BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00004411
         (2335 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002266334.1| PREDICTED: E3 ubiquitin protein ligase RIN2 ...   787   0.0  
ref|XP_002510949.1| protein binding protein, putative [Ricinus c...   769   0.0  
ref|XP_003522880.1| PREDICTED: E3 ubiquitin protein ligase RIN2-...   741   0.0  
ref|XP_004140081.1| PREDICTED: E3 ubiquitin protein ligase RIN2-...   736   0.0  
ref|XP_002303501.1| predicted protein [Populus trichocarpa] gi|2...   734   0.0  

>ref|XP_002266334.1| PREDICTED: E3 ubiquitin protein ligase RIN2 [Vitis vinifera]
            gi|296084203|emb|CBI24591.3| unnamed protein product
            [Vitis vinifera]
          Length = 587

 Score =  787 bits (2032), Expect = 0.0
 Identities = 394/588 (67%), Positives = 449/588 (76%), Gaps = 1/588 (0%)
 Frame = +3

Query: 99   MGLYLLPISALCTVASLVGLQLWTVVSLEKFNLDGSIAENVIHSGNASHVLDLLLGSHVT 278
            MG   L +SA CTV S VGLQ WT  SL +   DG I++N IHSGNAS VLDLLL SH T
Sbjct: 1    MGASYLLVSAACTVFSFVGLQWWTEQSLHRLKSDGLISDNYIHSGNASRVLDLLLSSHAT 60

Query: 279  IALLANFVLNVFIFLILCLKAIFFVKLNQTESRKVLERLINYLVYKGAFLPLILPPTIFQ 458
            IALL NF LN+F+ LILCLK IFF +L  +E+RK++ RLINY++YKG FLPL++P TIFQ
Sbjct: 61   IALLVNFALNIFVLLILCLKTIFFAELYPSETRKLVGRLINYVIYKGTFLPLVVPSTIFQ 120

Query: 459  AVTWTSWLTVLCTLKMFQALARDRLERLNASPSATPWTYFRXXXXXXXXXXXXXXWIRIC 638
            A  W+ WLT+LC+LKMFQALARDRLERLNASPSATPWTYFR              WI +C
Sbjct: 121  AGLWSMWLTILCSLKMFQALARDRLERLNASPSATPWTYFRVFSVLLLVLSVDLFWIWLC 180

Query: 639  MLIYRSLGSTMFLLLFFEPLSIAFETLQAIMVHGFQLLDMWLRHSAESNTSCERSHLFDK 818
            ++IYR+L S MFLLLFFEP SIAFETLQAI+VHGFQL+D+WL  S  ++ +C  S +F  
Sbjct: 181  LVIYRTLSSPMFLLLFFEPWSIAFETLQAIVVHGFQLIDIWLHDSEGNSINCRGSKIFHI 240

Query: 819  LAAGSLWEWKGTLIRNVGFFLDIMTLLMALCHHFNVWWLHGMAFHLVDAVIFLNIRALGS 998
               GSL EWKG LIRN+GF LD+ TLLMAL H+ ++WWLHGMAFHLVDA++FLNIRAL S
Sbjct: 241  SPVGSLLEWKGILIRNLGFLLDMATLLMALGHYLHIWWLHGMAFHLVDAILFLNIRALLS 300

Query: 999  AIIKRVRGFIKLTRALRTLHGALPDATSEELEAYDDECAICREPMAKAKKLSCNHLFHLA 1178
            AI+KRV+GFIKL  AL TLH ALPDATSEEL+AYDDECAICREPMAKAKKL CNHLFHLA
Sbjct: 301  AIVKRVKGFIKLRMALGTLHAALPDATSEELQAYDDECAICREPMAKAKKLHCNHLFHLA 360

Query: 1179 CLRSWLDQGLSEIYSCPTCRRPLFAS-SESSPLPHPGEVLTDDQLAHQMGSGLDRTLSPG 1355
            CLRSWLDQGL+EIYSCPTCR+PLF   S     P  GEV +D+QLA Q+ SGLDR     
Sbjct: 361  CLRSWLDQGLTEIYSCPTCRKPLFTGRSRDDANPRTGEVSSDEQLARQISSGLDRPGPAA 420

