BLASTX nr result
ID: Coptis23_contig00004430
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Coptis23_contig00004430
(1613 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002323765.1| predicted protein [Populus trichocarpa] gi|2... 735 0.0
ref|XP_002272202.2| PREDICTED: F-box/LRR-repeat protein 14 [Viti... 728 0.0
ref|XP_004135871.1| PREDICTED: F-box/LRR-repeat protein 14-like ... 709 0.0
ref|XP_003546921.1| PREDICTED: F-box/LRR-repeat protein 14-like ... 695 0.0
ref|XP_002530448.1| ubiquitin-protein ligase, putative [Ricinus ... 676 0.0
>ref|XP_002323765.1| predicted protein [Populus trichocarpa] gi|222866767|gb|EEF03898.1|
predicted protein [Populus trichocarpa]
Length = 467
Score = 735 bits (1898), Expect = 0.0
Identities = 352/469 (75%), Positives = 413/469 (88%), Gaps = 1/469 (0%)
Frame = +3
Query: 81 MDTLPDQLVWEILSRIKKTSDRNSASLTCKRLHEVEKEQRECLRVGCGLHPANEAVTSLC 260
MD LPDQLVW+ILSR+KKT D+NSASL CKR++E++ EQR+ +RVGCGL PAN+A+TSLC
Sbjct: 1 MDDLPDQLVWDILSRVKKTVDKNSASLACKRIYELDNEQRQSMRVGCGLDPANQALTSLC 60
Query: 261 NRFSNLKKVDIVYSGWMSILGKQLDDHGLHILSERCSSLVDLTLSYCTFITDVGLGHLAS 440
NRF NL KV+I Y+GWMS LGKQLDD GL IL+ C SL DLTLSYCTFITDVGL HLAS
Sbjct: 61 NRFPNLAKVEITYAGWMSKLGKQLDDQGLVILANNCPSLTDLTLSYCTFITDVGLRHLAS 120
Query: 441 CTKLTTLKLNFTPGVTGCGILSLAVGCKNLTTLHLIRCLNVSSVEWLEYLGKLETLQDLS 620
C+KL+ LKLNFTP +TGCGILSL VGCKNLT LHLIRCLNV+SVEWLEY+GKLETL+DLS
Sbjct: 121 CSKLSALKLNFTPRITGCGILSLVVGCKNLTILHLIRCLNVTSVEWLEYIGKLETLEDLS 180
Query: 621 IKNCRAIGEGDLIKLGPGWRKLKRLEFEVDANYRYMKVHDRLAMDRW-KNCVPCDSMEEL 797
IKNCRA+GEGDLIKLG WRKLKRL+FEVDANYRYMKV+DRLA+DRW K +PC+SM EL
Sbjct: 181 IKNCRALGEGDLIKLGSSWRKLKRLQFEVDANYRYMKVYDRLAVDRWQKQWIPCESMLEL 240
Query: 798 SLVNCLISPERGLSCVFGRCKSLMKLHLDMCIGVRDCDIVSLARRSSNLKSISVRVPSDY 977
SLVNC+ISP RGL+C+ G+CK+L K+HLDMC+GVRDCDI+ LA++SSNL+SIS+RVPSD+
Sbjct: 241 SLVNCIISPGRGLACMLGKCKNLEKIHLDMCVGVRDCDIIGLAKKSSNLRSISLRVPSDF 300
Query: 978 SLPLPRLINYSLRLTDQSLRAVAHNCSMLESVEISFSDGEFPCLTSFTLNGILALIELCP 1157
SLPL L+N LRLTD+SL+A+A NCSMLESV ISFSDGEFP +SFT NGIL LI++CP
