRFYPQXXXXXXXXXXXXXXHFYESC 916
AE+L KQIGFLAVSQAGAMRKVATYFAE LA RI+R YP HFYE+C
Sbjct: 233 AEALVKQIGFLAVSQAGAMRKVATYFAEGLARRIYRLYPDKPLDSSFSDILQM-HFYETC 291
Query: 917 PYLKFAHFTANQAILEAFQGENHVHVIDFSMKQGIQWPALIQALALRPGGPPTFRLTAIG 1096
PYLKFAHFTANQAILEAF+G+ VHVIDFSMKQG+QWPAL+QALALRPGGPP+FRLT IG
Sbjct: 292 PYLKFAHFTANQAILEAFEGKKRVHVIDFSMKQGMQWPALMQALALRPGGPPSFRLTGIG 351
Query: 1097 PPQADNTDALQQVGLRLAQLAETVHIEFEYRGFVASSLADIDASMLNLRANEAVAVNSVF 1276
PP DNTD L +VG +LAQLAET+H+EFEYRGFVA+SLAD+DASML LR E+VAVNSVF
Sbjct: 352 PPSTDNTDHLHEVGWKLAQLAETIHVEFEYRGFVANSLADLDASMLELRDGESVAVNSVF 411
Query: 1277 ELHRLLARPGAIDKVLKSIKSMSPKIVTIVEQEANHNGLVFLDRFTESLHYYSTLFDSLE 1456
ELH LLARPG I++VL ++K M P IVTIVEQEANHNG VFLDRFTESLHYYSTLFDSLE
Sbjct: 412 ELHSLLARPGGIERVLSAVKDMKPDIVTIVEQEANHNGPVFLDRFTESLHYYSTLFDSLE 471
Query: 1457 GCGTS--SEDDQVMSEVYLGKQISNVVACEGVERVERHETLSQWRVRLGSAGFSPVHLGS 1630
GCG S + D++MSEVYLG+QI NVVACEG ERVERHETL+QWR RLGSAGF PV+LGS
Sbjct: 472 GCGVSPVNTQDKLMSEVYLGQQICNVVACEGPERVERHETLAQWRARLGSAGFDPVNLGS 531
Query: 1631 NAFKQASMLLSLFGGVAGYRVEENQGCLMLGWHTRPLIATSAWQLGS 1771
NAFKQASMLL+LF G GYRVEEN GCLMLGWHTRPLIATSAWQL +
Sbjct: 532 NAFKQASMLLALFAGGDGYRVEENNGCLMLGWHTRPLIATSAWQLAN 578
>gb|AEK06229.1| GAI1 [Vitis vinifera]
Length = 590
Score = 696 bits (1797), Expect = 0.0
Identities = 381/587 (64%), Positives = 438/587 (74%), Gaps = 44/587 (7%)
Frame = +2
Query: 143 MKRE-HNSSSVVTEMGVSGKNKMFE---EQDAGFDELLAVLGYKVRSSDMAEVASKLEQL 310
MKRE H+ +GK KM++ +QDAG DELLAVLGY V++SDMAEVA +LEQL
Sbjct: 1 MKREYHHPHHPTCSTSPTGKGKMWDADPQQDAGMDELLAVLGYNVKASDMAEVAQELEQL 60
Query: 311 EMAMSVSNSNNTSFEEDGLLSQLSSQTVHYNPSDLSSYLQSMLTEINPTPAPSSNHPI-- 484
E + + +EDGL S L+S+TVHYNPSDLS++L SML+E NPTP + ++P
Sbjct: 61 EEVI-------VNAQEDGL-SHLASETVHYNPSDLSNWLGSMLSEFNPTPNCALDNPFLP 112
Query: 485 -------ADNNELASISPSMFD------DLRAIPGNAICS---ATPNEELGP-----ERK 601
+ + PS+FD DL+AIPG A+ S P + P + K
Sbjct: 113 PISPLDYTNCSTQPKQEPSIFDSPSLDYDLKAIPGKALYSHIEQPPQQPPAPPLYQRDNK 172
Query: 602 RLKLLGSVT---------------ESTRPVVLVDSQETGIRLVHTLLACAEAVQEQNLQL 736
R K S T ES RPVVLVDSQETGIRLVHTL+ACAEAVQ++NL+L
