BLASTX nr result

ID: Coptis23_contig00004419 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00004419
         (1171 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003634984.1| PREDICTED: uncharacterized protein LOC100852...   301   3e-79
ref|XP_002270450.2| PREDICTED: protein FAR1-RELATED SEQUENCE 3-l...   294   3e-77
emb|CAN81121.1| hypothetical protein VITISV_030391 [Vitis vinifera]   216   1e-53
ref|XP_002527271.1| conserved hypothetical protein [Ricinus comm...   204   3e-50
emb|CBI38280.3| unnamed protein product [Vitis vinifera]              202   2e-49

>ref|XP_003634984.1| PREDICTED: uncharacterized protein LOC100852466 [Vitis vinifera]
          Length = 664

 Score =  301 bits (770), Expect = 3e-79
 Identities = 143/189 (75%), Positives = 168/189 (88%), Gaps = 1/189 (0%)
 Frame = -3

Query: 893  DGSEDPCVGMQFESEQSAMVYYDAYAKRVGFIIRVGNCHRSGRDNSIISRRFLCNKEGFR 714
            DG+ DP VGM+FESE++AMVYYDAYAKRVGFIIRVGNCHRSGRD S+ISRRFLCNKEGFR
Sbjct: 471  DGTVDPYVGMEFESEEAAMVYYDAYAKRVGFIIRVGNCHRSGRDGSVISRRFLCNKEGFR 530

Query: 713  LANNKTKRNENRKPRDTTREGCKAMIMVRKERSGRWVISKLEKEHTHPLGLPASKGRRGS 534
            ++N K KR E RKPR+ TREGC+AMIMVRK++SG+W+++KLE EH HPLG+P  KGRRGS
Sbjct: 531  VSNKKMKRLEVRKPREITREGCRAMIMVRKDKSGKWIVTKLETEHCHPLGIPTGKGRRGS 590

Query: 533  VQ-ARPQDEKDKKIRELSLELHRANLRLAECREQLDTILNDAERHTDHLSKTVQDIVENV 357
            VQ  +  DEKDKKIRELS ELHRAN +LAECREQL+ +L D ERHT+HL+K+VQDIVENV
Sbjct: 591  VQLPKLMDEKDKKIRELSSELHRANQQLAECREQLEMVLKDIERHTNHLTKSVQDIVENV 650

Query: 356  KEIEAEDQE 330
            KE+EAED+E
Sbjct: 651  KEVEAEDEE 659


>ref|XP_002270450.2| PREDICTED: protein FAR1-RELATED SEQUENCE 3-like [Vitis vinifera]
          Length = 245

 Score =  294 bits (752), Expect = 3e-77
 Identities = 140/185 (75%), Positives = 164/185 (88%), Gaps = 1/185 (0%)
 Frame = -3

Query: 893 DGSEDPCVGMQFESEQSAMVYYDAYAKRVGFIIRVGNCHRSGRDNSIISRRFLCNKEGFR 714
           DG+ DP VGM+FESE++AMVYYDAYAKRVGFIIRVGNCHRSGRD S+ISRRFLCNKEGFR
Sbjct: 47  DGTVDPYVGMEFESEEAAMVYYDAYAKRVGFIIRVGNCHRSGRDGSVISRRFLCNKEGFR 106

Query: 713 LANNKTKRNENRKPRDTTREGCKAMIMVRKERSGRWVISKLEKEHTHPLGLPASKGRRGS 534
           ++N K KR E RKPR+ TREGC+AMIMVRK++SG+W+++KLE EH HPLG+P  KGRRGS
Sbjct: 107 VSNKKMKRLEVRKPREITREGCRAMIMVRKDKSGKWIVTKLETEHCHPLGIPTGKGRRGS 166

Query: 533 VQ-ARPQDEKDKKIRELSLELHRANLRLAECREQLDTILNDAERHTDHLSKTVQDIVENV 357
           VQ  +  DEKDKKIRELS ELHRAN +LAECREQL+ +L D ERHT+HL+K+VQDIVENV
Sbjct: 167 VQLPKLMDEKDKKIRELSSELHRANQQLAECREQLEMVLKDIERHTNHLTKSVQDIVENV 226

Query: 356 KEIEA 342
           KE+EA
Sbjct: 227 KEVEA 231


>emb|CAN81121.1| hypothetical protein VITISV_030391 [Vitis vinifera]
          Length = 542

 Score =  216 bits (549), Expect = 1e-53
 Identities = 99/132 (75%), Positives = 116/132 (87%)
 Frame = -3

Query: 893 DGSEDPCVGMQFESEQSAMVYYDAYAKRVGFIIRVGNCHRSGRDNSIISRRFLCNKEGFR 714
           DG+ DP VGM+FESE++AMVYYDAYAKRVGFIIRVGNCHRSGRD S+ISRRFLCNKEGFR
Sbjct: 47  DGTVDPYVGMEFESEEAAMVYYDAYAKRVGFIIRVGNCHRSGRDGSVISRRFLCNKEGFR 106