Query: 1356 QGLPVGAFPDQIQTPSESMPWRGAGLDSRWTHPWTSQGLDGAGPSNAITSVGLGRVQMMM 1535
              LP G FP+Q     E   WR AGLD  W H W +QGLDGAGPS AI SVGLGRVQMMM
Sbjct: 421  HALPAGVFPNQTHDALEISAWREAGLDPSWLHTWPNQGLDGAGPSTAIRSVGLGRVQMMM 480

Query: 1536 RHLASVGETYAQTAFEDTAWSLWPMTHXXXXXXXXXXXXAATALRFTGRNGGLRFRNAPP 1715
            RHLASVGETYAQTA ED AWSLWPM              AA A+R+ G NGGL  R A  
Sbjct: 481  RHLASVGETYAQTALEDAAWSLWPMNPSQAAASGLPIPPAA-AVRYPGGNGGLHMRTASR 539

Query: 1716 SVNDNISNILSMADTVREVLPNIPDEIIFQELQRTNSVTVTVNNLLQM 1859
            S NDN++NIL+MA+TVREVLP+IPDEIIFQ+LQ+TNS TVTVNNLLQM
Sbjct: 540  SANDNLANILAMAETVREVLPHIPDEIIFQDLQQTNSATVTVNNLLQM 587


>ref|XP_002510949.1| protein binding protein, putative [Ricinus communis]
            gi|223550064|gb|EEF51551.1| protein binding protein,
            putative [Ricinus communis]
          Length = 585

 Score =  769 bits (1985), Expect = 0.0
 Identities = 382/588 (64%), Positives = 453/588 (77%), Gaps = 1/588 (0%)
 Frame = +3

Query: 99   MGLYLLPISALCTVASLVGLQLWTVVSLEKFNLDGSIAENVIHSGNASHVLDLLLGSHVT 278
            MG   L ISA CT  S VGL+ WT +SLEK   +G I+EN I+  NA+  L+LLLGS+ T
Sbjct: 1    MGAGYLAISAACTALSFVGLKCWTELSLEKLKSEGLISENFINPENANRALELLLGSYAT 60

Query: 279  IALLANFVLNVFIFLILCLKAIFFVKLNQTESRKVLERLINYLVYKGAFLPLILPPTIFQ 458
            IALLA+FV N FI L L LK IFF +L  +E+RK++ERL+NY++YKG FLPL++P TIFQ
Sbjct: 61   IALLASFVFNAFILLNLSLKTIFFAELYPSETRKLMERLVNYVIYKGTFLPLVIPATIFQ 120

Query: 459  AVTWTSWLTVLCTLKMFQALARDRLERLNASPSATPWTYFRXXXXXXXXXXXXXXWIRIC 638
            A  W+SWLTVLC+LKMFQALARDRLERLNASPSA PWTYFR              WIR+C
Sbjct: 121  AGLWSSWLTVLCSLKMFQALARDRLERLNASPSAMPWTYFRVYSVLLLVLSVDFFWIRLC 180

Query: 639  MLIYRSLGSTMFLLLFFEPLSIAFETLQAIMVHGFQLLDMWLRHSAESNTSCERSHLFDK 818
             LIYR+L ++MF+LLF+EP SIAFET+QA++VHGFQLLD+W  HSA ++ +C+R   FD 
Sbjct: 181  WLIYRTLDTSMFMLLFYEPFSIAFETMQAMLVHGFQLLDIWFHHSAGNDANCQRFKFFDP 240

Query: 819  LAAGSLWEWKGTLIRNVGFFLDIMTLLMALCHHFNVWWLHGMAFHLVDAVIFLNIRALGS 998
            +AAGSL EWKG LIRN+GF LD+ TLLMAL H+ ++WWLHG+AFHLVDAV+FLNIRAL S
Sbjct: 241  IAAGSLSEWKGILIRNLGFSLDMATLLMALGHYMHIWWLHGVAFHLVDAVLFLNIRALLS 300

