BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00004420
         (1228 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ABJ99590.1| type III chlorophyll a/b-binding protein [Lycoris...   441   e-121
gb|ABJ99591.1| type III chlorophyll a/b-binding protein [Lycoris...   441   e-121
ref|XP_002273201.1| PREDICTED: chlorophyll a-b binding protein 8...   439   e-121
ref|XP_004139075.1| PREDICTED: chlorophyll a-b binding protein 8...   436   e-120
ref|XP_002524566.1| chlorophyll A/B binding protein, putative [R...   436   e-120

>gb|ABJ99590.1| type III chlorophyll a/b-binding protein [Lycoris aurea]
          Length = 275

 Score =  441 bits (1135), Expect = e-121
 Identities = 217/261 (83%), Positives = 228/261 (87%), Gaps = 6/261 (2%)
 Frame = +2

Query: 248  RQVFGGRVVVPT------SIRKSSFFVKAAATPPVKQGADRPLWFASKQSLSYLNGSLPG 409
            RQ+ GGR V  T      S RK+SF VKAA+TPPVKQGADR LWFASKQSLSYL+GSLPG
Sbjct: 15   RQLLGGRPVQWTPSRSFSSSRKASFVVKAASTPPVKQGADRQLWFASKQSLSYLDGSLPG 74

Query: 410  DYGFDPLGLSDPEGTGGFIEPNWLAYGEVINGRYAMLGAVGAIAPEIFGKLGLIPAETAL 589
            D+GFDPLGLSDPEGTGGFIEP WLAYGE+INGRYAMLG  GAIAPEI GKLGLIP ETAL
Sbjct: 75   DFGFDPLGLSDPEGTGGFIEPKWLAYGEIINGRYAMLGVAGAIAPEILGKLGLIPPETAL 134

Query: 590  PWFQTGVIPPAGTYNYWADPYTLFVFEMALMGFAEHRRFQDWAKPGSMGKQYFLGFEKYL 769
            PWFQTGVIPPAGTY+YWADPYTLFV EMALMGFAEHRRFQDWAKPGSMGKQYFLGFEK+L
Sbjct: 135  PWFQTGVIPPAGTYSYWADPYTLFVLEMALMGFAEHRRFQDWAKPGSMGKQYFLGFEKFL 194

Query: 770  GGSGNPIYXXXXXXXXXXXXKDEKSLNELKLKEVKNGRLAMLAILGYFIQGLVTGVGPFQ 949
            GGSG+P Y            KDEKS+ ELKLKEVKNGRLAMLAILG+FIQGLVTGVGPFQ
Sbjct: 195  GGSGDPAYPGGPIFNPLGFGKDEKSMKELKLKEVKNGRLAMLAILGFFIQGLVTGVGPFQ 254

Query: 950  NLLDHLADPVNNNVLTSLKFH 1012
            NLLDHLADPVNNNVLTSLKFH
Sbjct: 255  NLLDHLADPVNNNVLTSLKFH 275


>gb|ABJ99591.1| type III chlorophyll a/b-binding protein [Lycoris aurea]
          Length = 275

 Score =  441 bits (1134), Expect = e-121
 Identities = 217/261 (83%), Positives = 229/261 (87%), Gaps = 6/261 (2%)
 Frame = +2

Query: 248  RQVFGGRVV--VPT----SIRKSSFFVKAAATPPVKQGADRPLWFASKQSLSYLNGSLPG 409
            RQ+ GGR V   PT    S RK+SF VKAA+TPPVKQGADR LWFASKQSLSYL+GSLPG
Sbjct: 15   RQLLGGRPVQWTPTRSFSSSRKASFVVKAASTPPVKQGADRQLWFASKQSLSYLDGSLPG 74

Query: 410  DYGFDPLGLSDPEGTGGFIEPNWLAYGEVINGRYAMLGAVGAIAPEIFGKLGLIPAETAL 589
            D+GFDPLGLSDPEGTGGFIEP WLAYGE+INGRYAMLG  GAIAPEI GKLGLIP ETAL
Sbjct: 75   DFGFDPLGLSDPEGTGGFIEPKWLAYGEIINGRYAMLGVAGAIAPEILGKLGLIPPETAL 134