Sbjct: 173 RSKPTASATANSVSSVIGGWGVPTESARPVVLVDSQETGIRLVHTLMACAEAVQQENLKL 232
Query: 737 AESLCKQIGFLAVSQAGAMRKVATYFAEALACRIFRFYPQXXXXXXXXXXXXXXHFYESC 916
AE+L KQIGFLAVSQAGAMRKVATYFAE LA RI+R YP HFYE+C
Sbjct: 233 AEALVKQIGFLAVSQAGAMRKVATYFAEGLARRIYRLYPDKPLDSSFSDILQM-HFYETC 291
Query: 917 PYLKFAHFTANQAILEAFQGENHVHVIDFSMKQGIQWPALIQALALRPGGPPTFRLTAIG 1096
PYLKFAHFTANQAILEAF+G+ VHVIDFSMKQG+QWPAL+QALALRPGGPP+FRLT IG
Sbjct: 292 PYLKFAHFTANQAILEAFEGKKRVHVIDFSMKQGMQWPALMQALALRPGGPPSFRLTGIG 351
Query: 1097 PPQADNTDALQQVGLRLAQLAETVHIEFEYRGFVASSLADIDASMLNLRANEAVAVNSVF 1276
PP DNTD L +VG +LAQLAET+H+EFEYRGFVA+SLAD+DASML LR E+VAVNSVF
Sbjct: 352 PPSTDNTDHLHEVGWKLAQLAETIHVEFEYRGFVANSLADLDASMLELRDGESVAVNSVF 411
Query: 1277 ELHRLLARPGAIDKVLKSIKSMSPKIVTIVEQEANHNGLVFLDRFTESLHYYSTLFDSLE 1456
ELH LLARPG I++VL ++K M P IVTIVEQEANHNG VFLDRFTESLHYYSTLFDSLE
Sbjct: 412 ELHSLLARPGGIERVLSAVKDMKPDIVTIVEQEANHNGPVFLDRFTESLHYYSTLFDSLE 471
Query: 1457 GCGTS--SEDDQVMSEVYLGKQISNVVACEGVERVERHETLSQWRVRLGSAGFSPVHLGS 1630
GCG S + D++MSEVYLG+QI NVVACEG ERVERHETL+QWR RLGSAGF PV+LGS
Sbjct: 472 GCGVSPVNTQDKLMSEVYLGQQICNVVACEGPERVERHETLAQWRARLGSAGFDPVNLGS 531
Query: 1631 NAFKQASMLLSLFGGVAGYRVEENQGCLMLGWHTRPLIATSAWQLGS 1771
NAFKQASMLL+LF G GYRVEEN GCLMLGWHTRPLIATSAWQL +
Sbjct: 532 NAFKQASMLLALFAGGDGYRVEENNGCLMLGWHTRPLIATSAWQLAN 578
>ref|XP_002266267.1| PREDICTED: DELLA protein GAI1-like isoform 1 [Vitis vinifera]
Length = 613
Score = 682 bits (1760), Expect = 0.0
Identities = 377/579 (65%), Positives = 429/579 (74%), Gaps = 51/579 (8%)
Frame = +2
Query: 188 VSGKNKMFEE---QDAGFDELLAVLGYKVRSSDMAEVASKLEQLEMAMSVSNSNNTSFEE 358
VS K KM+++ QDAG DELLAVLGY VRSSDM +VA KLEQLEM M + +E
Sbjct: 28 VSAKGKMWDDGQQQDAGMDELLAVLGYNVRSSDMVDVAQKLEQLEMVMG-------NAQE 80
Query: 359 DGLLSQLSSQTVHYNPSDLSSYLQSMLTEINPTPAP----SSNHPIADN----NELASIS 514
DG+ S LSS TVHYNPSDLS ++QSMLTE+NP + S PI D +E ++I+
Sbjct: 81 DGI-SHLSSGTVHYNPSDLSGWVQSMLTELNPPSSAFASSSQQTPIDDPLLAPSESSTIT 139
Query: 515 PSMFD-------------------DLRAIPGNAICSATPNEELGPER-KRLKL------- 613
F DL AIPG A+ + G + KR+K
