BLASTX nr result

ID: Coptis23_contig00004407 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00004407
         (1954 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002263429.1| PREDICTED: 3-ketoacyl-CoA synthase 11-like [...   353   e-156
emb|CBI29367.3| unnamed protein product [Vitis vinifera]              338   e-151
dbj|BAJ88442.1| predicted protein [Hordeum vulgare subsp. vulgare]    297   e-125
ref|XP_003576445.1| PREDICTED: probable 3-ketoacyl-CoA synthase ...   295   e-124
ref|NP_001130803.1| uncharacterized protein LOC100191907 [Zea ma...   289   e-121

>ref|XP_002263429.1| PREDICTED: 3-ketoacyl-CoA synthase 11-like [Vitis vinifera]
          Length = 487

 Score =  353 bits (906), Expect(2) = e-156
 Identities = 170/256 (66%), Positives = 208/256 (81%)
 Frame = +1

Query: 268  WSTRPNPVLLLDYACHKPDFDRKCSYEVCQYFVRRSKRFNTVSEEFMRGIYLKSGIGDET 447
            +STRP PVLLL+YAC KP+  R+C+ EV +YF+RRS  F+  SE FMRGIYLKSG+GDET
Sbjct: 76   FSTRPRPVLLLNYACFKPESHRRCTLEVSEYFLRRSHSFSAESEAFMRGIYLKSGLGDET 135

Query: 448  YVPPFIFENDYEAKLKSAFDEAKDGMFSAVNSLLYKTQVDPQSIDILIVTCGSFSPAPXX 627
            Y P F FE   E   + A DEA++GMFSA+++LL KT++D   ID++I+T GSFSP+P  
Sbjct: 136  YAPKFFFEESCEPNFEYAVDEAREGMFSAIDALLSKTRIDASRIDVVIITSGSFSPSPSL 195

Query: 628  XXXXVNHYNLRSDIKTFNLSGMGCSSGVVSIDLAANILRSSTKKQYALVVITENISLNWY 807
                VNHY L+ D+KTFNLSGMGCSSG++SIDLAA ILR+S K  YALVV+TE+ISLNWY
Sbjct: 196  SSLVVNHYKLKPDVKTFNLSGMGCSSGLISIDLAAKILRASRKSLYALVVVTESISLNWY 255

Query: 808  FGDDRSMLVTNCIFRVGCAAAMVTNDSNRRKDAKMELVNSLRTHHGANDSAYNAAVQKED 987
             G++RSMLVTNCIFRVGCAAA++TND + R+ AKMEL +SLRTHHGANDSAY AA Q+ED
Sbjct: 256  CGNNRSMLVTNCIFRVGCAAALMTNDQSLRRIAKMELTHSLRTHHGANDSAYKAAFQQED 315

Query: 988  EKGTIGVSLTKDLIRV 1035
            + GT GV+LTKDLIRV
Sbjct: 316  DNGTTGVALTKDLIRV 331



 Score =  227 bits (579), Expect(2) = e-156
 Identities = 105/137 (76%), Positives = 119/137 (86%)
 Frame = +3

Query: 1158 PLSQLISFAYSVLLSAASRGDTKPIVPDFTTVFDHMCIHTGGKAVIDQVARVMRLNDDVT 1337
            PL QL  + YSV+ S  S G++KPIVPDFTT F+H+CIHTGGKAVI+QV RV++L+D VT
Sbjct: 349  PLCQLAHYLYSVITSTISGGESKPIVPDFTTAFEHLCIHTGGKAVIEQVGRVLKLSDSVT 408

Query: 1338 EPARMCLHRFGNTSSSLVFYELAYFEAKGRIKKGDKTWVLAFGTGFKVCSLVFKSLRDSC 1517
            EPARM LHRFGNTSSSLVFYELAYFEAKGR+KKGD+ W+LAFGTGFKVCSL +K LRDS 
Sbjct: 409  EPARMSLHRFGNTSSSLVFYELAYFEAKGRVKKGDRMWMLAFGTGFKVCSLAWKCLRDSP 468

