BLASTX nr result

ID: Coptis23_contig00004426 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00004426
         (1375 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002263263.1| PREDICTED: glyceraldehyde-3-phosphate dehydr...   645   0.0  
ref|XP_002312235.1| predicted protein [Populus trichocarpa] gi|2...   633   e-179
gb|ABK95756.1| unknown [Populus trichocarpa]                          629   e-178
ref|XP_002513328.1| glyceraldehyde 3-phosphate dehydrogenase, pu...   627   e-177
ref|XP_002315071.1| predicted protein [Populus trichocarpa] gi|2...   625   e-177

>ref|XP_002263263.1| PREDICTED: glyceraldehyde-3-phosphate dehydrogenase, cytosolic [Vitis
            vinifera] gi|297736130|emb|CBI24168.3| unnamed protein
            product [Vitis vinifera]
          Length = 429

 Score =  645 bits (1664), Expect = 0.0
 Identities = 318/370 (85%), Positives = 342/370 (92%)
 Frame = -3

Query: 1367 DSLSLQKCSGRSIQPIKATATETPPTIPKSWSGGKTKIGINGFGRIGRLVLRIATSRDDI 1188
            +S SLQKCS RS+QPIKATATE PPT+ KSWS G+TKIGINGFGRIGRLVLR+ATSRDDI
Sbjct: 59   NSSSLQKCSARSLQPIKATATELPPTVQKSWSSGQTKIGINGFGRIGRLVLRVATSRDDI 118

Query: 1187 DVVAVNDPFIDASYMAYMFKYDSTHGVFKGTINVIDASTLEINGKKVVVTSKRDPAEIPW 1008
            DVVAVNDPF+DA YMAYMFKYDSTHGVFKGTI V+D STLEINGK++ VTSKRDP+EIPW
Sbjct: 119  DVVAVNDPFVDAKYMAYMFKYDSTHGVFKGTIKVLDESTLEINGKQIKVTSKRDPSEIPW 178

Query: 1007 GEHGADYVVESSGVFTTLEKGSLHIKGGAKKVIISAPSADAPMFVVGVNERTYKPSMNVV 828
            G++G DYVVESSGVFTT EK S HIKGGAKKV+ISAPSADAPMFVVGVNE +YKPSMN+V
Sbjct: 179  GDYGIDYVVESSGVFTTTEKASAHIKGGAKKVVISAPSADAPMFVVGVNETSYKPSMNIV 238

Query: 827  SNASCTTNCLAPLAKVVHEEFGILEGLMXXXXXXXXXXXXVDGPSMKDWRGGRGAAQNII 648
            SNASCTTNCLAPLAKVVHEEFGI+EGLM            VDGPSMKDWRGGRGA+QNII
Sbjct: 239  SNASCTTNCLAPLAKVVHEEFGIVEGLMTTVHATTATQKTVDGPSMKDWRGGRGASQNII 298

Query: 647  PSSTGAAKAVGKVLPELNGKLTGMAFRVPTSNVSVVDLTCRLEKSASYEDVKAAIKYASE 468
            PSSTGAAKAVGKVLPELNGKLTGMAFRVPT NVSVVDLTCRL+KSA+YEDVKAA+KYASE
Sbjct: 299  PSSTGAAKAVGKVLPELNGKLTGMAFRVPTPNVSVVDLTCRLKKSATYEDVKAAVKYASE 358

Query: 467  GPLKGILGYTDEDVVSNDFVGDARSSIFDAKAGIGLSSSFMKLVSWYDNEWGYSNRVLDL 288
            GPLKGILGYTDEDVVSNDFVGD+RSSIFDAKAGIGLS+SFMKLV+WYDNEWGYSNRVLDL
Sbjct: 359  GPLKGILGYTDEDVVSNDFVGDSRSSIFDAKAGIGLSASFMKLVAWYDNEWGYSNRVLDL 418

Query: 287  IEHMALVAVN 258
            IEHMALVA +
Sbjct: 419  IEHMALVAAS 428


>ref|XP_002312235.1| predicted protein [Populus trichocarpa] gi|222852055|gb|EEE89602.1|
            predicted protein [Populus trichocarpa]
          Length = 422

 Score =  633 bits (1632), Expect = e-179
 Identities = 317/370 (85%), Positives = 338/370 (91%)
 Frame = -3