Sbjct: 140 TLDFSGSRQQSEHQSRIYNDNSDYDLSAIPGVAVYRRPDQQGDGEKSSKRMKTASSSSSS 199
Query: 614 ---------LGSVTESTRPVVLVDSQETGIRLVHTLLACAEAVQEQNLQLAESLCKQIGF 766
L SV ESTRPVV+VDSQETG+RLVHTL+ACA+AVQ+ N++LA++L K IG
Sbjct: 200 STQQVQENGLASVAESTRPVVVVDSQETGVRLVHTLMACADAVQQDNMKLADALVKHIGL 259
Query: 767 LAVSQAGAMRKVATYFAEALACRIFRFYPQXXXXXXXXXXXXXXHFYESCPYLKFAHFTA 946
LA SQAGAMRKVATYFAEALA RI+R YPQ HFYE+CPYLKFAHFTA
Sbjct: 260 LAASQAGAMRKVATYFAEALARRIYRIYPQDSLESSYSDILQM-HFYEACPYLKFAHFTA 318
Query: 947 NQAILEAFQGENHVHVIDFSMKQGIQWPALIQALALRPGGPPTFRLTAIGPPQADNTDAL 1126
NQAILEAF G N VHVIDF +KQG+QWPAL+QALALRPGGPP+FRLT IGPPQ DNTDAL
Sbjct: 319 NQAILEAFAGANRVHVIDFGLKQGMQWPALMQALALRPGGPPSFRLTGIGPPQPDNTDAL 378
Query: 1127 QQVGLRLAQLAETVHIEFEYRGFVASSLADIDASMLNLRAN--EAVAVNSVFELHRLLAR 1300
QQVG +LAQLAET+ +EFE+RGFVA+SLAD++ SML +R EAVAVNSV ELHRLLAR
Sbjct: 379 QQVGWKLAQLAETIGVEFEFRGFVANSLADLEPSMLQIRPPEVEAVAVNSVLELHRLLAR 438
Query: 1301 PGAIDKVLKSIKSMSPKIVTIVEQEANHNGLVFLDRFTESLHYYSTLFDSLEGCGTS--S 1474
PGAI+KVL SIK+M PKIVT+VEQEA+HNG VFLDRFTE+LHYYS LFDSLEGCG S S
Sbjct: 439 PGAIEKVLSSIKAMKPKIVTVVEQEASHNGPVFLDRFTEALHYYSNLFDSLEGCGVSPPS 498
Query: 1475 EDDQVMSEVYLGKQISNVVACEGVERVERHETLSQWRVRLGSAGFSPVHLGSNAFKQASM 1654
D +MSE+YLG+QI NVVACEG ERVERHETLSQWR R+GSAGF PVHLGSNAFKQASM
Sbjct: 499 SQDLMMSEIYLGRQICNVVACEGAERVERHETLSQWRSRMGSAGFDPVHLGSNAFKQASM 558
Query: 1655 LLSLFGGVAGYRVEENQGCLMLGWHTRPLIATSAWQLGS 1771
LL+LF G GYRVEEN GCLMLGWHTRPLIATSAWQL S
Sbjct: 559 LLALFAGGDGYRVEENNGCLMLGWHTRPLIATSAWQLNS 597
>ref|XP_002312450.1| DELLA domain GRAS family transcription factor, GA insensitive (GAI),
GA1-3 1 (RGA1) repressor protein [Populus trichocarpa]
gi|222852270|gb|EEE89817.1| DELLA domain GRAS family
transcription factor, GA insensitive (GAI), GA1-3 1
(RGA1) repressor protein [Populus trichocarpa]
Length = 600
Score = 681 bits (1757), Expect = 0.0
Identities = 379/600 (63%), Positives = 433/600 (72%), Gaps = 44/600 (7%)
Frame = +2
Query: 104 PNQLNMP*FSLSKMKREHNSSSVVTEMGVSGKNKMFEE-----QDAGFDELLAVLGYKVR 268
P Q++ P S + S+S +GK K++EE D G DELLAVLGYKVR