Query: 1518 KDPDNPWNDCIHRYPVK 1568
            KD DNPW DCIHRYPVK
Sbjct: 469  KDYDNPWRDCIHRYPVK 485


>emb|CBI29367.3| unnamed protein product [Vitis vinifera]
          Length = 482

 Score =  338 bits (867), Expect(2) = e-151
 Identities = 176/318 (55%), Positives = 217/318 (68%), Gaps = 1/318 (0%)
 Frame = +1

Query: 85   PLTNIQLLQASFAXXXXXXXXXXXXXXXXXXPFTHLIHFLSQN-LIISLSCSWCFVISML 261
            PLT IQLLQ SFA                  PFT+L   LS     +SLSC+WC ++S+ 
Sbjct: 6    PLTCIQLLQLSFASLFFFTLLLHTLLSGT--PFTYLFRLLSAAPTSVSLSCAWCVLLSLF 63

Query: 262  YFWSTRPNPVLLLDYACHKPDFDRKCSYEVCQYFVRRSKRFNTVSEEFMRGIYLKSGIGD 441
            YF+STRP PVLLL+YAC KP+  R+C+ EV +YF+RRS  F+  SE FMRGIYLKSG+GD
Sbjct: 64   YFYSTRPRPVLLLNYACFKPESHRRCTLEVSEYFLRRSHSFSAESEAFMRGIYLKSGLGD 123

Query: 442  ETYVPPFIFENDYEAKLKSAFDEAKDGMFSAVNSLLYKTQVDPQSIDILIVTCGSFSPAP 621
            ETY P F FE   E   + A DEA++GMFSA+++LL KT++D   ID++I+T GSFSP+P
Sbjct: 124  ETYAPKFFFEESCEPNFEYAVDEAREGMFSAIDALLSKTRIDASRIDVVIITSGSFSPSP 183

Query: 622  XXXXXXVNHYNLRSDIKTFNLSGMGCSSGVVSIDLAANILRSSTKKQYALVVITENISLN 801
                  VNHY L+ D+KTFNLSGMGCSSG++SIDLAA ILR+S K  YALVV+TE+ISLN
Sbjct: 184  SLSSLVVNHYKLKPDVKTFNLSGMGCSSGLISIDLAAKILRASRKSLYALVVVTESISLN 243

Query: 802  WYFGDDRSMLVTNCIFRVGCAAAMVTNDSNRRKDAKMELVNSLRTHHGANDSAYNAAVQK 981
            WY G++RSMLVTNCIFRVGCAAA++TND                            A Q+
Sbjct: 244  WYCGNNRSMLVTNCIFRVGCAAALMTND--------------------------QTAFQQ 277

Query: 982  EDEKGTIGVSLTKDLIRV 1035
            ED+ GT GV+LTKDLIRV
Sbjct: 278  EDDNGTTGVALTKDLIRV 295



 Score =  224 bits (570), Expect(2) = e-151
 Identities = 103/135 (76%), Positives = 117/135 (86%)
 Frame = +3

Query: 1158 PLSQLISFAYSVLLSAASRGDTKPIVPDFTTVFDHMCIHTGGKAVIDQVARVMRLNDDVT 1337
            PL QL  + YSV+ S  S G++KPIVPDFTT F+H+CIHTGGKAVI+QV RV++L+D VT
Sbjct: 313  PLCQLAHYLYSVITSTISGGESKPIVPDFTTAFEHLCIHTGGKAVIEQVGRVLKLSDSVT 372

Query: 1338 EPARMCLHRFGNTSSSLVFYELAYFEAKGRIKKGDKTWVLAFGTGFKVCSLVFKSLRDSC 1517
            EPARM LHRFGNTSSSLVFYELAYFEAKGR+KKGD+ W+LAFGTGFKVCSL +K LRDS 
Sbjct: 373  EPARMSLHRFGNTSSSLVFYELAYFEAKGRVKKGDRMWMLAFGTGFKVCSLAWKCLRDSP 432