Query: 999  AIIKRVRGFIKLTRALRTLHGALPDATSEELEAYDDECAICREPMAKAKKLSCNHLFHLA 1178
            AIIKRVRGF+KL  AL  LH ALPDATSEEL AYDDECAICREPMAKAKKL C+HLFHLA
Sbjct: 301  AIIKRVRGFVKLRIALGALHAALPDATSEELRAYDDECAICREPMAKAKKLHCSHLFHLA 360

Query: 1179 CLRSWLDQGLSEIYSCPTCRRPLFAS-SESSPLPHPGEVLTDDQLAHQMGSGLDRTLSPG 1355
            CLRSWLDQGL+E+YSCPTCR+PLF    ++ P  H  +V  D+QLA Q+  GLD+  +P 
Sbjct: 361  CLRSWLDQGLNEMYSCPTCRKPLFVGRPDNEPSRHRRDVSADEQLARQISEGLDQQNAP- 419

Query: 1356 QGLPVGAFPDQIQTPSESMPWRGAGLDSRWTHPWTSQGLDGAGPSNAITSVGLGRVQMMM 1535
              LP G FP+Q++   E  PWR AGLDS W H W  QG+DGAGPS A+ SVGLGRVQMMM
Sbjct: 420  -TLPAGVFPNQMRNSIEGSPWRSAGLDSSWLHTWQGQGVDGAGPSTAMRSVGLGRVQMMM 478

Query: 1536 RHLASVGETYAQTAFEDTAWSLWPMTHXXXXXXXXXXXXAATALRFTGRNGGLRFRNAPP 1715
            RHLASVGETYAQTA ED+AWSLWPM +             AT  R  G  GGL  R+   
Sbjct: 479  RHLASVGETYAQTALEDSAWSLWPM-NPPQGVASGSLVPPATGGRSAGGTGGLHMRSPSR 537

Query: 1716 SVNDNISNILSMADTVREVLPNIPDEIIFQELQRTNSVTVTVNNLLQM 1859
            S NDN++N+L+MA+TVREVLP+IPDE+I Q+LQRTNSVTVTVNNLLQM
Sbjct: 538  SANDNVANLLAMAETVREVLPHIPDELILQDLQRTNSVTVTVNNLLQM 585


>ref|XP_003522880.1| PREDICTED: E3 ubiquitin protein ligase RIN2-like [Glycine max]
          Length = 586

 Score =  741 bits (1914), Expect = 0.0
 Identities = 370/588 (62%), Positives = 444/588 (75%), Gaps = 1/588 (0%)
 Frame = +3

Query: 99   MGLYLLPISALCTVASLVGLQLWTVVSLEKFNLDGSIAENVIHSGNASHVLDLLLGSHVT 278
            M L ++ IS + TV S VGLQ  T +SL+K   DG +  N+IH  NAS  ++L LG + T
Sbjct: 1    MALRVIAISVVSTVLSFVGLQFCTDLSLDKLTSDGLVGWNLIHLDNASQDIELPLGLYTT 60

Query: 279  IALLANFVLNVFIFLILCLKAIFFVKLNQTESRKVLERLINYLVYKGAFLPLILPPTIFQ 458
            I LL N ++NVFI L LCLKA+FF +L  +E+RK++ERLINY++YKG FLPLI+PPTI+Q
Sbjct: 61   IGLLVNCMINVFILLNLCLKAVFFTELYASETRKLVERLINYVIYKGMFLPLIVPPTIYQ 120

Query: 459  AVTWTSWLTVLCTLKMFQALARDRLERLNASPSATPWTYFRXXXXXXXXXXXXXXWIRIC 638
            A  W++WLTVLC+LKMFQALARDRLERLNASP+ATPWTY R              WIR C
Sbjct: 121  AGLWSTWLTVLCSLKMFQALARDRLERLNASPAATPWTYLRVYSALLFVFMVDVLWIRFC 180

Query: 639  MLIYRSLGSTMFLLLFFEPLSIAFETLQAIMVHGFQLLDMWLRHSAESNTSCERSHLFDK 818
            + IYR+ GS+M+LLLFFEP SI FETLQAI++HGFQLLD+WL HSA ++       L D 
Sbjct: 181  LTIYRTHGSSMYLLLFFEPFSIVFETLQAILIHGFQLLDIWLHHSACNSNDFRTPKLLDM 240

