BLASTX nr result

ID: Coptis23_contig00004396 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00004396
         (431 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|NP_001237603.1| ubiquitin carrier protein 4 [Glycine max] gi...    96   3e-18
ref|XP_003548669.1| PREDICTED: ubiquitin-conjugating enzyme E2 5...    96   3e-18
ref|XP_003627554.1| Ubiquitin carrier protein [Medicago truncatu...    95   5e-18
gb|AFK34026.1| unknown [Medicago truncatula]                           94   9e-18
ref|XP_002302592.1| predicted protein [Populus trichocarpa] gi|1...    94   9e-18

>ref|NP_001237603.1| ubiquitin carrier protein 4 [Glycine max]
           gi|6066285|gb|AAF03236.1|AF180143_1 ubiquitin carrier
           protein 4 [Glycine max]
          Length = 183

 Score = 95.9 bits (237), Expect = 3e-18
 Identities = 44/46 (95%), Positives = 46/46 (100%)
 Frame = -1

Query: 431 QLLLYPNPSDPLNGEAAALMMRDKSTYEQRVKEYCEKYAKPEDIGA 294
           QLLLYPNPSDPLNGEAAALMMRD++TYEQRVKEYCEKYAKPEDIGA
Sbjct: 109 QLLLYPNPSDPLNGEAAALMMRDRATYEQRVKEYCEKYAKPEDIGA 154


>ref|XP_003548669.1| PREDICTED: ubiquitin-conjugating enzyme E2 5-like [Glycine max]
          Length = 183

 Score = 95.9 bits (237), Expect = 3e-18
 Identities = 44/46 (95%), Positives = 46/46 (100%)
 Frame = -1

Query: 431 QLLLYPNPSDPLNGEAAALMMRDKSTYEQRVKEYCEKYAKPEDIGA 294
           QLLLYPNPSDPLNGEAAALMMRD++TYEQRVKEYCEKYAKPEDIGA
Sbjct: 109 QLLLYPNPSDPLNGEAAALMMRDRATYEQRVKEYCEKYAKPEDIGA 154


>ref|XP_003627554.1| Ubiquitin carrier protein [Medicago truncatula]
           gi|355521576|gb|AET02030.1| Ubiquitin carrier protein
           [Medicago truncatula]
          Length = 191

 Score = 95.1 bits (235), Expect = 5e-18
 Identities = 44/46 (95%), Positives = 45/46 (97%)
 Frame = -1

Query: 431 QLLLYPNPSDPLNGEAAALMMRDKSTYEQRVKEYCEKYAKPEDIGA 294
           QLLLYPNPSDPLNGEAAALMMRD+ TYEQRVKEYCEKYAKPEDIGA
Sbjct: 115 QLLLYPNPSDPLNGEAAALMMRDRPTYEQRVKEYCEKYAKPEDIGA 160


>gb|AFK34026.1| unknown [Medicago truncatula]
          Length = 185

 Score = 94.4 bits (233), Expect = 9e-18
 Identities = 43/46 (93%), Positives = 45/46 (97%)
 Frame = -1

Query: 431 QLLLYPNPSDPLNGEAAALMMRDKSTYEQRVKEYCEKYAKPEDIGA 294
           QLLLYPNPSDPLNGEAAALMMRD+ TYEQRVKEYCEKYAKPED+GA
Sbjct: 109 QLLLYPNPSDPLNGEAAALMMRDRPTYEQRVKEYCEKYAKPEDLGA 154


>ref|XP_002302592.1| predicted protein [Populus trichocarpa] gi|118489895|gb|ABK96745.1|
           unknown [Populus trichocarpa x Populus deltoides]
           gi|222844318|gb|EEE81865.1| predicted protein [Populus
           trichocarpa]
          Length = 183

 Score = 94.4 bits (233), Expect = 9e-18
 Identities = 44/46 (95%), Positives = 44/46 (95%)
 Frame = -1

Query: 431 QLLLYPNPSDPLNGEAAALMMRDKSTYEQRVKEYCEKYAKPEDIGA 294
           QLLLYPNPSDPLNGEAAALMMRDK  YEQRVKEYCEKYAKPEDIGA
Sbjct: 109 QLLLYPNPSDPLNGEAAALMMRDKPAYEQRVKEYCEKYAKPEDIGA 154


Top