BLASTX nr result

ID: Coptis23_contig00004398 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00004398
         (846 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN80134.1| hypothetical protein VITISV_012033 [Vitis vinifera]   216   5e-54
gb|AFW90592.1| germin-like protein subfamily 1 member 20 precurs...   216   7e-54
ref|XP_002276644.1| PREDICTED: putative germin-like protein 2-1 ...   216   7e-54
ref|XP_002333092.1| predicted protein [Populus trichocarpa] gi|2...   214   1e-53
ref|XP_002276315.1| PREDICTED: putative germin-like protein 2-1 ...   214   3e-53

>emb|CAN80134.1| hypothetical protein VITISV_012033 [Vitis vinifera]
          Length = 224

 Score =  216 bits (550), Expect = 5e-54
 Identities = 103/122 (84%), Positives = 113/122 (92%)
 Frame = -2

Query: 545 DYAPYGLNPPHTHPRATEILVVLEGTLYVGFVTSNPDNRLITKVLYKGDVFVFPVGLIHF 366
           DYAPYGLNPPHTHPRATEILVVLEGTLYVGFVTSNP+NRLI+KVL KGDVFVFP+GLIHF
Sbjct: 102 DYAPYGLNPPHTHPRATEILVVLEGTLYVGFVTSNPENRLISKVLNKGDVFVFPIGLIHF 161

Query: 365 QFNIGKTNTVAFAGLSSQNPGVITIANSVFGSNPPISDDVLAKAFQVDKKVVDHLQAQFW 186
           QFN+G TNTVA A LSSQNPGVITIAN+VFGS+PPIS DVL KAFQ+DK VV++LQ+ FW
Sbjct: 162 QFNVGHTNTVAIAALSSQNPGVITIANAVFGSDPPISIDVLTKAFQLDKDVVNYLQSSFW 221

Query: 185 MD 180
            D
Sbjct: 222 WD 223



 Score = 89.0 bits (219), Expect = 1e-15
 Identities = 40/55 (72%), Positives = 46/55 (83%)
 Frame = -1

Query: 843 DPSPLQDFCVAINETKDGVFVNGKFCKGPELASANDFFLRGLHIPGNTSNQLGSA 679
           DPSPLQD CVA+++ K  VFVNGKFCK P+LA A+DFF  GLHIPGNTSN +GSA
Sbjct: 25  DPSPLQDTCVAVDDPKAAVFVNGKFCKDPKLAMADDFFFSGLHIPGNTSNPVGSA 79


>gb|AFW90592.1| germin-like protein subfamily 1 member 20 precursor [Solanum
           tuberosum]
          Length = 228

 Score =  216 bits (549), Expect = 7e-54
 Identities = 102/128 (79%), Positives = 114/128 (89%), Gaps = 4/128 (3%)
 Frame = -2

Query: 545 DYAPYGLNPPHTHPRATEILVVLEGTLYVGFVTSNPD----NRLITKVLYKGDVFVFPVG 378
           DYAPYGLNPPHTHPR TE+L VLEGTLYVGFV SNP     N+L TK+L+ GDVFVFP+G
Sbjct: 101 DYAPYGLNPPHTHPRGTEVLTVLEGTLYVGFVLSNPGPNMKNKLFTKILHPGDVFVFPIG 160

Query: 377 LIHFQFNIGKTNTVAFAGLSSQNPGVITIANSVFGSNPPISDDVLAKAFQVDKKVVDHLQ 198
           LIHFQFN+GKT  VAFAGLSSQNPGVITIAN+VFGS+PPI+DD+LAKAFQVDKKVVD+LQ
Sbjct: 161 LIHFQFNVGKTKAVAFAGLSSQNPGVITIANAVFGSDPPINDDILAKAFQVDKKVVDYLQ 220

Query: 197 AQFWMDIN 174
           +QFW D N
Sbjct: 221 SQFWWDNN 228



 Score = 82.0 bits (201), Expect = 2e-13
 Identities = 36/56 (64%), Positives = 45/56 (80%)
 Frame = -1

Query: 846 SDPSPLQDFCVAINETKDGVFVNGKFCKGPELASANDFFLRGLHIPGNTSNQLGSA 679
           SDPSPLQDFCVA+N++   VFVNGK CK P + +A+DFF  GL++ GNTSN +GSA
Sbjct: 23  SDPSPLQDFCVAVNDSMTTVFVNGKVCKDPRVVTADDFFKSGLNVAGNTSNNVGSA 78


>ref|XP_002276644.1| PREDICTED: putative germin-like protein 2-1 [Vitis vinifera]
          Length = 228

 Score =  216 bits (549), Expect = 7e-54
 Identities = 103/122 (84%), Positives = 110/122 (90%)
 Frame = -2

Query: 545 DYAPYGLNPPHTHPRATEILVVLEGTLYVGFVTSNPDNRLITKVLYKGDVFVFPVGLIHF 366
           DYAPYGLNPPHTHPRATEIL VLEGTLYVGFVTSNPDNRLI+KVLYKGDVFVFP GLIHF
Sbjct: 103 DYAPYGLNPPHTHPRATEILTVLEGTLYVGFVTSNPDNRLISKVLYKGDVFVFPQGLIHF 162