Query: 1518 KDPDNPWNDCIHRYP 1562
            KD DNPW DCIHRYP
Sbjct: 433  KDYDNPWRDCIHRYP 447


>dbj|BAJ88442.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 484

 Score =  297 bits (761), Expect(2) = e-125
 Identities = 139/274 (50%), Positives = 195/274 (71%)
 Frame = +1

Query: 214  LIISLSCSWCFVISMLYFWSTRPNPVLLLDYACHKPDFDRKCSYEVCQYFVRRSKRFNTV 393
            L+  ++ +  FV+++      R  PV LL+Y+CH PD DR+C+ EVC+YF  RSKR+   
Sbjct: 23   LVPLVASALAFVVTVFRRVLGRQRPVYLLNYSCHLPDADRQCNLEVCEYFGLRSKRYTDE 82

Query: 394  SEEFMRGIYLKSGIGDETYVPPFIFENDYEAKLKSAFDEAKDGMFSAVNSLLYKTQVDPQ 573
            + +FMR I+ KSG+G ET+ PPFIF   +E  L  A  EA++G+F+ V+ LL K+ V P+
Sbjct: 83   TADFMRLIFRKSGLGQETFAPPFIFSGKFEKTLAFAIQEAEEGLFTVVSQLLAKSDVSPR 142

Query: 574  SIDILIVTCGSFSPAPXXXXXXVNHYNLRSDIKTFNLSGMGCSSGVVSIDLAANILRSST 753
             + +L+V C  +SP P      V  + ++ D+K ++ +GMGCS+G V ID+AA +LR   
Sbjct: 143  DVSVLVVACSMYSPQPSLASMIVRRFKMKDDVKAYSFAGMGCSAGTVGIDMAARLLRVQR 202

Query: 754  KKQYALVVITENISLNWYFGDDRSMLVTNCIFRVGCAAAMVTNDSNRRKDAKMELVNSLR 933
            +  YALVV+TEN SLNWYFG+++ MLVTNCIFRVG AAA++T+   RR DAK +L+ +LR
Sbjct: 203  RPGYALVVVTENTSLNWYFGNNKHMLVTNCIFRVGSAAALITDVPARRADAKYQLLRTLR 262

Query: 934  THHGANDSAYNAAVQKEDEKGTIGVSLTKDLIRV 1035
            THHGA+D+AYNAAVQ EDE G +GV+LTKDL+RV
Sbjct: 263  THHGADDAAYNAAVQMEDEDGGVGVALTKDLVRV 296



 Score =  179 bits (455), Expect(2) = e-125
 Identities = 87/141 (61%), Positives = 106/141 (75%), Gaps = 3/141 (2%)
 Frame = +3

Query: 1158 PLSQLISFAYSVLLSAASRGDTKP---IVPDFTTVFDHMCIHTGGKAVIDQVARVMRLND 1328
            P+S+L+ + Y V   A S G+ K    +VPDF   F+HMCIH+GGKAVID VA++M    
Sbjct: 314  PVSELLRYVYRVAW-AYSGGNPKAAAGLVPDFQRAFEHMCIHSGGKAVIDTVAKLMGFGP 372

Query: 1329 DVTEPARMCLHRFGNTSSSLVFYELAYFEAKGRIKKGDKTWVLAFGTGFKVCSLVFKSLR 1508
             V EPAR  LHRFGNTSSSLVFYELAYFEAK R++ GD+ W+LAFGTGFK CS+V+++LR
Sbjct: 373  PVVEPARATLHRFGNTSSSLVFYELAYFEAKRRVRAGDRLWMLAFGTGFKACSVVWRALR 432