Query: 590  PWFQTGVIPPAGTYNYWADPYTLFVFEMALMGFAEHRRFQDWAKPGSMGKQYFLGFEKYL 769
            PWFQTGVIPPAGTY+YWADPYTLFV EMALMGFAEHRRFQDWAKPGSMGKQYFLGFEK+L
Sbjct: 135  PWFQTGVIPPAGTYSYWADPYTLFVLEMALMGFAEHRRFQDWAKPGSMGKQYFLGFEKFL 194

Query: 770  GGSGNPIYXXXXXXXXXXXXKDEKSLNELKLKEVKNGRLAMLAILGYFIQGLVTGVGPFQ 949
            GGSG+P Y            KDE+S+ ELKLKEVKNGRLAMLAILG+FIQGLVTGVGPFQ
Sbjct: 195  GGSGDPAYPGGPIFNPLGFGKDERSMKELKLKEVKNGRLAMLAILGFFIQGLVTGVGPFQ 254

Query: 950  NLLDHLADPVNNNVLTSLKFH 1012
            NLLDHLADPVNNNVLTSLKFH
Sbjct: 255  NLLDHLADPVNNNVLTSLKFH 275


>ref|XP_002273201.1| PREDICTED: chlorophyll a-b binding protein 8, chloroplastic [Vitis
            vinifera]
          Length = 274

 Score =  439 bits (1129), Expect = e-121
 Identities = 211/255 (82%), Positives = 223/255 (87%)
 Frame = +2

Query: 248  RQVFGGRVVVPTSIRKSSFFVKAAATPPVKQGADRPLWFASKQSLSYLNGSLPGDYGFDP 427
            RQ+ G R +   S + SSF V+AA+TPPVKQGADRPLWFASKQSL+YL+GSLPGDYGFDP
Sbjct: 19   RQILGSRPLQSPSRKSSSFVVRAASTPPVKQGADRPLWFASKQSLTYLDGSLPGDYGFDP 78

Query: 428  LGLSDPEGTGGFIEPNWLAYGEVINGRYAMLGAVGAIAPEIFGKLGLIPAETALPWFQTG 607
            LGLSDPEGTGGFIEP WLAYGEVINGRYAMLGAVGAIAPEI GKLGLIP ETALPWF+TG
Sbjct: 79   LGLSDPEGTGGFIEPRWLAYGEVINGRYAMLGAVGAIAPEILGKLGLIPPETALPWFKTG 138

Query: 608  VIPPAGTYNYWADPYTLFVFEMALMGFAEHRRFQDWAKPGSMGKQYFLGFEKYLGGSGNP 787
            V PPAGTYNYWADPYTLFVFEMALMGFAEHRRFQDWA PGSMGKQYFLG EKYLGGSG+P
Sbjct: 139  VFPPAGTYNYWADPYTLFVFEMALMGFAEHRRFQDWANPGSMGKQYFLGLEKYLGGSGDP 198

Query: 788  IYXXXXXXXXXXXXKDEKSLNELKLKEVKNGRLAMLAILGYFIQGLVTGVGPFQNLLDHL 967
             Y            KDEKSL +LKLKEVKNGRLAMLAILGYF QG VTGVGP QNLLDHL
Sbjct: 199  AYPGGPLFNPLGFGKDEKSLKDLKLKEVKNGRLAMLAILGYFAQGPVTGVGPLQNLLDHL 258

Query: 968  ADPVNNNVLTSLKFH 1012
            ADPVNNN++TSLKFH
Sbjct: 259  ADPVNNNIITSLKFH 273


>ref|XP_004139075.1| PREDICTED: chlorophyll a-b binding protein 8, chloroplastic-like
            [Cucumis sativus] gi|449532766|ref|XP_004173351.1|
            PREDICTED: chlorophyll a-b binding protein 8,
            chloroplastic-like [Cucumis sativus]
          Length = 273

 Score =  436 bits (1121), Expect = e-120
 Identities = 210/255 (82%), Positives = 224/255 (87%)
 Frame = +2

Query: 248  RQVFGGRVVVPTSIRKSSFFVKAAATPPVKQGADRPLWFASKQSLSYLNGSLPGDYGFDP 427
            RQ  G R    +S + +SF V+A ATPPVKQGADR LWFASKQSLSYL+GSLPGD+GFDP
Sbjct: 19   RQRLGARPSFGSSRKSASFVVRAEATPPVKQGADRQLWFASKQSLSYLDGSLPGDFGFDP 78