Query: 819  LAAGSLWEWKGTLIRNVGFFLDIMTLLMALCHHFNVWWLHGMAFHLVDAVIFLNIRALGS 998
            L AGSL E KG LIRN+GFFLD+ T  MAL H+  +WWLHGMAFHLVDA IFLNIRAL S
Sbjct: 241  LTAGSLLELKGILIRNLGFFLDMATFFMALGHYLYIWWLHGMAFHLVDAFIFLNIRALLS 300

Query: 999  AIIKRVRGFIKLTRALRTLHGALPDATSEELEAYDDECAICREPMAKAKKLSCNHLFHLA 1178
            AII R++GFI+L  AL TLH ALPDAT+EEL AYDDECAICREPMAKAK+L+CNHLFHLA
Sbjct: 301  AIINRIKGFIRLRIALGTLHAALPDATTEELRAYDDECAICREPMAKAKRLNCNHLFHLA 360

Query: 1179 CLRSWLDQGLSEIYSCPTCRRPLFAS-SESSPLPHPGEVLTDDQLAHQMGSGLDRTLSPG 1355
            CLRSWLDQGL+E+Y+CPTCR+PLFA   E+      G + +D+QLA Q+ +GLDR  S  
Sbjct: 361  CLRSWLDQGLTEMYTCPTCRKPLFAGVPENQTNSDVGTISSDEQLARQISAGLDRPNSAR 420

Query: 1356 QGLPVGAFPDQIQTPSESMPWRGAGLDSRWTHPWTSQGLDGAGPSNAITSVGLGRVQMMM 1535
              +P G +P+Q     E +PWRGAGLDS W H W +QG+DGAGPS AI +VGLGRVQMMM
Sbjct: 421  HTMPAGLYPNQTLNTPEGVPWRGAGLDSGWWHSWPNQGVDGAGPSTAIRTVGLGRVQMMM 480

Query: 1536 RHLASVGETYAQTAFEDTAWSLWPMTHXXXXXXXXXXXXAATALRFTGRNGGLRFRNAPP 1715
            RHLASVGETYAQTAFEDTAW+LWP+              +    R   R G L  RNA  
Sbjct: 481  RHLASVGETYAQTAFEDTAWNLWPIN--PSQASASGSTISPPGGRLPERTGSLHLRNASQ 538

Query: 1716 SVNDNISNILSMADTVREVLPNIPDEIIFQELQRTNSVTVTVNNLLQM 1859
            S ND+++NIL+MA+TVREVLP+IPD++IFQ+LQRTNSVTVTVNNLLQM
Sbjct: 539  SANDDVANILAMAETVREVLPHIPDDMIFQDLQRTNSVTVTVNNLLQM 586


>ref|XP_004140081.1| PREDICTED: E3 ubiquitin protein ligase RIN2-like [Cucumis sativus]
          Length = 586

 Score =  736 bits (1901), Expect = 0.0
 Identities = 365/588 (62%), Positives = 441/588 (75%), Gaps = 1/588 (0%)
 Frame = +3

Query: 99   MGLYLLPISALCTVASLVGLQLWTVVSLEKFNLDGSIAENVIHSGNASHVLDLLLGSHVT 278
            MG+  + ISA CT  S +GLQLWT +S++    +  I EN   + NA+ V+DLLL S+VT
Sbjct: 1    MGVSYIAISAACTALSFIGLQLWTELSIDNLRSEKIIGENPFKTENAAPVIDLLLSSYVT 60

Query: 279  IALLANFVLNVFIFLILCLKAIFFVKLNQTESRKVLERLINYLVYKGAFLPLILPPTIFQ 458
            + LLANF LNVF+ LIL LK + FV+L  +ESRK++ERL+NY++YKG FLPL++PPT + 
Sbjct: 61   VGLLANFALNVFVLLILFLKTLIFVELYSSESRKMVERLVNYVIYKGTFLPLVVPPTKYH 120