Sbjct: 301 SLPL--LMNNPLRLTDESLKALAQNCSMLESVRISFSDGEFPSFSSFTQNGILNLIQMCP 358
Query: 1158 VRILVLDRVYSFNDLGMEALCSAVFLETLELVRCQEITDEGLQLVTHFPRLCVLRLSKCL 1337
+R L LD VYSFND+GMEALCSA +LETLELVRCQEI+DEGLQLV FPRLC+LRL KCL
Sbjct: 359 IRELALDHVYSFNDVGMEALCSAHYLETLELVRCQEISDEGLQLVGQFPRLCILRLKKCL 418
Query: 1338 GLTDVGLRPLVESDKLEMLTVEGCPQVSERGIQGAAKFVSYKQDMSWLY 1484
G+TD GL PL +DKL+ L VE CPQ+SERG+QGAA+ VS++QD+SW+Y
Sbjct: 419 GVTDDGLYPLAGTDKLDFLAVEDCPQISERGVQGAARSVSFRQDLSWMY 467
>ref|XP_002272202.2| PREDICTED: F-box/LRR-repeat protein 14 [Vitis vinifera]
Length = 475
Score = 728 bits (1880), Expect = 0.0
Identities = 354/474 (74%), Positives = 410/474 (86%), Gaps = 1/474 (0%)
Frame = +3
Query: 66 ETMAPMDTLPDQLVWEILSRIKKTSDRNSASLTCKRLHEVEKEQRECLRVGCGLHPANEA 245
+ + MD LP+QL+WEIL RI KT DRNSASL CKR H+V+ EQR LRVGCGL+PANEA
Sbjct: 4 KNLVAMDGLPEQLLWEILGRINKTVDRNSASLACKRFHKVDNEQRRSLRVGCGLNPANEA 63
Query: 246 VTSLCNRFSNLKKVDIVYSGWMSILGKQLDDHGLHILSERCSSLVDLTLSYCTFITDVGL 425
+TSLCNRF NL KV+I YSGWMS GKQLDD GL ILS C SL D+TLSYCTFITDVGL
Sbjct: 64 LTSLCNRFPNLVKVEITYSGWMSKSGKQLDDQGLLILSVLCPSLTDVTLSYCTFITDVGL 123
Query: 426 GHLASCTKLTTLKLNFTPGVTGCGILSLAVGCKNLTTLHLIRCLNVSSVEWLEYLGKLET 605
HLASC+KL+ LKLNFTP +TGCGILSL VGCK LT LHLIRCLNVSSVEWLEYLGKLET
Sbjct: 124 SHLASCSKLSALKLNFTPRITGCGILSLVVGCKKLTVLHLIRCLNVSSVEWLEYLGKLET 183
Query: 606 LQDLSIKNCRAIGEGDLIKLGPGWRKLKRLEFEVDANYRYMKVHDRLAMDRW-KNCVPCD 782
L+DLSIKNCRAIGEGDLIKLGP WRK+KRL+FEVD NYRYMKV+DRLA+DRW K VPC+
Sbjct: 184 LEDLSIKNCRAIGEGDLIKLGPTWRKIKRLQFEVDVNYRYMKVYDRLAVDRWQKQLVPCE 243
Query: 783 SMEELSLVNCLISPERGLSCVFGRCKSLMKLHLDMCIGVRDCDIVSLARRSSNLKSISVR 962
+M ELSLVNC+ISP RGL+C+ +CK+L K+ LDMC+GVRDCDIV LA++SSNL+SIS+R
Sbjct: 244 NMLELSLVNCIISPGRGLACLLEKCKNLEKIRLDMCVGVRDCDIVGLAQKSSNLRSISLR 303
Query: 963 VPSDYSLPLPRLINYSLRLTDQSLRAVAHNCSMLESVEISFSDGEFPCLTSFTLNGILAL 1142
PSD+SLPL L++ LRLTD+SL+A+A NCSMLES+ ISF+DGEFP +SFTLNGIL +
Sbjct: 304 GPSDFSLPL--LLSNPLRLTDESLKALAQNCSMLESIRISFTDGEFPSFSSFTLNGILTV 361
Query: 1143 IELCPVRILVLDRVYSFNDLGMEALCSAVFLETLELVRCQEITDEGLQLVTHFPRLCVLR 1322
I++CP+R L LD VYSFND+GMEALCSA +LETLELVRCQEITDEGLQLV FP LCVLR