Sbjct: 10 PQQISDP----STLAAAGYSTSTSAMAPHNGKAKIWEEGEGHQADGGMDELLAVLGYKVR 65
Query: 269 SSDMAEVASKLEQLEMAMSVSNSNNTSFEEDGLLSQLSSQTVHYNPSDLSSYLQSMLTEI 448
SSDMAEVA KLEQLE M + +EDGL S L+S +VHYNPSDLS++L+SM++E+
Sbjct: 66 SSDMAEVAQKLEQLEEVMGHA-------QEDGL-SHLASDSVHYNPSDLSTWLESMISEL 117
Query: 449 NPT------------PAPSS--------NHPIADNNELASISPSMFDDLRAIPGNAICSA 568
NP PA SS +H +L S S DL+ IPG A+ S
Sbjct: 118 NPNLNFDPSADSLLAPAESSTITSIDFSDHKHHQQQKLFEESSSSDYDLKVIPGKAVFSQ 177
Query: 569 TPNEELGPERKRLKL-------------------LGSVTESTRPVVLVDSQETGIRLVHT 691
T + E KRLK G TESTRPVVLVDSQE GIRLVH
Sbjct: 178 TQIDSR--ESKRLKTDLYQTSSSSSLSSATTLGSFGISTESTRPVVLVDSQENGIRLVHL 235
Query: 692 LLACAEAVQEQNLQLAESLCKQIGFLAVSQAGAMRKVATYFAEALACRIFRFYPQXXXXX 871
L+ACAEAVQE N LAE+L KQIGFLAVSQAG MRKVATYFAEALA RI++ PQ
Sbjct: 236 LMACAEAVQESNFTLAEALVKQIGFLAVSQAGVMRKVATYFAEALARRIYKLCPQNSTDH 295
Query: 872 XXXXXXXXXHFYESCPYLKFAHFTANQAILEAFQGENHVHVIDFSMKQGIQWPALIQALA 1051
HFYE+CPYLKFAHFTANQAILEAF+G+ VHVIDFSM QG+QWPAL+QALA
Sbjct: 296 SLSDILQI-HFYETCPYLKFAHFTANQAILEAFEGKKRVHVIDFSMNQGMQWPALMQALA 354
Query: 1052 LRPGGPPTFRLTAIGPPQADNTDALQQVGLRLAQLAETVHIEFEYRGFVASSLADIDASM 1231
LRPGGPP FRLT IGPP DNTD LQ+VG +LAQLAET+H+EFEYRGFVA+SLAD+DASM
Sbjct: 355 LRPGGPPAFRLTGIGPPAHDNTDHLQEVGWKLAQLAETIHVEFEYRGFVANSLADLDASM 414
Query: 1232 LNLRANEAVAVNSVFELHRLLARPGAIDKVLKSIKSMSPKIVTIVEQEANHNGLVFLDRF 1411
L LR E+VAVNSVFELH+LL+RPGAI+KVL +K M P+IVT+VEQEANHNG +FLDRF
Sbjct: 415 LELRPTESVAVNSVFELHKLLSRPGAIEKVLSVVKQMKPEIVTVVEQEANHNGPIFLDRF 474
Query: 1412 TESLHYYSTLFDSLEGCGTSSEDDQVMSEVYLGKQISNVVACEGVERVERHETLSQWRVR 1591
TESLHYYSTLFDSLE G+ S D++MSEVYLGKQI NVVACEG +RVERHETL+QWR R
Sbjct: 475 TESLHYYSTLFDSLE--GSVSTQDKIMSEVYLGKQICNVVACEGPDRVERHETLTQWRTR 532
Query: 1592 LGSAGFSPVHLGSNAFKQASMLLSLFGGVAGYRVEENQGCLMLGWHTRPLIATSAWQLGS 1771
LGS GF+PVHLGSNAFKQASMLL+LF G GYRVEEN GCLMLGWHTRPLIATSAW+L +
Sbjct: 533 LGSVGFAPVHLGSNAFKQASMLLALFAGGDGYRVEENNGCLMLGWHTRPLIATSAWRLNT 592
>emb|CAN59753.1| hypothetical protein VITISV_036639 [Vitis vinifera]
Length = 580
Score = 677 bits (1748), Expect = 0.0
