BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00004443
         (927 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI20322.3| unnamed protein product [Vitis vinifera]              144   3e-76
ref|XP_002282230.1| PREDICTED: pentatricopeptide repeat-containi...   144   3e-76
ref|XP_003632962.1| PREDICTED: pentatricopeptide repeat-containi...   135   5e-75
emb|CAN64166.1| hypothetical protein VITISV_006333 [Vitis vinifera]   135   1e-74
ref|XP_002305141.1| predicted protein [Populus trichocarpa] gi|2...   129   6e-72

>emb|CBI20322.3| unnamed protein product [Vitis vinifera]
          Length = 687

 Score =  144 bits (362), Expect(3) = 3e-76
 Identities = 77/134 (57%), Positives = 95/134 (70%), Gaps = 4/134 (2%)
 Frame = -3

Query: 889 SIMKRL----NISSTLESNIKPFENFVTISSRSVYTGKFRKKNLYSKLSPLGDPGINLGP 722
           SI  RL    ++S TL SN+         S RSVYTG+F   NLYS++SPLG P ++L P
Sbjct: 4   SIFNRLKSNRHVSQTLISNV--------CSVRSVYTGRFANINLYSRISPLGTPNLSLVP 55

Query: 721 ELDKWVEEGKQIRFVELKRIIQDFRKRRRFTQALQVSEWMEKKVECTFSSGELAVQLDLI 542
            LD+WVEEGK++R VEL RII+D R R+R+ QAL+VSEWM  K  C FS    AVQLDLI
Sbjct: 56  VLDQWVEEGKKVRDVELHRIIRDLRSRKRYAQALEVSEWMSSKELCPFSPSARAVQLDLI 115

Query: 541 GRVRGLDSAESYFN 500
           G+VRGL+SAE+YFN
Sbjct: 116 GQVRGLESAENYFN 129



 Score = 96.7 bits (239), Expect(3) = 3e-76
 Identities = 46/63 (73%), Positives = 53/63 (84%)
 Frame = -1

Query: 447 AESYFNSLSDEDKSEKTYGALLNCYVRAGLPDKSVSHLQKMKENGFASTPLCYNDLMCLY 268
           AE+YFN++S E+K +K YGALLNCYVR  + DKS+SHLQKMKE GFASTPL YN LMCLY
Sbjct: 124 AENYFNNMSAEEKIDKMYGALLNCYVRERVIDKSLSHLQKMKELGFASTPLPYNGLMCLY 183

Query: 267 TNT 259
            NT
Sbjct: 184 INT 186



 Score = 93.2 bits (230), Expect(3) = 3e-76
 Identities = 39/58 (67%), Positives = 52/58 (89%)
 Frame = -2

Query: 179 KVPGLLNEMKENGVVPDNFSYRICINSYGARSNIDEMEKVLVEMESQSHISMDWSTYA 6
           K+P +L+EM+ENG+ PDNFSYR+CINSYGARS+++ MEK+L EMES+SHI +DW TY+
Sbjct: 191 KIPDVLSEMQENGISPDNFSYRLCINSYGARSDLNSMEKILEEMESKSHIHIDWMTYS 248


>ref|XP_002282230.1| PREDICTED: pentatricopeptide repeat-containing protein At4g21705,
           mitochondrial [Vitis vinifera]
          Length = 504

 Score =  144 bits (362), Expect(3) = 3e-76
 Identities = 77/134 (57%), Positives = 95/134 (70%), Gaps = 4/134 (2%)
 Frame = -3

Query: 889 SIMKRL----NISSTLESNIKPFENFVTISSRSVYTGKFRKKNLYSKLSPLGDPGINLGP 722
           SI  RL    ++S TL SN+         S RSVYTG+F   NLYS++SPLG P ++L P
Sbjct: 4   SIFNRLKSNRHVSQTLISNV--------CSVRSVYTGRFANINLYSRISPLGTPNLSLVP 55

Query: 721 ELDKWVEEGKQIRFVELKRIIQDFRKRRRFTQALQVSEWMEKKVECTFSSGELAVQLDLI 542
            LD+WVEEGK++R VEL RII+D R R+R+ QAL+VSEWM  K  C FS    AVQLDLI
Sbjct: 56  VLDQWVEEGKKVRDVELHRIIRDLRSRKRYAQALEVSEWMSSKELCPFSPSARAVQLDLI 115