Query: 428  LGLSDPEGTGGFIEPNWLAYGEVINGRYAMLGAVGAIAPEIFGKLGLIPAETALPWFQTG 607
            LGLSDPEGTGGFIEP WLAYGEVINGR+AMLGA GAIAPEIFG LGLIP ETALPWF+TG
Sbjct: 79   LGLSDPEGTGGFIEPRWLAYGEVINGRFAMLGAAGAIAPEIFGSLGLIPPETALPWFKTG 138

Query: 608  VIPPAGTYNYWADPYTLFVFEMALMGFAEHRRFQDWAKPGSMGKQYFLGFEKYLGGSGNP 787
            VIPPAGTYNYWADPYTLFVFEMALMGFAEHRRFQDWAKPGSMGKQYFLG EK+LGGSG+P
Sbjct: 139  VIPPAGTYNYWADPYTLFVFEMALMGFAEHRRFQDWAKPGSMGKQYFLGLEKFLGGSGDP 198

Query: 788  IYXXXXXXXXXXXXKDEKSLNELKLKEVKNGRLAMLAILGYFIQGLVTGVGPFQNLLDHL 967
             Y            KDEKS+ ELKLKE+KNGRLAMLAILGYFIQGLVTGVGP+QNLLDHL
Sbjct: 199  AYPGGPLFNPLGFGKDEKSMKELKLKEIKNGRLAMLAILGYFIQGLVTGVGPYQNLLDHL 258

Query: 968  ADPVNNNVLTSLKFH 1012
            +DPVNNNVLTSLKFH
Sbjct: 259  SDPVNNNVLTSLKFH 273


>ref|XP_002524566.1| chlorophyll A/B binding protein, putative [Ricinus communis]
            gi|223536119|gb|EEF37774.1| chlorophyll A/B binding
            protein, putative [Ricinus communis]
          Length = 273

 Score =  436 bits (1121), Expect = e-120
 Identities = 208/255 (81%), Positives = 225/255 (88%)
 Frame = +2

Query: 248  RQVFGGRVVVPTSIRKSSFFVKAAATPPVKQGADRPLWFASKQSLSYLNGSLPGDYGFDP 427
            RQ+ G R    +S + SSF V+A++TPPVKQGADR LWFASKQSL+YL+GSLPGD+GFDP
Sbjct: 19   RQILGARSSFGSSRKSSSFVVRASSTPPVKQGADRQLWFASKQSLTYLDGSLPGDFGFDP 78

Query: 428  LGLSDPEGTGGFIEPNWLAYGEVINGRYAMLGAVGAIAPEIFGKLGLIPAETALPWFQTG 607
            LGLSDPEGTGGFIEP WLAYGE+INGR+AMLGA GAIAPEI GK GLIP ETALPWFQTG
Sbjct: 79   LGLSDPEGTGGFIEPKWLAYGEIINGRFAMLGAAGAIAPEILGKAGLIPPETALPWFQTG 138

Query: 608  VIPPAGTYNYWADPYTLFVFEMALMGFAEHRRFQDWAKPGSMGKQYFLGFEKYLGGSGNP 787
            VIPPAGTY+YWADPYTLFVFEMALMGFAEHRRFQDWAKPGSMGKQYFLG EK+LGGSG+P
Sbjct: 139  VIPPAGTYDYWADPYTLFVFEMALMGFAEHRRFQDWAKPGSMGKQYFLGLEKFLGGSGDP 198

Query: 788  IYXXXXXXXXXXXXKDEKSLNELKLKEVKNGRLAMLAILGYFIQGLVTGVGPFQNLLDHL 967
             Y            KDEKS+ ELKLKEVKNGRLAMLAILGYF+QGLVTGVGP+QNLLDHL
Sbjct: 199  AYPGGPLFNPLGFGKDEKSMKELKLKEVKNGRLAMLAILGYFVQGLVTGVGPYQNLLDHL 258

Query: 968  ADPVNNNVLTSLKFH 1012
            ADPVNNNVLTSLKFH
Sbjct: 259  ADPVNNNVLTSLKFH 273