Query: 1364 SLSLQKCSGRSIQPIKATATETPPTIPKSWSGGKTKIGINGFGRIGRLVLRIATSRDDID 1185
            S SL  CSGRSIQPIKATATE PPT+ +S + GKTKIGINGFGRIGRLVLR+AT RDDID
Sbjct: 53   SSSLHTCSGRSIQPIKATATEMPPTVLRSRADGKTKIGINGFGRIGRLVLRVATFRDDID 112

Query: 1184 VVAVNDPFIDASYMAYMFKYDSTHGVFKGTINVIDASTLEINGKKVVVTSKRDPAEIPWG 1005
            VVAVNDPFIDA YMAYMF+YDSTHGVF GTI V+D STLEINGK++ +TSKRDPAEIPWG
Sbjct: 113  VVAVNDPFIDAEYMAYMFRYDSTHGVFNGTIKVLDDSTLEINGKQIKITSKRDPAEIPWG 172

Query: 1004 EHGADYVVESSGVFTTLEKGSLHIKGGAKKVIISAPSADAPMFVVGVNERTYKPSMNVVS 825
            + GA++VVESSGVFTTLEK + H KGGAKKV+ISAPSADAPMFVVGVNE+TYKP+M+VVS
Sbjct: 173  DFGAEFVVESSGVFTTLEKAAAHKKGGAKKVVISAPSADAPMFVVGVNEKTYKPNMDVVS 232

Query: 824  NASCTTNCLAPLAKVVHEEFGILEGLMXXXXXXXXXXXXVDGPSMKDWRGGRGAAQNIIP 645
            NASCTTNCLAPLAKVVHEEFGILEGLM            VDGPSMKDWRGGRGAAQNIIP
Sbjct: 233  NASCTTNCLAPLAKVVHEEFGILEGLMTTVHATTATQKTVDGPSMKDWRGGRGAAQNIIP 292

Query: 644  SSTGAAKAVGKVLPELNGKLTGMAFRVPTSNVSVVDLTCRLEKSASYEDVKAAIKYASEG 465
            SSTGAAKAVGKVLPELNGKLTGMAFRVPT NVSVVDLTCRLEKSASYEDVKAAIKYASEG
Sbjct: 293  SSTGAAKAVGKVLPELNGKLTGMAFRVPTPNVSVVDLTCRLEKSASYEDVKAAIKYASEG 352

Query: 464  PLKGILGYTDEDVVSNDFVGDARSSIFDAKAGIGLSSSFMKLVSWYDNEWGYSNRVLDLI 285
            PL GILGYTD+DVVSNDFVGD+RSSIFDAKAGIGLS+SFMKLVSWYDNEWGYSNRVLDLI
Sbjct: 353  PLMGILGYTDDDVVSNDFVGDSRSSIFDAKAGIGLSASFMKLVSWYDNEWGYSNRVLDLI 412

Query: 284  EHMALVAVNN 255
            EHMALVA +N
Sbjct: 413  EHMALVAAHN 422


>gb|ABK95756.1| unknown [Populus trichocarpa]
          Length = 422

 Score =  629 bits (1622), Expect = e-178
 Identities = 312/370 (84%), Positives = 338/370 (91%)
 Frame = -3

Query: 1364 SLSLQKCSGRSIQPIKATATETPPTIPKSWSGGKTKIGINGFGRIGRLVLRIATSRDDID 1185
            S S Q CSGRSIQPIKATATE PPT+ KS + GKTKIGINGFGRIGRLVLR+AT RDDID
Sbjct: 53   SSSSQTCSGRSIQPIKATATEMPPTVLKSRADGKTKIGINGFGRIGRLVLRVATFRDDID 112

Query: 1184 VVAVNDPFIDASYMAYMFKYDSTHGVFKGTINVIDASTLEINGKKVVVTSKRDPAEIPWG 1005
            VVAVNDPFIDA+YMAYMFKYDSTHGVF GTI V+D S LEINGK++ +TSKRDP EIPWG
Sbjct: 113  VVAVNDPFIDANYMAYMFKYDSTHGVFSGTIKVLDDSNLEINGKQIKITSKRDPTEIPWG 172