Query: 459  AVTWTSWLTVLCTLKMFQALARDRLERLNASPSATPWTYFRXXXXXXXXXXXXXXWIRIC 638
               W+ WL VLC+LKMFQALARDRLERLNASPSAT WTYF                IR C
Sbjct: 121  IALWSIWLAVLCSLKMFQALARDRLERLNASPSATSWTYFCVYSVLLLVLIVDLSGIRFC 180

Query: 639  MLIYRSLGSTMFLLLFFEPLSIAFETLQAIMVHGFQLLDMWLRHSAESNTSCERSHLFDK 818
            ++IYR+LG ++FLLLFFEPLSIAFETLQAI+VHGFQLLD+WL HSA +NT+C+ S  F+ 
Sbjct: 181  LMIYRTLGLSLFLLLFFEPLSIAFETLQAILVHGFQLLDIWLHHSAGNNTNCQFSKFFNM 240

Query: 819  LAAGSLWEWKGTLIRNVGFFLDIMTLLMALCHHFNVWWLHGMAFHLVDAVIFLNIRALGS 998
               G LWE KGTLIRN+GFFLD+ TLLMAL H+  +W LHGM F+LVDAV+FLNIRAL S
Sbjct: 241  TIPGLLWELKGTLIRNLGFFLDMATLLMALGHYVYIWRLHGMTFNLVDAVLFLNIRALLS 300

Query: 999  AIIKRVRGFIKLTRALRTLHGALPDATSEELEAYDDECAICREPMAKAKKLSCNHLFHLA 1178
            AI+KR+RGF+KL +AL  L+ ALPDATSEEL+AYDDECAICREPMAKAKKL+CNHLFHLA
Sbjct: 301  AIVKRIRGFMKLRKALGALNAALPDATSEELQAYDDECAICREPMAKAKKLNCNHLFHLA 360

Query: 1179 CLRSWLDQGLSEIYSCPTCRRPLFASSESSPL-PHPGEVLTDDQLAHQMGSGLDRTLSPG 1355
            CLRSWLDQGL+E YSCPTCR+PLF   + + + P  GE  +D+QLA Q+ +GL+R  +  
Sbjct: 361  CLRSWLDQGLNEYYSCPTCRKPLFVGRQENDVNPRAGETFSDEQLARQISAGLNRQNATI 420

Query: 1356 QGLPVGAFPDQIQTPSESMPWRGAGLDSRWTHPWTSQGLDGAGPSNAITSVGLGRVQMMM 1535
              LP G FP+Q Q P E  PWR   LD  W H W SQ +DGAGPSNA  SVGL RVQMMM
Sbjct: 421  PTLPAGIFPNQTQNPVEGSPWRSTSLDPSWLHDWASQSMDGAGPSNAARSVGLSRVQMMM 480

Query: 1536 RHLASVGETYAQTAFEDTAWSLWPMTHXXXXXXXXXXXXAATALRFTGRNGGLRFRNAPP 1715
            RHLASVGETYAQT+ ED+AWSLWP+                   R  G  GGL   N   
Sbjct: 481  RHLASVGETYAQTSIEDSAWSLWPLNSSQVVAGGSQVPRNVVG-RHPGSMGGLNM-NVSR 538

Query: 1716 SVNDNISNILSMADTVREVLPNIPDEIIFQELQRTNSVTVTVNNLLQM 1859
            + NDN++NI++MA+TVREVLP++PDE+IFQ+LQRTNSVTVTVNNLLQM
Sbjct: 539  ASNDNLANIIAMAETVREVLPHVPDELIFQDLQRTNSVTVTVNNLLQM 586


>ref|XP_002303501.1| predicted protein [Populus trichocarpa] gi|222840933|gb|EEE78480.1|
            predicted protein [Populus trichocarpa]
          Length = 581

 Score =  734 bits (1896), Expect = 0.0
 Identities = 375/589 (63%), Positives = 437/589 (74%), Gaps = 2/589 (0%)
 Frame = +3

Query: 99   MGLYLLPISALCTVASLVGLQLWTVVSLEKFNLDGSIAENVIHSGNASHVLDLLLGSHVT 278
            MG   L ISA+CTV S   L   T VSL     DG I EN+ +  NA+H L+LL GS+ T
Sbjct: 1    MGASYLAISAVCTVLSFSVL---TEVSLHILRSDGLIVENLTNFENANHALELLFGSYAT 57