Query: 365 QFNIGKTNTVAFAGLSSQNPGVITIANSVFGSNPPISDDVLAKAFQVDKKVVDHLQAQFW 186
           Q N+GKTN VA A LSSQNPGVITIAN+VFGS P IS DVL KAFQVDK V+++LQ+QFW
Sbjct: 163 QLNVGKTNAVAIASLSSQNPGVITIANAVFGSKPAISADVLTKAFQVDKNVINYLQSQFW 222

Query: 185 MD 180
            D
Sbjct: 223 TD 224



 Score = 96.7 bits (239), Expect = 6e-18
 Identities = 42/55 (76%), Positives = 48/55 (87%)
 Frame = -1

Query: 846 SDPSPLQDFCVAINETKDGVFVNGKFCKGPELASANDFFLRGLHIPGNTSNQLGS 682
           SDPSPLQDFCVA+N+T D VFVNGKFCK P+LA+ NDFF  GL +PGNTSN+LGS
Sbjct: 25  SDPSPLQDFCVAVNDTNDSVFVNGKFCKDPKLATPNDFFFSGLRVPGNTSNKLGS 79


>ref|XP_002333092.1| predicted protein [Populus trichocarpa] gi|222834858|gb|EEE73307.1|
           predicted protein [Populus trichocarpa]
          Length = 225

 Score =  214 bits (546), Expect = 1e-53
 Identities = 105/125 (84%), Positives = 110/125 (88%), Gaps = 1/125 (0%)
 Frame = -2

Query: 545 DYAPYG-LNPPHTHPRATEILVVLEGTLYVGFVTSNPDNRLITKVLYKGDVFVFPVGLIH 369
           DYAPYG LNPPHTHPRATEIL VLEGTLYVGFVTSNPDNRLITKVL+ GDVFVFPVGLIH
Sbjct: 101 DYAPYGGLNPPHTHPRATEILTVLEGTLYVGFVTSNPDNRLITKVLHPGDVFVFPVGLIH 160

Query: 368 FQFNIGKTNTVAFAGLSSQNPGVITIANSVFGSNPPISDDVLAKAFQVDKKVVDHLQAQF 189
           FQFN+GKT   A   LSSQNPGVITIAN+VFGS PPI  DVLAKAFQVDKK+VD+LQ QF
Sbjct: 161 FQFNVGKTKASAIGALSSQNPGVITIANAVFGSTPPIRSDVLAKAFQVDKKIVDYLQKQF 220

Query: 188 WMDIN 174
           W D N
Sbjct: 221 WYDNN 225



 Score = 93.6 bits (231), Expect = 5e-17
 Identities = 43/55 (78%), Positives = 48/55 (87%)
 Frame = -1

Query: 846 SDPSPLQDFCVAINETKDGVFVNGKFCKGPELASANDFFLRGLHIPGNTSNQLGS 682
           SDPSPLQDFCVAIN+TKDGVFVNGKFCK P+LA+ NDFF  GL+I  NTSN +GS
Sbjct: 23  SDPSPLQDFCVAINDTKDGVFVNGKFCKDPKLATENDFFFPGLNIARNTSNPVGS 77


>ref|XP_002276315.1| PREDICTED: putative germin-like protein 2-1 [Vitis vinifera]
          Length = 225

 Score =  214 bits (544), Expect = 3e-53
 Identities = 103/122 (84%), Positives = 109/122 (89%)
 Frame = -2

Query: 545 DYAPYGLNPPHTHPRATEILVVLEGTLYVGFVTSNPDNRLITKVLYKGDVFVFPVGLIHF 366
           DYAPYGLNPPHTHPRATEIL VLEGTLYVGFVTSNPDNRLI+KVLYKGDVFVFP GLIHF
Sbjct: 100 DYAPYGLNPPHTHPRATEILTVLEGTLYVGFVTSNPDNRLISKVLYKGDVFVFPQGLIHF 159

Query: 365 QFNIGKTNTVAFAGLSSQNPGVITIANSVFGSNPPISDDVLAKAFQVDKKVVDHLQAQFW 186
           Q N+GKTN VA A LSSQNPGVITIAN+VFGS P IS DVL KAFQVDK  V++LQ+QFW
Sbjct: 160 QLNVGKTNAVAIASLSSQNPGVITIANAVFGSKPAISADVLTKAFQVDKNEVNYLQSQFW 219

Query: 185 MD 180
            D
Sbjct: 220 TD 221



 Score = 94.7 bits (234), Expect = 2e-17
 Identities = 41/55 (74%), Positives = 48/55 (87%)
 Frame = -1

Query: 846 SDPSPLQDFCVAINETKDGVFVNGKFCKGPELASANDFFLRGLHIPGNTSNQLGS 682
           SDPSPLQDFCVA+N+T D VFVNGKFC+ P+LA+ NDFF  GL +PGNTSN+LGS
Sbjct: 22  SDPSPLQDFCVAVNDTNDTVFVNGKFCRDPKLATPNDFFFSGLRVPGNTSNKLGS 76


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