Sbjct: 362 IQMCPIRKLSLDHVYSFNDVGMEALCSAPYLETLELVRCQEITDEGLQLVAQFPHLCVLR 421
Query: 1323 LSKCLGLTDVGLRPLVESDKLEMLTVEGCPQVSERGIQGAAKFVSYKQDMSWLY 1484
LSKCLG+TD G +PLV S KLE+L+VE CPQ+SERG+QGAA+ VS+KQD+SW+Y
Sbjct: 422 LSKCLGVTDDGFKPLVGSYKLELLSVENCPQISERGVQGAARSVSFKQDLSWIY 475
>ref|XP_004135871.1| PREDICTED: F-box/LRR-repeat protein 14-like [Cucumis sativus]
gi|449491060|ref|XP_004158787.1| PREDICTED:
F-box/LRR-repeat protein 14-like [Cucumis sativus]
Length = 481
Score = 709 bits (1831), Expect = 0.0
Identities = 345/488 (70%), Positives = 414/488 (84%), Gaps = 1/488 (0%)
Frame = +3
Query: 24 IWSTFNVTEF*YNIETMAPMDTLPDQLVWEILSRIKKTSDRNSASLTCKRLHEVEKEQRE 203
+W +F + E + + MD+LP+ L+WEIL+R+KKT DRNS +L+CKRLH ++KE R+
Sbjct: 1 MWKSFLLLE-----KFLVTMDSLPEVLIWEILNRVKKTVDRNSLALSCKRLHRLDKENRQ 55
Query: 204 CLRVGCGLHPANEAVTSLCNRFSNLKKVDIVYSGWMSILGKQLDDHGLHILSERCSSLVD 383
LRVGCGL PA+EA+TSLC RF NL +++I YSGWMS LGKQLDD GL ILS C SL D
Sbjct: 56 FLRVGCGLDPADEALTSLCLRFPNLVRIEITYSGWMSKLGKQLDDRGLFILSNHCPSLTD 115
Query: 384 LTLSYCTFITDVGLGHLASCTKLTTLKLNFTPGVTGCGILSLAVGCKNLTTLHLIRCLNV 563
LTLSYCTFITDVGL +L SC KL+ LKLNFTP +TGCGI S+AVGCKNLT LHLIRCLNV
Sbjct: 116 LTLSYCTFITDVGLRNLISCYKLSALKLNFTPRITGCGIFSIAVGCKNLTVLHLIRCLNV 175
Query: 564 SSVEWLEYLGKLETLQDLSIKNCRAIGEGDLIKLGPGWRKLKRLEFEVDANYRYMKVHDR 743
SSVEWLEYLGKLETL+DLSI+NCRAIGEGDLIKLG WRKLKRL+FEVDANYRYMKV+DR
Sbjct: 176 SSVEWLEYLGKLETLEDLSIRNCRAIGEGDLIKLGHSWRKLKRLQFEVDANYRYMKVYDR 235
Query: 744 LAMDRW-KNCVPCDSMEELSLVNCLISPERGLSCVFGRCKSLMKLHLDMCIGVRDCDIVS 920
LA+DRW K + CD M ELSLVNC+ISP RGL+CV G+CK+L K+HLDMC+GVRDCDI+S
Sbjct: 236 LAVDRWQKQWISCDDMLELSLVNCIISPGRGLACVLGKCKNLQKVHLDMCVGVRDCDIIS 295
Query: 921 LARRSSNLKSISVRVPSDYSLPLPRLINYSLRLTDQSLRAVAHNCSMLESVEISFSDGEF 1100
LAR S NL+SIS+RVPSD+SLPL L N +LRLTD+SL+A+A NCS LESV ISF+DGEF
Sbjct: 296 LARESRNLRSISLRVPSDFSLPL--LANNTLRLTDESLKALAENCSHLESVRISFADGEF 353
Query: 1101 PCLTSFTLNGILALIELCPVRILVLDRVYSFNDLGMEALCSAVFLETLELVRCQEITDEG 1280
P L+SF+LNGIL L+ +CPVR L LD VYSFND+G+EALCSA +LE+LELVRCQEI+D+G
Sbjct: 354 PSLSSFSLNGILVLVRMCPVRELALDHVYSFNDMGLEALCSASYLESLELVRCQEISDDG 413