Query: 1004 EHGADYVVESSGVFTTLEKGSLHIKGGAKKVIISAPSADAPMFVVGVNERTYKPSMNVVS 825
            + GA+YVVESSG+FTT+EK + H+KGGAKKV+ISAPSADAPMFVVGVNE+TYKP+M++VS
Sbjct: 173  DFGAEYVVESSGIFTTVEKAAAHMKGGAKKVVISAPSADAPMFVVGVNEKTYKPNMDIVS 232

Query: 824  NASCTTNCLAPLAKVVHEEFGILEGLMXXXXXXXXXXXXVDGPSMKDWRGGRGAAQNIIP 645
            NASCTTNCLAPLAKVVHEEFGI+EGLM            VDGPS KDWRGGRGAAQNIIP
Sbjct: 233  NASCTTNCLAPLAKVVHEEFGIIEGLMTTVHATTATQKTVDGPSRKDWRGGRGAAQNIIP 292

Query: 644  SSTGAAKAVGKVLPELNGKLTGMAFRVPTSNVSVVDLTCRLEKSASYEDVKAAIKYASEG 465
            SSTGAAKAVGKVLPELNGKLTGMAFRVPT NVSVVDLTCRLEKSASYEDVKAAIKYASEG
Sbjct: 293  SSTGAAKAVGKVLPELNGKLTGMAFRVPTPNVSVVDLTCRLEKSASYEDVKAAIKYASEG 352

Query: 464  PLKGILGYTDEDVVSNDFVGDARSSIFDAKAGIGLSSSFMKLVSWYDNEWGYSNRVLDLI 285
            PLKGILGYTD+DVVS+DF+GD+RSSIFDAKAGIGLS+SFMKLVSWYDNEWGYSNRVLDLI
Sbjct: 353  PLKGILGYTDDDVVSSDFLGDSRSSIFDAKAGIGLSASFMKLVSWYDNEWGYSNRVLDLI 412

Query: 284  EHMALVAVNN 255
            EHMALVA +N
Sbjct: 413  EHMALVAAHN 422


>ref|XP_002513328.1| glyceraldehyde 3-phosphate dehydrogenase, putative [Ricinus communis]
            gi|223547236|gb|EEF48731.1| glyceraldehyde 3-phosphate
            dehydrogenase, putative [Ricinus communis]
          Length = 426

 Score =  627 bits (1617), Expect = e-177
 Identities = 312/370 (84%), Positives = 335/370 (90%)
 Frame = -3

Query: 1364 SLSLQKCSGRSIQPIKATATETPPTIPKSWSGGKTKIGINGFGRIGRLVLRIATSRDDID 1185
            S SL+ CS RS+QPIKAT TE PPTI KS S G+TKIGINGFGRIGRLVLRIAT RDD+D
Sbjct: 57   SSSLEACSARSLQPIKATVTEMPPTILKSRSDGRTKIGINGFGRIGRLVLRIATLRDDVD 116

Query: 1184 VVAVNDPFIDASYMAYMFKYDSTHGVFKGTINVIDASTLEINGKKVVVTSKRDPAEIPWG 1005
            VVAVNDPFID  YMAYM KYDSTHG+FKG I V+D STLEINGK++ V+SKRDPAEIPWG
Sbjct: 117  VVAVNDPFIDTKYMAYMLKYDSTHGLFKGHIKVVDESTLEINGKQIKVSSKRDPAEIPWG 176

Query: 1004 EHGADYVVESSGVFTTLEKGSLHIKGGAKKVIISAPSADAPMFVVGVNERTYKPSMNVVS 825
            +HGA+YVVE+SGVFTT++K S H KGGAKKV+ISAPSADAPMFVVGVNE+TYKP+M++VS
Sbjct: 177  DHGAEYVVEASGVFTTIDKASAHKKGGAKKVVISAPSADAPMFVVGVNEQTYKPNMDIVS 236

Query: 824  NASCTTNCLAPLAKVVHEEFGILEGLMXXXXXXXXXXXXVDGPSMKDWRGGRGAAQNIIP 645
            NASCTTNCLAPLAKVVHEEFGI+EGLM            VDGPSMKDWRGGRGA QNIIP
Sbjct: 237  NASCTTNCLAPLAKVVHEEFGIVEGLMTTVHATTATQKTVDGPSMKDWRGGRGAGQNIIP 296