Query: 713 LANNKTKRNENRKPRDTTREGCKAMIMVRKERSGRWVISKLEKEHTHPLGLPASKGRRGS 534
           ++N K KR E RKPR+ TREGC+AMIMVRK++SG+W+++KLE EH HPLG+P  KGRRGS
Sbjct: 107 VSNKKMKRLEVRKPREITREGCRAMIMVRKDKSGKWIVTKLETEHCHPLGIPTGKGRRGS 166

Query: 533 VQARPQDEKDKK 498
           VQARPQ    +K
Sbjct: 167 VQARPQGRGRRK 178



 Score =  103 bits (258), Expect = 6e-20
 Identities = 49/62 (79%), Positives = 57/62 (91%)
 Frame = -3

Query: 515 DEKDKKIRELSLELHRANLRLAECREQLDTILNDAERHTDHLSKTVQDIVENVKEIEAED 336
           DEKDKKIRELS ELHRAN +LAECREQL+ +L D ERHT+HL+K+VQDIVENVKE+EAED
Sbjct: 289 DEKDKKIRELSSELHRANQQLAECREQLEMVLKDIERHTNHLTKSVQDIVENVKEVEAED 348

Query: 335 QE 330
           +E
Sbjct: 349 EE 350


>ref|XP_002527271.1| conserved hypothetical protein [Ricinus communis]
           gi|223533364|gb|EEF35115.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 209

 Score =  204 bits (520), Expect = 3e-50
 Identities = 103/196 (52%), Positives = 142/196 (72%), Gaps = 2/196 (1%)
 Frame = -3

Query: 920 SNEMELTGHDGSED--PCVGMQFESEQSAMVYYDAYAKRVGFIIRVGNCHRSGRDNSIIS 747
           SN  E+T  + S D  P VGM+FESE++A V+YDAYA R+GFI+RV    RS RD  ++ 
Sbjct: 15  SNGKEVTTAEESSDMEPYVGMEFESEEAAKVFYDAYATRLGFIMRVDAFRRSMRDGKVVW 74

Query: 746 RRFLCNKEGFRLANNKTKRNENRKPRDTTREGCKAMIMVRKERSGRWVISKLEKEHTHPL 567
           RR +CNKEGFR    + +R+ENRKPR  TREGCKAMI+V+KE++G+WV+++  KEH HPL
Sbjct: 75  RRLVCNKEGFRKL--RPRRSENRKPRAITREGCKAMIVVKKEKTGKWVVTRFVKEHNHPL 132

Query: 566 GLPASKGRRGSVQARPQDEKDKKIRELSLELHRANLRLAECREQLDTILNDAERHTDHLS 387
               S GRR  + ++  DEKD KIREL+ EL R   R A  +EQL T+L D E H++HLS
Sbjct: 133 VAIPSNGRRSVLLSQTPDEKDVKIRELTAELQRERKRSAAYQEQLYTVLRDMEEHSNHLS 192

Query: 386 KTVQDIVENVKEIEAE 339
           + ++D+V++V+EIE++
Sbjct: 193 RNIEDVVQSVREIESK 208


>emb|CBI38280.3| unnamed protein product [Vitis vinifera]
          Length = 305

 Score =  202 bits (513), Expect = 2e-49
 Identities = 101/211 (47%), Positives = 145/211 (68%), Gaps = 2/211 (0%)
 Frame = -3

Query: 965 EKDIIEHENGAMATISNEMELTGHDGSED--PCVGMQFESEQSAMVYYDAYAKRVGFIIR 792
           ++ + + E+G M   SN  EL  H+G+ +  P VGM+FESE++A V+YD YA  +GFI+R
Sbjct: 33  DEHLSDGEDGEMIESSNGKELVAHEGNSEMEPHVGMEFESEEAAKVFYDTYATHLGFIMR 92

Query: 791 VGNCHRSGRDNSIISRRFLCNKEGFRLANNKTKRNENRKPRDTTREGCKAMIMVRKERSG 612
           V    RS RD  ++ RR +CNKEGFR    + +R+ENRKPR  TREGCKAMI+V+KE++G
Sbjct: 93  VDAFRRSMRDGKVVWRRLVCNKEGFRKL--RPRRSENRKPRAITREGCKAMIVVKKEKTG 150

Query: 611 RWVISKLEKEHTHPLGLPASKGRRGSVQARPQDEKDKKIRELSLELHRANLRLAECREQL 432
           +WV+++  KEH H L    +  RR  + ++  DEKD KIREL+ EL R   R A  +EQL
Sbjct: 151 KWVVTRFVKEHNHQLVATPANSRRTVLLSQTPDEKDIKIRELTAELQRERKRCAAFQEQL 210

Query: 431 DTILNDAERHTDHLSKTVQDIVENVKEIEAE 339
           D +L D E H++HLS+ +  IV++V+EIE++
Sbjct: 211 DMVLRDMEEHSNHLSRNIDGIVQSVREIESK 241


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