BLASTX nr result

ID: Coptis23_contig00004421 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00004421
         (1063 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004141819.1| PREDICTED: uncharacterized protein LOC101213...   240   4e-61
ref|XP_002271999.1| PREDICTED: uncharacterized protein LOC100251...   221   2e-55
ref|NP_001189890.1| uncharacterized protein [Arabidopsis thalian...   207   3e-51
ref|NP_001118623.1| uncharacterized protein [Arabidopsis thalian...   207   3e-51
ref|XP_002885016.1| hypothetical protein ARALYDRAFT_478831 [Arab...   203   5e-50

>ref|XP_004141819.1| PREDICTED: uncharacterized protein LOC101213033 [Cucumis sativus]
            gi|449480667|ref|XP_004155962.1| PREDICTED:
            uncharacterized LOC101213033 [Cucumis sativus]
          Length = 1411

 Score =  240 bits (613), Expect = 4e-61
 Identities = 156/357 (43%), Positives = 202/357 (56%), Gaps = 10/357 (2%)
 Frame = +3

Query: 3    RIYLQGAGNQISSAKGGDGIGASTSADITKKELLRAIDVRLVAVRQDLTTACARASSAGF 182
            RIY QG G++ S   GGDG GA  S D TKKELL+AIDVRL+AVRQDL TA  RA +AGF
Sbjct: 110  RIYSQGEGDRHSGTSGGDGTGAG-STDETKKELLKAIDVRLLAVRQDLVTAATRALAAGF 168

Query: 183  NIDTISELQSFADRFGAHRLNEACAKFIHLSQNRPDLVNQWKVRRQDGAVRSSSESDMSI 362
            N  T+S+LQ FAD+FGAHRL EAC+ F+ LS+ RP+LVN W     D AVRSS  SDMSI
Sbjct: 169  NPSTVSDLQLFADQFGAHRLTEACSSFLSLSRRRPELVNTWTPGMDDRAVRSSCGSDMSI 228

Query: 363  DDPNEENFSVRSNGFNQFQPQPEHQYQH--QLRSDQQTSQDQDAGQYRPSMRQEPNSYVA 536
            DDP E+   +  +   Q+Q + +H  Q     R+++Q+S   ++         +P +   
Sbjct: 229  DDPTED--PIGRHNKPQYQTENKHDPQSGTTSRTEEQSSHVDES---------KPTTCQP 277

Query: 537  AVHDSLKEPXXXXXXXXXXXGFNKKKDEEPLP---ESAPISQPTRRLSVQDRINLFEN-X 704
            A   +                  K+K+ E  P   +S P+  P RRLSVQDRINLFEN  
Sbjct: 278  AKSSATVPSRRNVKDETLLENLEKEKNGEETPTELKSTPVGPPARRLSVQDRINLFENKQ 337

Query: 705  XXXXXXXXXXXXXXXXXXXLRRMSSDVSSAGQAAERAVLRRWSGASDMSMDLSNENLAVS 884
                               LRR+SSDVSSA  A E+AVLRRWSG SDMS+D SNE   + 
Sbjct: 338  KENTGGSGGGKPVSGKPLELRRLSSDVSSAPSAVEKAVLRRWSGVSDMSIDFSNEKKDIE 397

Query: 885  TSCSTMNSVS----KSSVYPNLSVDKNNKVLKDTATSSINELRGLLGTVEDSQLKDQ 1043
            +   T +S S    KS+V+ + +  ++ K L D  + +  E RG L  V D + K Q
Sbjct: 398  SPLCTPSSSSISDTKSNVFSSATEIESEKRLADLESKTGLEKRGSLVRVGDDESKQQ 454


>ref|XP_002271999.1| PREDICTED: uncharacterized protein LOC100251482 [Vitis vinifera]
          Length = 1409

 Score =  221 bits (564), Expect = 2e-55
 Identities = 153/339 (45%), Positives = 180/339 (53%), Gaps = 5/339 (1%)
 Frame = +3

Query: 6    IYLQGAGNQISSAKGGDGIGASTSADITKKELLRAIDVRLVAVRQDLTTACARASSAGFN 185
            IY QG G+ +SSA GGD  G+  +AD TKKELLRAIDVRLVAVRQDLT AC+RAS+AGFN
Sbjct: 111  IYSQGVGDPVSSASGGDVTGSVAAADATKKELLRAIDVRLVAVRQDLTMACSRASAAGFN 170

Query: 186  IDTISELQSFADRFGAHRLNEACAKFIHLSQNRPDLVN--QWKVRRQDGAVRSSSESDMS 359
             +T++ELQ F+DRFGAHRL+EAC+KF  L Q RPDL++   WK    D AVRSSS SDMS
Sbjct: 171  PETVAELQIFSDRFGAHRLSEACSKFFSLCQRRPDLISTATWKGGADDRAVRSSSGSDMS 230

