BLASTX nr result

ID: Coptis23_contig00004442 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00004442
         (868 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI15854.3| unnamed protein product [Vitis vinifera]              144   3e-32
ref|XP_003554524.1| PREDICTED: uncharacterized protein LOC100797...   112   1e-22
ref|XP_002325660.1| predicted protein [Populus trichocarpa] gi|2...   101   2e-19
ref|XP_002520100.1| conserved hypothetical protein [Ricinus comm...   100   6e-19
ref|XP_003577894.1| PREDICTED: uncharacterized protein LOC100844...    99   2e-18

>emb|CBI15854.3| unnamed protein product [Vitis vinifera]
          Length = 355

 Score =  144 bits (363), Expect = 3e-32
 Identities = 71/121 (58%), Positives = 90/121 (74%)
 Frame = +1

Query: 1   LYDVVRVDGEEERSHQMGEPKDMSMEESTILCNYLPLIREFLPSVAEEIQSDMQSYLSNQ 180
           LYDVVRVD EE  S      +DMS+E+  ILCNYLPLIR+F+PS A EI+SD+ +Y+S Q
Sbjct: 159 LYDVVRVDVEETSSQVQ---EDMSLEDQMILCNYLPLIRDFIPSAAAEIESDIHAYMSKQ 215

Query: 181 GSTXXXXXXXXXXQDELNSTDENSLNTFPLVQVNEDDDFYDGPMQSDYESDDSNAEDNPL 360
            S           +D++N TDE++LN FPLVQV+EDD+FY GP +S++ESDDSNAEDNPL
Sbjct: 216 ASPDEYVYDLYAVKDDMNITDEDALNPFPLVQVDEDDEFYAGPPESEFESDDSNAEDNPL 275

Query: 361 N 363
           N
Sbjct: 276 N 276


>ref|XP_003554524.1| PREDICTED: uncharacterized protein LOC100797972 [Glycine max]
          Length = 356

 Score =  112 bits (280), Expect = 1e-22
 Identities = 53/121 (43%), Positives = 81/121 (66%)
 Frame = +1

Query: 1   LYDVVRVDGEEERSHQMGEPKDMSMEESTILCNYLPLIREFLPSVAEEIQSDMQSYLSNQ 180
           LYD+VR+D EE+      E  +MS+E+  +L +YLPL+REF+P+ A E+++D+ + L   
Sbjct: 161 LYDIVRIDNEEKNKEVQQE--EMSLEDQRLLSSYLPLLREFIPNAAAEVETDLIAQLVGH 218

Query: 181 GSTXXXXXXXXXXQDELNSTDENSLNTFPLVQVNEDDDFYDGPMQSDYESDDSNAEDNPL 360
                        +DE++   ++S  ++PLVQV+E++D+YDG   SDYESDDSNAE+NPL
Sbjct: 219 SKEENYVYDLYTVKDEMDINIDDSSCSYPLVQVDEEEDYYDGTQHSDYESDDSNAENNPL 278

Query: 361 N 363
           N
Sbjct: 279 N 279


>ref|XP_002325660.1| predicted protein [Populus trichocarpa] gi|222862535|gb|EEF00042.1|
           predicted protein [Populus trichocarpa]
          Length = 352

 Score =  101 bits (252), Expect = 2e-19
 Identities = 58/129 (44%), Positives = 84/129 (65%), Gaps = 9/129 (6%)
 Frame = +1

Query: 4   YDVVRVDGEEERSHQMGEPKDMSMEESTILCNYLPLIREFLPSVAEEIQSDMQSYLSNQG 183
           YDVVRV   EE  +++ E +  S+E+  IL +YLPL+REFLPS   E++SD+ +YLSNQG
Sbjct: 159 YDVVRV---EESFNEVQELEVASLEDQKILSSYLPLLREFLPSAVAEVESDIHAYLSNQG 215

Query: 184 S--------TXXXXXXXXXXQDELNSTDENSLNTFPLVQVNEDDDFYDGP-MQSDYESDD 336
           S                   +D+++  D  + + FPLV+V E++DFYDGP  +S+Y++DD
Sbjct: 216 SAFDAIPLDVDDYVYDYYTVKDDMDIDDIETASPFPLVKV-EEEDFYDGPDDESEYDTDD 274

Query: 337 SNAEDNPLN 363
           SNAED+P N
Sbjct: 275 SNAEDHPRN 283


>ref|XP_002520100.1| conserved hypothetical protein [Ricinus communis]
           gi|223540728|gb|EEF42289.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 363

 Score =  100 bits (248), Expect = 6e-19
 Identities = 59/121 (48%), Positives = 80/121 (66%), Gaps = 1/121 (0%)
 Frame = +1

Query: 4   YDVVRVDGEEERSHQMGEPKDMSMEESTILCNYLPLIREFLPSVAEEIQSDMQSYLSNQG 183
           YDVVRVD    RS  M E + MS+E+  IL +YLPL+REF+PS A +I+ D+ + +S   
Sbjct: 165 YDVVRVD-VGGRSTVMQEQEVMSLEDQKILSSYLPLLREFIPSAAADIECDINNCMSKPD 223

Query: 184 STXXXXXXXXXXQDELNSTDENSLNTFPLVQVNEDDDFYDGPM-QSDYESDDSNAEDNPL 360
                       +D++   DE+SL+ FPLVQV ED+DFYDGP  +S+YES+DSNAE +P 
Sbjct: 224 D---YVYDYYTVRDDMGMGDEDSLSPFPLVQV-EDEDFYDGPDDESEYESEDSNAEHHPR 279

Query: 361 N 363
           N
Sbjct: 280 N 280


>ref|XP_003577894.1| PREDICTED: uncharacterized protein LOC100844821 [Brachypodium
           distachyon]
          Length = 333

 Score = 98.6 bits (244), Expect = 2e-18
 Identities = 53/120 (44%), Positives = 74/120 (61%)
 Frame = +1

Query: 1   LYDVVRVDGEEERSHQMGEPKDMSMEESTILCNYLPLIREFLPSVAEEIQSDMQSYLSNQ 180
           LYD ++V+ +EE+     EP+  S EE  ILCN+LPLIRE LPS AEEI+SD+ S   ++
Sbjct: 175 LYDAIQVESDEEK--HPAEPRMTSFEEGAILCNFLPLIREHLPSAAEEIESDIISLAQSE 232

Query: 181 GSTXXXXXXXXXXQDELNSTDENSLNTFPLVQVNEDDDFYDGPMQSDYESDDSNAEDNPL 360
            S            D   + ++ S  ++PL+QV++DD  Y    +  YE+DDSNAEDNPL
Sbjct: 233 YSDVYDIYTVKEVDD--TNMEDTSAASYPLLQVDDDDSEYCNDEEYPYETDDSNAEDNPL 290


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