Query: 1281 LQLVTHFPRLCVLRLSKCLGLTDVGLRPLVESDKLEMLTVEGCPQVSERGIQGAAKFVSY 1460
LQLV+ FP+L LRLSKCLG+TD GL+ LV++ KLE L VE CPQ+SERG+ GAA+ +S+
Sbjct: 414 LQLVSQFPQLQNLRLSKCLGITDDGLKLLVDTYKLESLVVEDCPQISERGVHGAARAISF 473
Query: 1461 KQDMSWLY 1484
+QD+SW+Y
Sbjct: 474 RQDLSWMY 481
>ref|XP_003546921.1| PREDICTED: F-box/LRR-repeat protein 14-like [Glycine max]
Length = 492
Score = 695 bits (1793), Expect = 0.0
Identities = 337/469 (71%), Positives = 403/469 (85%), Gaps = 1/469 (0%)
Frame = +3
Query: 81 MDTLPDQLVWEILSRIKKTSDRNSASLTCKRLHEVEKEQRECLRVGCGLHPANEAVTSLC 260
MD +P+ +VWEILSR+KKTSDRNS SL CKRL+ ++ QR +RVGCG+ PA+EA+T LC
Sbjct: 26 MDNIPEHIVWEILSRLKKTSDRNSVSLVCKRLYYLDNAQRTFVRVGCGMDPADEALTCLC 85
Query: 261 NRFSNLKKVDIVYSGWMSILGKQLDDHGLHILSERCSSLVDLTLSYCTFITDVGLGHLAS 440
RF NL KV+I YSGWMS LGKQLDD GL IL+ C L DL+LSYCTFITDVGL +LAS
Sbjct: 86 TRFQNLSKVEITYSGWMSKLGKQLDDKGLLILANHCPLLCDLSLSYCTFITDVGLRYLAS 145
Query: 441 CTKLTTLKLNFTPGVTGCGILSLAVGCKNLTTLHLIRCLNVSSVEWLEYLGKLETLQDLS 620
+KL++L+LNFTP +TGCGILSL VGCKNL++LHLIRCLNVSSVEWLEYLGKL L+DLS
Sbjct: 146 SSKLSSLRLNFTPRITGCGILSLVVGCKNLSSLHLIRCLNVSSVEWLEYLGKLGRLEDLS 205
Query: 621 IKNCRAIGEGDLIKLGPGWRKLKRLEFEVDANYRYMKVHDRLAMDRW-KNCVPCDSMEEL 797
IKNCRAIGEGDLIKLGPGW+KL RL+FEVDANYRYMKV+DRL++DRW K VPC++M EL
Sbjct: 206 IKNCRAIGEGDLIKLGPGWQKLTRLQFEVDANYRYMKVYDRLSVDRWQKQHVPCENMLEL 265
Query: 798 SLVNCLISPERGLSCVFGRCKSLMKLHLDMCIGVRDCDIVSLARRSSNLKSISVRVPSDY 977
SLVNC+ISP RGL+CV +CK+L K+HLDMC+GVRD DI+ L++RSSNLKS+S+RVPSD+
Sbjct: 266 SLVNCIISPGRGLACVLRKCKNLQKIHLDMCVGVRDFDIICLSQRSSNLKSVSLRVPSDF 325
Query: 978 SLPLPRLINYSLRLTDQSLRAVAHNCSMLESVEISFSDGEFPCLTSFTLNGILALIELCP 1157
S LP L+N LRLTD+SL+A+A NCS LESV ISFSDGEFP +SFTL+GIL LI+ CP
Sbjct: 326 S--LPSLVNNPLRLTDESLKALAQNCSKLESVRISFSDGEFPSSSSFTLSGILCLIQRCP 383
Query: 1158 VRILVLDRVYSFNDLGMEALCSAVFLETLELVRCQEITDEGLQLVTHFPRLCVLRLSKCL 1337
VR L LD VYSFND+GMEALCS +LE+LELVRCQEI+DEGLQLV+ FPRLC+LRLSKCL
Sbjct: 384 VRQLALDHVYSFNDVGMEALCSLEYLESLELVRCQEISDEGLQLVSQFPRLCILRLSKCL 443
Query: 1338 GLTDVGLRPLVESDKLEMLTVEGCPQVSERGIQGAAKFVSYKQDMSWLY 1484