Query: 360  IDDPNEENFSVRSNGFNQFQPQPEHQYQHQLRSDQQTSQDQDAGQYRPSMRQEPNSYVAA 539
            ID+P E                          + Q  +Q+ D    +PS  Q   S    
Sbjct: 231  IDEPPE--------------------------NKQPAAQEPDVP--KPSTCQPTKSTTLN 262

Query: 540  V--HDSLKEPXXXXXXXXXXXGFNKKKDEEPLPESAPISQPTRRLSVQDRINLFEN-XXX 710
                 SL E                   E     S   SQP RRLSVQDRINLFEN    
Sbjct: 263  FPGRRSLGEKEKEKEGDGGPEKETPTPTETSSASSIQGSQPARRLSVQDRINLFENKQKE 322

Query: 711  XXXXXXXXXXXXXXXXXLRRMSSDVSSAGQAAERAVLRRWSGASDMSMDLSNENLAVSTS 890
                             LRR+SSDVSSA    E+AVLRRWSGASDMS+DLS E     + 
Sbjct: 323  SSTSGSGGKVVVGKSVELRRLSSDVSSAPAVVEKAVLRRWSGASDMSIDLSFEKKDTESP 382

Query: 891  CSTMNSVSKSSVYPNLSVDKNNKVLKDTATSSINELRGL 1007
              T          P+ S     K L DTAT +  E +G+
Sbjct: 383  LCT----------PSTSSLPQTKSLTDTATPNSAEPKGV 411


>ref|NP_001189890.1| uncharacterized protein [Arabidopsis thaliana]
           gi|332641961|gb|AEE75482.1| uncharacterized protein
           [Arabidopsis thaliana]
          Length = 1262

 Score =  207 bits (528), Expect = 3e-51
 Identities = 137/312 (43%), Positives = 185/312 (59%), Gaps = 4/312 (1%)
 Frame = +3

Query: 3   RIYLQGAGNQISSAKGGDGIGASTSADITKKELLRAIDVRLVAVRQDLTTACARASSAGF 182
           +IY +G  +Q SSAK  D    + +AD+TKKELL+AID+RL AVRQDL TAC RAS+AGF
Sbjct: 102 KIYGEGTSDQRSSAK--DSTDTTPAADVTKKELLKAIDLRLAAVRQDLATACNRASAAGF 159

Query: 183 NIDTISELQSFADRFGAHRLNEACAKFIHLSQNRPDLVNQWKVRRQDGAVRSSSESDMSI 362
           N  T+SEL  FADRFGA+RLNEAC KFI L Q RP+L++ W+V +++ A+RSS ESDMSI
Sbjct: 160 NPITVSELSQFADRFGANRLNEACTKFITLCQRRPELMSSWRVNQEEEAIRSSWESDMSI 219

Query: 363 DDPNEENFSVRSNGFNQFQPQPEHQYQHQLRSDQQTSQDQDAGQYRPSMRQEPNSYVAAV 542
           DDP+E+    R    N+ Q   E+Q   + +S   TS  Q   + +P           + 
Sbjct: 220 DDPSED--PSRDLATNRNQQHREYQTGMEEQSATGTSYCQHESKLKPQ----------SS 267

Query: 543 HDSLKEPXXXXXXXXXXXGFNKKKDEEPLPESAP-ISQP---TRRLSVQDRINLFENXXX 710
           HD                  N +++E+   ++ P +SQP   TRRLSVQ+RI++FEN   
Sbjct: 268 HDE-----------------NDEEEEKSTVQNEPLVSQPRQLTRRLSVQERISMFEN--- 307

Query: 711 XXXXXXXXXXXXXXXXXLRRMSSDVSSAGQAAERAVLRRWSGASDMSMDLSNENLAVSTS 890
                            L+R+SSD+SS+    E+ V+RRWSGASDMS+DL N+     T 
Sbjct: 308 KQKENSGEKTAVAKSTELKRLSSDLSSSA-GMEKVVVRRWSGASDMSIDLGNDR-KDDTG 365

Query: 891 CSTMNSVSKSSV 926
            S + + S SSV
Sbjct: 366 DSPLCTPSSSSV 377


>ref|NP_001118623.1| uncharacterized protein [Arabidopsis thaliana]
           gi|332641960|gb|AEE75481.1| uncharacterized protein
           [Arabidopsis thaliana]
          Length = 1270

 Score =  207 bits (528), Expect = 3e-51
 Identities = 137/312 (43%), Positives = 185/312 (59%), Gaps = 4/312 (1%)
 Frame = +3