Query: 1509 DSCKDPDNPWNDCIHRYPVKL 1571
            DS  D DNPWN C HRYP+ L
Sbjct: 433  DSGPDADNPWNGCAHRYPMAL 453


>ref|XP_003576445.1| PREDICTED: probable 3-ketoacyl-CoA synthase 2-like [Brachypodium
            distachyon]
          Length = 481

 Score =  295 bits (755), Expect(2) = e-124
 Identities = 142/264 (53%), Positives = 191/264 (72%)
 Frame = +1

Query: 244  FVISMLYFWSTRPNPVLLLDYACHKPDFDRKCSYEVCQYFVRRSKRFNTVSEEFMRGIYL 423
            F++++L     RP PV LL+Y+CH PD DR+C+ EVC+YF  RS R+   + +FMR I+ 
Sbjct: 27   FLVTVLRVLLRRPRPVYLLNYSCHLPDPDRQCNMEVCEYFGLRSGRYTDETADFMRLIFR 86

Query: 424  KSGIGDETYVPPFIFENDYEAKLKSAFDEAKDGMFSAVNSLLYKTQVDPQSIDILIVTCG 603
            KSG+G ET+ PPFIF   +E  L  A  EA++G+F+ V+ LL K+ V P+ I +L+V C 
Sbjct: 87   KSGLGMETFAPPFIFSGKFEKTLAFAIQEAEEGLFAVVSQLLAKSDVSPRDIGVLVVACS 146

Query: 604  SFSPAPXXXXXXVNHYNLRSDIKTFNLSGMGCSSGVVSIDLAANILRSSTKKQYALVVIT 783
             +SPAP      V  + +   +K+++L+GMGCS+G V ID+AA  LR      YALVV+T
Sbjct: 147  MYSPAPSLASMIVRRFRMDPGVKSYSLAGMGCSAGTVGIDMAARALRVRGTPGYALVVVT 206

Query: 784  ENISLNWYFGDDRSMLVTNCIFRVGCAAAMVTNDSNRRKDAKMELVNSLRTHHGANDSAY 963
            EN SLNWYFG+++ MLVTNCIFRVG AAA+VT+ + RR DAK EL+ +LRTHHGA+D+AY
Sbjct: 207  ENTSLNWYFGNNKHMLVTNCIFRVGSAAALVTDVAARRGDAKYELLRTLRTHHGADDAAY 266

Query: 964  NAAVQKEDEKGTIGVSLTKDLIRV 1035
            NAAVQ EDE G +GV+LTKDL+RV
Sbjct: 267  NAAVQMEDEDGGVGVALTKDLVRV 290



 Score =  177 bits (450), Expect(2) = e-124
 Identities = 86/141 (60%), Positives = 105/141 (74%), Gaps = 3/141 (2%)
 Frame = +3

Query: 1158 PLSQLISFAYSVLLSAASRGDTKP---IVPDFTTVFDHMCIHTGGKAVIDQVARVMRLND 1328
            P+S+L+ + Y V   A S G+ K    +VPDF   F+HMCIH+GGKAVID VA++M    
Sbjct: 308  PVSELLRYVYRVAW-AYSGGNPKAAAAVVPDFQRAFEHMCIHSGGKAVIDTVAKLMGFGP 366

Query: 1329 DVTEPARMCLHRFGNTSSSLVFYELAYFEAKGRIKKGDKTWVLAFGTGFKVCSLVFKSLR 1508
             V EPAR  LHRFGNTSSSLVFYELAYFEAK R++ GD+ W+LAFGTGFK CS V+++LR
Sbjct: 367  AVVEPARATLHRFGNTSSSLVFYELAYFEAKRRVRAGDRVWMLAFGTGFKACSAVWRALR 426