G++D GL+PLV S KL+ L +E CPQ+SERG+Q AAK VS++QD+SW+Y
Sbjct: 444 GISDDGLKPLVGSLKLDFLAIEDCPQISERGVQRAAKSVSFRQDLSWMY 492
>ref|XP_002530448.1| ubiquitin-protein ligase, putative [Ricinus communis]
gi|223529993|gb|EEF31918.1| ubiquitin-protein ligase,
putative [Ricinus communis]
Length = 443
Score = 676 bits (1745), Expect = 0.0
Identities = 330/469 (70%), Positives = 386/469 (82%), Gaps = 1/469 (0%)
Frame = +3
Query: 81 MDTLPDQLVWEILSRIKKTSDRNSASLTCKRLHEVEKEQRECLRVGCGLHPANEAVTSLC 260
MD LPDQLVWEI SR+KKT DRN+ASL CKRL+E++ EQR+ LRVGCGLHPAN+A+TSLC
Sbjct: 1 MDDLPDQLVWEIFSRVKKTIDRNAASLACKRLYELDNEQRQSLRVGCGLHPANQALTSLC 60
Query: 261 NRFSNLKKVDIVYSGWMSILGKQLDDHGLHILSERCSSLVDLTLSYCTFITDVGLGHLAS 440
NRF NL KV+I YSGWMS LGKQLDD GL +L+ C SL DL LSYCTFITDVGL +LAS
Sbjct: 61 NRFPNLVKVEITYSGWMSKLGKQLDDQGLLLLANNCPSLSDLALSYCTFITDVGLRYLAS 120
Query: 441 CTKLTTLKLNFTPGVTGCGILSLAVGCKNLTTLHLIRCLNVSSVEWLEYLGKLETLQDLS 620
C+KL+ LKLNFTP +TGCGILSL +GCKNL HL RCLNV+SVEWLEYLGKLETL+DLS
Sbjct: 121 CSKLSKLKLNFTPRITGCGILSLVIGCKNLIIFHLNRCLNVTSVEWLEYLGKLETLEDLS 180
Query: 621 IKNCRAIGEGDLIKLGPGWRKLKRLEFEVDANYRYMKVHDRLAMDRW-KNCVPCDSMEEL 797
IKNCR IGEGDLIK+G GWRKLKRL+FEVDANYRYMKV+DRLA+DRW K VPC+S+ EL
Sbjct: 181 IKNCRVIGEGDLIKIGSGWRKLKRLQFEVDANYRYMKVYDRLAVDRWQKQLVPCESLLEL 240
Query: 798 SLVNCLISPERGLSCVFGRCKSLMKLHLDMCIGVRDCDIVSLARRSSNLKSISVRVPSDY 977
SLVNC+ISP RGL+CV G+CK+L K+HLDMC+GVRD DI+ LA++S NL+SIS+RVPSD+
Sbjct: 241 SLVNCIISPGRGLACVLGKCKNLEKIHLDMCVGVRDYDIIGLAQKSRNLRSISLRVPSDF 300
Query: 978 SLPLPRLINYSLRLTDQSLRAVAHNCSMLESVEISFSDGEFPCLTSFTLNGILALIELCP 1157
SLPL L+N LRLTD+SL+A+A NC MLESV CP
Sbjct: 301 SLPL--LLNNPLRLTDESLKALAQNCPMLESV------------------------RTCP 334
Query: 1158 VRILVLDRVYSFNDLGMEALCSAVFLETLELVRCQEITDEGLQLVTHFPRLCVLRLSKCL 1337
+R L LD VYSFND+GMEALCSA +LE LELVRCQE++DEGLQLVT FPRLC+LRL KCL
Sbjct: 335 IRELALDHVYSFNDIGMEALCSAQYLENLELVRCQEVSDEGLQLVTQFPRLCILRLKKCL 394
Query: 1338 GLTDVGLRPLVESDKLEMLTVEGCPQVSERGIQGAAKFVSYKQDMSWLY 1484
GLTD GL+PL+ S K+E LTVE CPQ+SERG+QG A+ VS++QD+SW+Y
Sbjct: 395 GLTDDGLKPLIGSYKMEFLTVEDCPQISERGVQGTARSVSFRQDLSWMY 443