Query: 3   RIYLQGAGNQISSAKGGDGIGASTSADITKKELLRAIDVRLVAVRQDLTTACARASSAGF 182
           +IY +G  +Q SSAK  D    + +AD+TKKELL+AID+RL AVRQDL TAC RAS+AGF
Sbjct: 110 KIYGEGTSDQRSSAK--DSTDTTPAADVTKKELLKAIDLRLAAVRQDLATACNRASAAGF 167

Query: 183 NIDTISELQSFADRFGAHRLNEACAKFIHLSQNRPDLVNQWKVRRQDGAVRSSSESDMSI 362
           N  T+SEL  FADRFGA+RLNEAC KFI L Q RP+L++ W+V +++ A+RSS ESDMSI
Sbjct: 168 NPITVSELSQFADRFGANRLNEACTKFITLCQRRPELMSSWRVNQEEEAIRSSWESDMSI 227

Query: 363 DDPNEENFSVRSNGFNQFQPQPEHQYQHQLRSDQQTSQDQDAGQYRPSMRQEPNSYVAAV 542
           DDP+E+    R    N+ Q   E+Q   + +S   TS  Q   + +P           + 
Sbjct: 228 DDPSED--PSRDLATNRNQQHREYQTGMEEQSATGTSYCQHESKLKPQ----------SS 275

Query: 543 HDSLKEPXXXXXXXXXXXGFNKKKDEEPLPESAP-ISQP---TRRLSVQDRINLFENXXX 710
           HD                  N +++E+   ++ P +SQP   TRRLSVQ+RI++FEN   
Sbjct: 276 HDE-----------------NDEEEEKSTVQNEPLVSQPRQLTRRLSVQERISMFEN--- 315

Query: 711 XXXXXXXXXXXXXXXXXLRRMSSDVSSAGQAAERAVLRRWSGASDMSMDLSNENLAVSTS 890
                            L+R+SSD+SS+    E+ V+RRWSGASDMS+DL N+     T 
Sbjct: 316 KQKENSGEKTAVAKSTELKRLSSDLSSSA-GMEKVVVRRWSGASDMSIDLGNDR-KDDTG 373

Query: 891 CSTMNSVSKSSV 926
            S + + S SSV
Sbjct: 374 DSPLCTPSSSSV 385


>ref|XP_002885016.1| hypothetical protein ARALYDRAFT_478831 [Arabidopsis lyrata subsp.
           lyrata] gi|297330856|gb|EFH61275.1| hypothetical protein
           ARALYDRAFT_478831 [Arabidopsis lyrata subsp. lyrata]
          Length = 1256

 Score =  203 bits (517), Expect = 5e-50
 Identities = 132/312 (42%), Positives = 182/312 (58%), Gaps = 4/312 (1%)
 Frame = +3

Query: 3   RIYLQGAGNQISSAKGGDGIGASTSADITKKELLRAIDVRLVAVRQDLTTACARASSAGF 182
           +IY +G G+Q SSAK  DG   + +AD+TKKELL+AID+RL AVRQDL TAC RAS+AGF
Sbjct: 110 KIYGEGTGDQRSSAK--DGTETTPAADVTKKELLKAIDLRLAAVRQDLATACNRASAAGF 167

Query: 183 NIDTISELQSFADRFGAHRLNEACAKFIHLSQNRPDLVNQWKVRRQDGAVRSSSESDMSI 362
           N  T+SEL  FADRFGA+RLNEAC KFI L Q RP+L++ W+V +++ A+R S ESDMSI
Sbjct: 168 NPITVSELSQFADRFGANRLNEACTKFITLCQKRPELMSSWRVNQEEEAIRLSWESDMSI 227

Query: 363 DDPNEENFSVRSNGFNQFQPQPEHQYQHQLRSDQQTSQDQDAGQYRPSMRQEPNSYVAAV 542
           DDP+E+                          D  T+++Q   +Y+  M ++  +     
Sbjct: 228 DDPSEDP-----------------------SRDLATNRNQQHREYQTGMEEQSATGTNYC 264

Query: 543 HDSLKEPXXXXXXXXXXXGFNKKKDEEPLPESAP-ISQP---TRRLSVQDRINLFENXXX 710
              LK+                +++E+   ++ P +SQP   TRRLSVQ+RI++FEN   
Sbjct: 265 QQELKD----------------EEEEKSTVQNEPLVSQPRQLTRRLSVQERISMFENKQK 308

Query: 711 XXXXXXXXXXXXXXXXXLRRMSSDVSSAGQAAERAVLRRWSGASDMSMDLSNENLAVSTS 890
                            L+R+SSD+SS+    E+ V+RRWSGASDMS+DL N+     T 
Sbjct: 309 ENSGEKTAVAKSTE---LKRLSSDLSSSA-GMEKVVVRRWSGASDMSIDLGNDR-KDDTG 363

Query: 891 CSTMNSVSKSSV 926
            S + + S SSV
Sbjct: 364 DSPLCTPSASSV 375


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