Query: 1509 DSCKDPDNPWNDCIHRYPVKL 1571
            D+  D DNPWN C HRYP+ L
Sbjct: 427  DAGPDADNPWNACAHRYPMAL 447


>ref|NP_001130803.1| uncharacterized protein LOC100191907 [Zea mays]
            gi|194690152|gb|ACF79160.1| unknown [Zea mays]
            gi|223949629|gb|ACN28898.1| unknown [Zea mays]
            gi|223949861|gb|ACN29014.1| unknown [Zea mays]
            gi|224031191|gb|ACN34671.1| unknown [Zea mays]
            gi|414885137|tpg|DAA61151.1| TPA: hypothetical protein
            ZEAMMB73_129897 [Zea mays]
          Length = 468

 Score =  289 bits (739), Expect(2) = e-121
 Identities = 137/264 (51%), Positives = 189/264 (71%)
 Frame = +1

Query: 244  FVISMLYFWSTRPNPVLLLDYACHKPDFDRKCSYEVCQYFVRRSKRFNTVSEEFMRGIYL 423
            F+ ++L     R  PV LL+Y+CH PD +R+ + EVC+YF  + +R++    +FMR +Y 
Sbjct: 38   FLATVLRRLLRRQRPVYLLNYSCHLPDAERQVNLEVCEYFGLKCRRYSDDIADFMRLVYS 97

Query: 424  KSGIGDETYVPPFIFENDYEAKLKSAFDEAKDGMFSAVNSLLYKTQVDPQSIDILIVTCG 603
            KSG+G ET+ PPFI+   +E  L  A  EA++G+F+ V  LL K+ V P  I +L+V C 
Sbjct: 98   KSGLGQETFAPPFIYSGKFEKTLAFAIQEAEEGLFAVVEQLLAKSDVSPSDISVLVVACS 157

Query: 604  SFSPAPXXXXXXVNHYNLRSDIKTFNLSGMGCSSGVVSIDLAANILRSSTKKQYALVVIT 783
             FSP P      ++ +N+R D+K+++++GMGCS+G V ID AA  LRS     YALVV+T
Sbjct: 158  MFSPMPSLASMIMHRFNMRPDVKSYSVAGMGCSAGTVGIDTAARSLRSRRTPGYALVVVT 217

Query: 784  ENISLNWYFGDDRSMLVTNCIFRVGCAAAMVTNDSNRRKDAKMELVNSLRTHHGANDSAY 963
            EN SLNWYFG ++ MLVTNCIFRVG AAA+VT+  +RR DAK ELV +LRTHHGA+D+A+
Sbjct: 218  ENTSLNWYFGKNKHMLVTNCIFRVGSAAALVTDVPSRRPDAKYELVRTLRTHHGADDAAF 277

Query: 964  NAAVQKEDEKGTIGVSLTKDLIRV 1035
            NAA+Q EDE+G +GV+LTKDL+RV
Sbjct: 278  NAALQMEDEEGNLGVALTKDLVRV 301



 Score =  176 bits (447), Expect(2) = e-121
 Identities = 83/139 (59%), Positives = 106/139 (76%), Gaps = 3/139 (2%)
 Frame = +3

Query: 1158 PLSQLISFAYSVLLSAASRGDTKPI---VPDFTTVFDHMCIHTGGKAVIDQVARVMRLND 1328
            P+S+++ +A+ V  + A+ G++K     VPDF   F+H CIH+GGKAVID +AR+M    
Sbjct: 319  PVSEMLRYAWRVARAYAA-GNSKAAAAEVPDFQRAFEHFCIHSGGKAVIDSIARLMGFGP 377

Query: 1329 DVTEPARMCLHRFGNTSSSLVFYELAYFEAKGRIKKGDKTWVLAFGTGFKVCSLVFKSLR 1508
             V EPAR  LHRFGNTSSSLVFYELAYFEAK R++ GD+ W+LAFGTGFK CS V+++LR
Sbjct: 378  YVVEPARSTLHRFGNTSSSLVFYELAYFEAKRRVRAGDRLWMLAFGTGFKACSNVWRALR 437

Query: 1509 DSCKDPDNPWNDCIHRYPV 1565
            D+  D DNPWN C+HRYPV
Sbjct: 438  DAAPDADNPWNGCVHRYPV 456


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