Identities = 372/568 (65%), Positives = 422/568 (74%), Gaps = 48/568 (8%)
Frame = +2
Query: 212 EEQDAGFDELLAVLGYKVRSSDMAEVASKLEQLEMAMSVSNSNNTSFEEDGLLSQLSSQT 391
++QDAG DELLAVLGY VRSSDM +VA KLEQLEM M + +EDG+ S LSS T
Sbjct: 6 QQQDAGMDELLAVLGYNVRSSDMVDVAQKLEQLEMVMG-------NAQEDGI-SHLSSGT 57
Query: 392 VHYNPSDLSSYLQSMLTEINPTPAP----SSNHPIADN----NELASISPSMFD------ 529
VHYNPSDLS ++QSMLTE+NP + S PI D +E ++I+ F
Sbjct: 58 VHYNPSDLSGWVQSMLTELNPPSSAFASSSQQTPIDDPLLAPSESSTITTLDFSGSRQQS 117
Query: 530 -------------DLRAIPGNAICSATPNEELGPER-KRLKL----------------LG 619
DL AIPG A+ + G + KR+K L
Sbjct: 118 EHQSRIYNDNSDYDLSAIPGVAVYRRPDQQGDGEKSSKRMKTASSSSSSSTQQVQENGLA 177
Query: 620 SVTESTRPVVLVDSQETGIRLVHTLLACAEAVQEQNLQLAESLCKQIGFLAVSQAGAMRK 799
SV ESTRPVV+VDSQETG+RLVHTL+ACA+AVQ+ N++LA++L K IG LA SQAGAMRK
Sbjct: 178 SVAESTRPVVVVDSQETGVRLVHTLMACADAVQQDNMKLADALVKHIGLLAASQAGAMRK 237
Query: 800 VATYFAEALACRIFRFYPQXXXXXXXXXXXXXXHFYESCPYLKFAHFTANQAILEAFQGE 979
VATYFAEALA RI+R YPQ HFYE+CPYLKFAHFTANQAILEAF G
Sbjct: 238 VATYFAEALARRIYRIYPQDSLESSYSDILQM-HFYEACPYLKFAHFTANQAILEAFAGA 296
Query: 980 NHVHVIDFSMKQGIQWPALIQALALRPGGPPTFRLTAIGPPQADNTDALQQVGLRLAQLA 1159
N VHVIDF +KQG+QWPAL+QALALRPGGPP FRLT IGPPQ DNTDALQQVG +LAQLA
Sbjct: 297 NRVHVIDFGLKQGMQWPALMQALALRPGGPPXFRLTGIGPPQPDNTDALQQVGWKLAQLA 356
Query: 1160 ETVHIEFEYRGFVASSLADIDASMLNLRAN--EAVAVNSVFELHRLLARPGAIDKVLKSI 1333
ET+ +EFE+RGFVA+SLAD++ SML +R EAVAVNSV ELHRLLARPGAI+KVL SI
Sbjct: 357 ETIGVEFEFRGFVANSLADLEPSMLQIRPPEVEAVAVNSVLELHRLLARPGAIEKVLSSI 416
Query: 1334 KSMSPKIVTIVEQEANHNGLVFLDRFTESLHYYSTLFDSLEGCGTS--SEDDQVMSEVYL 1507
K+M PKIVT+VEQEA+HNG VFLDRFTE+LHYYS LFDSLEGCG S S D +MSE+YL
Sbjct: 417 KAMKPKIVTVVEQEASHNGPVFLDRFTEALHYYSNLFDSLEGCGVSPPSSQDLMMSEIYL 476
Query: 1508 GKQISNVVACEGVERVERHETLSQWRVRLGSAGFSPVHLGSNAFKQASMLLSLFGGVAGY 1687
G+QI NVVACEG ERVERHETLSQWR R+GSAGF PVHLGSNAFKQASMLL+LF G GY
Sbjct: 477 GRQICNVVACEGAERVERHETLSQWRSRMGSAGFDPVHLGSNAFKQASMLLALFAGGDGY 536
Query: 1688 RVEENQGCLMLGWHTRPLIATSAWQLGS 1771
RVEEN GCLMLGWHTRPLIATSAWQL S
Sbjct: 537 RVEENNGCLMLGWHTRPLIATSAWQLNS 564