BLASTX nr result

ID: Coptis23_contig00004395 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00004395
         (635 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|NP_001234617.1| starch synthase IV [Solanum lycopersicum] gi...   161   8e-38
ref|XP_002274716.1| PREDICTED: uncharacterized protein LOC100257...   160   2e-37
ref|XP_003524791.1| PREDICTED: uncharacterized protein LOC100788...   155   5e-36
ref|XP_002519725.1| starch synthase, putative [Ricinus communis]...   154   1e-35
ref|XP_003531080.1| PREDICTED: glycogen synthase-like [Glycine max]   154   1e-35

>ref|NP_001234617.1| starch synthase IV [Solanum lycopersicum] gi|247643234|gb|ACT09058.1|
            starch synthase IV precursor [Solanum lycopersicum]
          Length = 1001

 Score =  161 bits (408), Expect = 8e-38
 Identities = 74/103 (71%), Positives = 91/103 (88%)
 Frame = +3

Query: 3    MISMRYGAVPIARKTGGLNDSVFDVDDDAIPLHFRNGFTFVTADEQGANSSLERAFNHYR 182
            MI+MRYG++PIARKTGGLNDSVFDVDDD+IPL FRNGFTF TADEQG N++LERAFN+Y 
Sbjct: 898  MIAMRYGSIPIARKTGGLNDSVFDVDDDSIPLQFRNGFTFATADEQGFNNALERAFNYYM 957

Query: 183  KSSESWQQLVQRNMKIDFSWDSSASQYIDLYEKSVARAKSSKR 311
             + E W++ VQ++M IDFSWDSSASQY +LYEK+V RA+++ R
Sbjct: 958  NNYEIWKEFVQKDMSIDFSWDSSASQYEELYEKAVLRARAASR 1000


>ref|XP_002274716.1| PREDICTED: uncharacterized protein LOC100257130 [Vitis vinifera]
            gi|297740652|emb|CBI30834.3| unnamed protein product
            [Vitis vinifera]
          Length = 1011

 Score =  160 bits (405), Expect = 2e-37
 Identities = 72/101 (71%), Positives = 90/101 (89%)
 Frame = +3

Query: 3    MISMRYGAVPIARKTGGLNDSVFDVDDDAIPLHFRNGFTFVTADEQGANSSLERAFNHYR 182
            MI+MRYG++PIARKTGGLNDSVFDVDDD IPL FRNG+TF+  DEQG N +LERAFNHY+
Sbjct: 908  MIAMRYGSIPIARKTGGLNDSVFDVDDDTIPLQFRNGYTFLNPDEQGLNGALERAFNHYK 967

Query: 183  KSSESWQQLVQRNMKIDFSWDSSASQYIDLYEKSVARAKSS 305
             + ESWQ+LV+++M IDFSW+SSA QY ++YEKSVARA+++
Sbjct: 968  TNKESWQKLVKKDMNIDFSWESSALQYEEIYEKSVARARAT 1008


>ref|XP_003524791.1| PREDICTED: uncharacterized protein LOC100788308 [Glycine max]
          Length = 989

 Score =  155 bits (393), Expect = 5e-36
 Identities = 74/104 (71%), Positives = 88/104 (84%)
 Frame = +3

Query: 3    MISMRYGAVPIARKTGGLNDSVFDVDDDAIPLHFRNGFTFVTADEQGANSSLERAFNHYR 182
            MISMRYGA+PI RKTGGLNDSVFDVDDD IP  FRNGFTFV ADEQG N +L RAFN + 
Sbjct: 886  MISMRYGAIPIVRKTGGLNDSVFDVDDDTIPSQFRNGFTFVNADEQGLNGALVRAFNLFN 945

Query: 183  KSSESWQQLVQRNMKIDFSWDSSASQYIDLYEKSVARAKSSKRA 314
             + ESW+QLVQ++M IDFSW++S++QY +LY KSVARAK++K A
Sbjct: 946  NNPESWKQLVQKDMNIDFSWETSSAQYEELYLKSVARAKAAKLA 989


>ref|XP_002519725.1| starch synthase, putative [Ricinus communis]
            gi|223541142|gb|EEF42698.1| starch synthase, putative
            [Ricinus communis]
          Length = 998

 Score =  154 bits (390), Expect = 1e-35
 Identities = 71/101 (70%), Positives = 88/101 (87%)
 Frame = +3

Query: 3    MISMRYGAVPIARKTGGLNDSVFDVDDDAIPLHFRNGFTFVTADEQGANSSLERAFNHYR 182
            MI+MRYG++PIARKTGGLNDSVFDVDD  IPL F+NGFTF+  DEQG + +LERAFN+YR
Sbjct: 894  MIAMRYGSIPIARKTGGLNDSVFDVDDVTIPLQFQNGFTFLNPDEQGISGALERAFNYYR 953

Query: 183  KSSESWQQLVQRNMKIDFSWDSSASQYIDLYEKSVARAKSS 305
             + E WQ+LVQ++M IDFSW+SSA+QY +LY KSVARAK++
Sbjct: 954  NNPEGWQKLVQKDMNIDFSWESSAAQYEELYSKSVARAKAA 994


>ref|XP_003531080.1| PREDICTED: glycogen synthase-like [Glycine max]
          Length = 873

 Score =  154 bits (389), Expect = 1e-35
 Identities = 73/104 (70%), Positives = 87/104 (83%)
 Frame = +3

Query: 3    MISMRYGAVPIARKTGGLNDSVFDVDDDAIPLHFRNGFTFVTADEQGANSSLERAFNHYR 182
            MISMRYGA+PI RKTGGLNDSVFDVDDD IP  FRNGFTFV ADEQG N +L RAFN + 
Sbjct: 770  MISMRYGAIPIVRKTGGLNDSVFDVDDDTIPSQFRNGFTFVNADEQGLNGALVRAFNLFN 829

Query: 183  KSSESWQQLVQRNMKIDFSWDSSASQYIDLYEKSVARAKSSKRA 314
             + E W+QLVQ++M IDFSW++S++QY +LY KSVARAK++K A
Sbjct: 830  NNPEGWKQLVQKDMNIDFSWETSSAQYEELYLKSVARAKAAKGA 873


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