Query: 541 GRVRGLDSAESYFN 500
           G+VRGL+SAE+YFN
Sbjct: 116 GQVRGLESAENYFN 129



 Score = 96.7 bits (239), Expect(3) = 3e-76
 Identities = 46/63 (73%), Positives = 53/63 (84%)
 Frame = -1

Query: 447 AESYFNSLSDEDKSEKTYGALLNCYVRAGLPDKSVSHLQKMKENGFASTPLCYNDLMCLY 268
           AE+YFN++S E+K +K YGALLNCYVR  + DKS+SHLQKMKE GFASTPL YN LMCLY
Sbjct: 124 AENYFNNMSAEEKIDKMYGALLNCYVRERVIDKSLSHLQKMKELGFASTPLPYNGLMCLY 183

Query: 267 TNT 259
            NT
Sbjct: 184 INT 186



 Score = 93.2 bits (230), Expect(3) = 3e-76
 Identities = 39/58 (67%), Positives = 52/58 (89%)
 Frame = -2

Query: 179 KVPGLLNEMKENGVVPDNFSYRICINSYGARSNIDEMEKVLVEMESQSHISMDWSTYA 6
           K+P +L+EM+ENG+ PDNFSYR+CINSYGARS+++ MEK+L EMES+SHI +DW TY+
Sbjct: 191 KIPDVLSEMQENGISPDNFSYRLCINSYGARSDLNSMEKILEEMESKSHIHIDWMTYS 248


>ref|XP_003632962.1| PREDICTED: pentatricopeptide repeat-containing protein At4g21705,
           mitochondrial-like [Vitis vinifera]
          Length = 506

 Score =  135 bits (340), Expect(3) = 5e-75
 Identities = 65/106 (61%), Positives = 82/106 (77%)
 Frame = -3

Query: 817 ISSRSVYTGKFRKKNLYSKLSPLGDPGINLGPELDKWVEEGKQIRFVELKRIIQDFRKRR 638
           IS+R+ YT ++ K +LY+K+SPLGDP  ++ PELD WV+ G ++   EL+RII D RKR+
Sbjct: 26  ISNRTYYTSRYGKISLYNKISPLGDPNTSVVPELDNWVQNGNKVWVAELQRIIHDLRKRK 85

Query: 637 RFTQALQVSEWMEKKVECTFSSGELAVQLDLIGRVRGLDSAESYFN 500
           RF+QAL++SEWM KK  C FS  E AVQLDLIGRVRG  SAESYFN
Sbjct: 86  RFSQALEISEWMSKKGICAFSPTEHAVQLDLIGRVRGFLSAESYFN 131



 Score =  106 bits (264), Expect(3) = 5e-75
 Identities = 49/64 (76%), Positives = 55/64 (85%)
 Frame = -1

Query: 447 AESYFNSLSDEDKSEKTYGALLNCYVRAGLPDKSVSHLQKMKENGFASTPLCYNDLMCLY 268
           AESYFNSL + DK++KTYGALLNCYVR    DKS+SHLQKMKE GFAS+PL YND+MCLY
Sbjct: 126 AESYFNSLQNHDKTDKTYGALLNCYVRQRQTDKSLSHLQKMKEMGFASSPLTYNDIMCLY 185

Query: 267 TNTG 256
           TN G
Sbjct: 186 TNVG 189



 Score = 88.2 bits (217), Expect(3) = 5e-75
 Identities = 41/58 (70%), Positives = 47/58 (81%)
 Frame = -2

Query: 179 KVPGLLNEMKENGVVPDNFSYRICINSYGARSNIDEMEKVLVEMESQSHISMDWSTYA 6
           KVP +L EMK++ V PDNFSYRICINSYGA+S+I  ME VL EME Q HI MDW+TYA
Sbjct: 193 KVPDVLTEMKQSNVYPDNFSYRICINSYGAQSDIQGMENVLKEMERQPHIVMDWNTYA 250


>emb|CAN64166.1| hypothetical protein VITISV_006333 [Vitis vinifera]
          Length = 506

 Score =  135 bits (340), Expect(3) = 1e-74
 Identities = 65/106 (61%), Positives = 82/106 (77%)
 Frame = -3

Query: 817 ISSRSVYTGKFRKKNLYSKLSPLGDPGINLGPELDKWVEEGKQIRFVELKRIIQDFRKRR 638
           IS+R+ YT ++ K +LY+K+SPLGDP  ++ PELD WV+ G ++   EL+RII D RKR+
Sbjct: 26  ISNRTYYTSRYGKISLYNKISPLGDPNTSVVPELDNWVQNGNKVWVAELQRIIHDLRKRK 85