Query: 644  SSTGAAKAVGKVLPELNGKLTGMAFRVPTSNVSVVDLTCRLEKSASYEDVKAAIKYASEG 465
            SSTGAAKAVGKVLPELNGKLTGMAFRVPT NVSVVDLTCRLEKSASYEDVKAAIKYASEG
Sbjct: 297  SSTGAAKAVGKVLPELNGKLTGMAFRVPTPNVSVVDLTCRLEKSASYEDVKAAIKYASEG 356

Query: 464  PLKGILGYTDEDVVSNDFVGDARSSIFDAKAGIGLSSSFMKLVSWYDNEWGYSNRVLDLI 285
            PLKGILGYTDEDVVSNDFVGD+RSSIFDAKAGIGLS++FMKLVSWYDNEWGYSNRVLDLI
Sbjct: 357  PLKGILGYTDEDVVSNDFVGDSRSSIFDAKAGIGLSAAFMKLVSWYDNEWGYSNRVLDLI 416

Query: 284  EHMALVAVNN 255
            EHMALVA  N
Sbjct: 417  EHMALVAAQN 426


>ref|XP_002315071.1| predicted protein [Populus trichocarpa] gi|222864111|gb|EEF01242.1|
            predicted protein [Populus trichocarpa]
          Length = 422

 Score =  625 bits (1613), Expect = e-177
 Identities = 311/370 (84%), Positives = 337/370 (91%)
 Frame = -3

Query: 1364 SLSLQKCSGRSIQPIKATATETPPTIPKSWSGGKTKIGINGFGRIGRLVLRIATSRDDID 1185
            S S Q CSGRSIQPIKATATE PPT+ KS + GKTKIGINGFGRIGRLVLR+AT RDDID
Sbjct: 53   SSSSQTCSGRSIQPIKATATEMPPTVLKSRADGKTKIGINGFGRIGRLVLRVATFRDDID 112

Query: 1184 VVAVNDPFIDASYMAYMFKYDSTHGVFKGTINVIDASTLEINGKKVVVTSKRDPAEIPWG 1005
            VVAVNDPFIDA+YMAYMFKYDSTHGVF GTI V+D S LEINGK++ +TSKRDP EIPWG
Sbjct: 113  VVAVNDPFIDANYMAYMFKYDSTHGVFSGTIKVLDDSNLEINGKQIKITSKRDPTEIPWG 172

Query: 1004 EHGADYVVESSGVFTTLEKGSLHIKGGAKKVIISAPSADAPMFVVGVNERTYKPSMNVVS 825
            + GA+YVVESSG+FTT+EK + H+K GAKKV+ISAPSADAPMFVVGVNE+TYKP+M++VS
Sbjct: 173  DFGAEYVVESSGIFTTVEKAAAHMKVGAKKVVISAPSADAPMFVVGVNEKTYKPNMDIVS 232

Query: 824  NASCTTNCLAPLAKVVHEEFGILEGLMXXXXXXXXXXXXVDGPSMKDWRGGRGAAQNIIP 645
            NASCTTNCLAPLAKVVHEEFGI+EGLM            VDGPS KDWRGGRGAAQNIIP
Sbjct: 233  NASCTTNCLAPLAKVVHEEFGIIEGLMTTVHATTATQKTVDGPSRKDWRGGRGAAQNIIP 292

Query: 644  SSTGAAKAVGKVLPELNGKLTGMAFRVPTSNVSVVDLTCRLEKSASYEDVKAAIKYASEG 465
            SSTGAAKAVGKVLPELNGKLTGMAFRVPT NVSVVDLTCRLEKSASYEDVKAAIKYASEG
Sbjct: 293  SSTGAAKAVGKVLPELNGKLTGMAFRVPTPNVSVVDLTCRLEKSASYEDVKAAIKYASEG 352

Query: 464  PLKGILGYTDEDVVSNDFVGDARSSIFDAKAGIGLSSSFMKLVSWYDNEWGYSNRVLDLI 285
            PLKGILGYTD+DVVS+DF+GD+RSSIFDAKAGIGLS+SFMKLVSWYDNEWGYSNRVLDLI
Sbjct: 353  PLKGILGYTDDDVVSSDFLGDSRSSIFDAKAGIGLSASFMKLVSWYDNEWGYSNRVLDLI 412

Query: 284  EHMALVAVNN 255
            EHMALVA +N
Sbjct: 413  EHMALVAAHN 422


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