Query: 279  IALLANFVLNVFIFLILCLKAIFFVKLNQTESRKVLERLINYLVYKGAFLPLILPPTIFQ 458
            IAL+ NFV NVFI L LCLK IFF +L  +E++K++ERLINY +YKG  LPL++PPTI Q
Sbjct: 58   IALVVNFVFNVFILLNLCLKTIFFGELYPSETQKLVERLINYAIYKGTLLPLVIPPTISQ 117

Query: 459  AVTWTSWLTVLCTLKMFQALARDRLERLNASPSATPWTYFRXXXXXXXXXXXXXXWIRIC 638
               W+ WLT LC+LKMFQALARDRLERLNASPSATPWTYFR              WI +C
Sbjct: 118  IGLWSIWLTGLCSLKMFQALARDRLERLNASPSATPWTYFRAYSMLLLVLSVDLFWIHMC 177

Query: 639  MLIYRSLGSTMFLLLFFEPLSIAFETLQAIMVHGFQLLDMWLRHSAESNTSCERSHLFDK 818
             +IYRS GS+MFLLLFFEP SIAFET+QA++VHGFQLL++WL HS  ++ +C+R   FD 
Sbjct: 178  YVIYRSTGSSMFLLLFFEPFSIAFETMQAMLVHGFQLLEIWLHHSTGNSANCQRFKFFDA 237

Query: 819  LAAGSLWEWKGTLIRNVGFFLDIMTLLMALCHHFNVWWLHGMAFHLVDAVIFLNIRALGS 998
            + AGSL EWKG LIR++GF LD+  LLMAL H+ ++WWLHG+A HLVD V+F NIRAL S
Sbjct: 238  IRAGSLLEWKGILIRDLGFSLDMAALLMALGHYVHIWWLHGVALHLVDVVLFFNIRALLS 297

Query: 999  AIIKRVRGFIKLTRALRTLHGALPDATSEELEAYDDECAICREPMAKAKKLSCNHLFHLA 1178
            AIIKR++GFIKL  AL  LH AL DATSEEL AYDDECAICREPMAKAK+L C+HLFHLA
Sbjct: 298  AIIKRIKGFIKLRMALDALHAALSDATSEELRAYDDECAICREPMAKAKRLLCSHLFHLA 357

Query: 1179 CLRSWLDQGLSEIYSCPTCRRPLF-ASSESSPLPHPGEVLTDDQLAHQMGSGLDRTLSPG 1355
            CLRSWLDQGL+EIYSCPTCR+PLF    E+    H GEVL D+QLAHQ+  G DR  +PG
Sbjct: 358  CLRSWLDQGLNEIYSCPTCRKPLFLGRPENEANTHTGEVLADEQLAHQINEGFDRQNTPG 417

Query: 1356 QGLPVGAFPDQIQTPSESMPWRGAGLDSRWTHPWTSQGLDGAGPSNAITSVGLGRVQMMM 1535
            + L  GAFP QIQ  +ES PWR AGLDS W   W+ QG DGAGPS A+ SVGLG VQMMM
Sbjct: 418  RALLDGAFPTQIQNSTESSPWRSAGLDSSWLPNWSGQGADGAGPSTAMRSVGLGGVQMMM 477

Query: 1536 RHLASVGETYAQTAFEDTAWSLWPMTHXXXXXXXXXXXXAATALRFTGRN-GGLRFRNAP 1712
            RHLASVGETYAQTA ED AWSLWPM+             AA      GR+ GGL  R A 
Sbjct: 478  RHLASVGETYAQTALEDAAWSLWPMSPSQATPSGSSTPPAA-----AGRHPGGLHMRTAS 532

Query: 1713 PSVNDNISNILSMADTVREVLPNIPDEIIFQELQRTNSVTVTVNNLLQM 1859
             S ND I+NIL+MA+TVREVLP++PDE+I Q+LQRTNS TVTVNNLL M
Sbjct: 533  HSTNDFIANILAMAETVREVLPHVPDELILQDLQRTNSATVTVNNLLHM 581