Query: 637 RFTQALQVSEWMEKKVECTFSSGELAVQLDLIGRVRGLDSAESYFN 500
           RF+QAL++SEWM KK  C FS  E AVQLDLIGRVRG  SAESYFN
Sbjct: 86  RFSQALEISEWMSKKGICAFSPTEHAVQLDLIGRVRGFLSAESYFN 131



 Score =  106 bits (264), Expect(3) = 1e-74
 Identities = 49/64 (76%), Positives = 55/64 (85%)
 Frame = -1

Query: 447 AESYFNSLSDEDKSEKTYGALLNCYVRAGLPDKSVSHLQKMKENGFASTPLCYNDLMCLY 268
           AESYFNSL + DK++KTYGALLNCYVR    DKS+SHLQKMKE GFAS+PL YND+MCLY
Sbjct: 126 AESYFNSLQNHDKTDKTYGALLNCYVRQRQTDKSLSHLQKMKEMGFASSPLTYNDIMCLY 185

Query: 267 TNTG 256
           TN G
Sbjct: 186 TNVG 189



 Score = 87.0 bits (214), Expect(3) = 1e-74
 Identities = 41/58 (70%), Positives = 47/58 (81%)
 Frame = -2

Query: 179 KVPGLLNEMKENGVVPDNFSYRICINSYGARSNIDEMEKVLVEMESQSHISMDWSTYA 6
           KVP +L EMK++ V PDNFSYRICINSY A+S+I  MEKVL EME Q HI MDW+TYA
Sbjct: 193 KVPDVLTEMKQSHVYPDNFSYRICINSYAAQSDIQGMEKVLKEMERQPHIVMDWNTYA 250


>ref|XP_002305141.1| predicted protein [Populus trichocarpa] gi|222848105|gb|EEE85652.1|
           predicted protein [Populus trichocarpa]
          Length = 492

 Score =  129 bits (324), Expect(3) = 6e-72
 Identities = 68/111 (61%), Positives = 78/111 (70%)
 Frame = -3

Query: 832 ENFVTISSRSVYTGKFRKKNLYSKLSPLGDPGINLGPELDKWVEEGKQIRFVELKRIIQD 653
           +N  TI +RS YT K  K  LYSK+SPLG    +L PELD WV  G ++R  EL+RII D
Sbjct: 12  QNQNTIITRSYYTNKANKATLYSKISPLGSTP-SLEPELDSWVRSGNKVRVAELQRIIHD 70

Query: 652 FRKRRRFTQALQVSEWMEKKVECTFSSGELAVQLDLIGRVRGLDSAESYFN 500
            RKR+RF+ ALQVSEWM KK  C FS  E AVQLDLIGRV G  SAE+YFN
Sbjct: 71  LRKRKRFSHALQVSEWMHKKDICIFSPSEHAVQLDLIGRVHGFVSAENYFN 121



 Score =  100 bits (250), Expect(3) = 6e-72
 Identities = 46/64 (71%), Positives = 53/64 (82%)
 Frame = -1

Query: 447 AESYFNSLSDEDKSEKTYGALLNCYVRAGLPDKSVSHLQKMKENGFASTPLCYNDLMCLY 268
           AE+YFN+L D+DK+EKTYGALLNCYVR    DKS+ HLQKMKE GFA + L YND+MCLY
Sbjct: 116 AENYFNNLRDQDKNEKTYGALLNCYVRQRETDKSILHLQKMKEMGFAKSSLTYNDIMCLY 175

Query: 267 TNTG 256
           TN G
Sbjct: 176 TNVG 179



 Score = 89.4 bits (220), Expect(3) = 6e-72
 Identities = 40/58 (68%), Positives = 49/58 (84%)
 Frame = -2

Query: 179 KVPGLLNEMKENGVVPDNFSYRICINSYGARSNIDEMEKVLVEMESQSHISMDWSTYA 6
           KVP +LNEMKEN V+PDNFSYR+CINS+GAR +++ MEK+L EME Q  I MDW+TYA
Sbjct: 183 KVPQVLNEMKENNVLPDNFSYRLCINSFGARDDLEGMEKILNEMEHQPDIVMDWNTYA 240