BLASTX nr result

ID: Coptis23_contig00004392 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00004392
         (1225 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002269010.2| PREDICTED: hsp70 nucleotide exchange factor ...   406   e-111
ref|XP_002512713.1| sil1, putative [Ricinus communis] gi|2235486...   375   e-101
emb|CBI29304.3| unnamed protein product [Vitis vinifera]              371   e-100
ref|XP_004140659.1| PREDICTED: nucleotide exchange factor SIL1-l...   371   e-100
ref|XP_002297899.1| predicted protein [Populus trichocarpa] gi|2...   369   e-100

>ref|XP_002269010.2| PREDICTED: hsp70 nucleotide exchange factor FES1 [Vitis vinifera]
          Length = 395

 Score =  406 bits (1043), Expect = e-111
 Identities = 219/359 (61%), Positives = 268/359 (74%), Gaps = 7/359 (1%)
 Frame = -1

Query: 1126 DSNNTGQMYWASAKEEGD-----SPEESLVVAND--EFDGGFSSLESMLQWSIGHADPIK 968
            + +++G ++W++AKEEGD       +ES V  ND  + DGGFSSL+ MLQW+IGH+DP K
Sbjct: 29   NKSSSGGLFWSTAKEEGDLMRKSEAQESTVGVNDNADLDGGFSSLDGMLQWAIGHSDPTK 88

Query: 967  LKEAAEDSQRLSTSDLKKRQEEIKELMETLKTPSDAELMKTAIADLNNSSLSLEQHLRAX 788
            LKE A+D QR S ++LKKRQ EIKELME LK PSDA+LM+ AIADLNNSSL +E H RA 
Sbjct: 89   LKETAQDVQRFSPNELKKRQMEIKELMEKLKMPSDAQLMQIAIADLNNSSLPMEDHHRAL 148

Query: 787  XXXXXXXEMIDNANDMNKFGGLAAVIRELNASDQQMRIISAWILGMASQNNPVVQNQILD 608
                   E IDNAND+NK GGL  VIREL+  D ++R  SAWILG ASQNNPVVQ Q+L+
Sbjct: 149  QELLILVEPIDNANDLNKLGGLTVVIRELDNPDPEIRKTSAWILGKASQNNPVVQKQVLE 208

Query: 607  LGALKKLIKMANSSSAEEATKALYAISALIRNNIDGQTLFYAEAGELMLQDIMSSSSVDI 428
            LGAL KL+KM NSS  EEATKALYA+SALIRNN+  Q LFYA+AG+LMLQDI+S+ S+DI
Sbjct: 209  LGALPKLMKMVNSSFVEEATKALYAVSALIRNNLAAQELFYAKAGDLMLQDILSNPSIDI 268

Query: 427  RLKKKAASLVADLANFQLESKNKAGXXXXXXXXXXXSVVDLTTFTDVDLQEKALAAIKNL 248
            RL++K   LV DLA  QLES +KA            SVVDLT  +D+DLQEKAL A+KNL
Sbjct: 269  RLRRKTVFLVGDLAECQLESTHKAELPFFSNRHFLKSVVDLTASSDLDLQEKALIAVKNL 328

Query: 247  LQLNASEALDFKDFCGLDKVLESMREQLRQLMTVEDQSDFLLDMESLLGDVDLIFQKKL 71
            LQL  +EAL FKD+C LD  LE MR+QL+QLM  E Q D+++D+ESL  +V+LIF KKL
Sbjct: 329  LQLRTTEALVFKDYCDLDGALERMRKQLQQLMDEEYQRDYVMDLESLCREVELIFHKKL 387


>ref|XP_002512713.1| sil1, putative [Ricinus communis] gi|223548674|gb|EEF50165.1| sil1,
            putative [Ricinus communis]
          Length = 395

 Score =  375 bits (962), Expect = e-101
 Identities = 205/363 (56%), Positives = 254/363 (69%), Gaps = 10/363 (2%)
 Frame = -1

Query: 1129 NDSNNTGQMYWASAKEEGD-----SPEE-----SLVVANDEFDGGFSSLESMLQWSIGHA 980
            N S+++  ++W++ KEE D      P+E     ++V  +D  DGGFSSL+ MLQW++GH+
Sbjct: 25   NKSSSSSGVFWSTVKEESDLLRKAEPDEDPSAAAVVNDHDHLDGGFSSLDGMLQWAVGHS 84

Query: 979  DPIKLKEAAEDSQRLSTSDLKKRQEEIKELMETLKTPSDAELMKTAIADLNNSSLSLEQH 800
            DP KLKE A+D +RLS +DLK RQ EIKELM+ LK PSDA LM+ AI DL+NSSL LE H
Sbjct: 85   DPEKLKETAQDVRRLSPTDLKNRQLEIKELMDELKMPSDAHLMQNAINDLSNSSLPLEDH 144

Query: 799  LRAXXXXXXXXEMIDNANDMNKFGGLAAVIRELNASDQQMRIISAWILGMASQNNPVVQN 620
             RA        E IDNAND++K GGL  +IRELN  D  +R ISAW+LG ASQNNP VQ 
Sbjct: 145  HRALQELLILVEPIDNANDLSKLGGLGVLIRELNHPDSNIRRISAWVLGKASQNNPFVQK 204

Query: 619  QILDLGALKKLIKMANSSSAEEATKALYAISALIRNNIDGQTLFYAEAGELMLQDIMSSS 440
            Q+L++GAL KL++M  S+ AEE  KALYA+SALIRNN+ GQ LFYAEAG+ MLQ+I+  S
Sbjct: 205  QVLEMGALNKLMQMVKSNCAEEGIKALYAVSALIRNNLAGQELFYAEAGDQMLQEILGDS 264

Query: 439  SVDIRLKKKAASLVADLANFQLESKNKAGXXXXXXXXXXXSVVDLTTFTDVDLQEKALAA 260
            S DIRL++KA  LVADLA  QLE+  +A            SVVDL + TD+DLQEKAL A
Sbjct: 265  STDIRLRRKAVFLVADLAECQLENVGRAELPFFSNRFFLKSVVDLVSSTDLDLQEKALVA 324

Query: 259  IKNLLQLNASEALDFKDFCGLDKVLESMREQLRQLMTVEDQSDFLLDMESLLGDVDLIFQ 80
            +KNLLQL   EA   KDFCGLD  LE MR+QL  LMT E   D+  D+ESL  +V+LIF 
Sbjct: 325  VKNLLQLKTIEASVIKDFCGLDGALERMRQQLHVLMTQETYRDYATDIESLRREVELIFY 384

Query: 79   KKL 71
             KL
Sbjct: 385  SKL 387


>emb|CBI29304.3| unnamed protein product [Vitis vinifera]
          Length = 320

 Score =  371 bits (953), Expect = e-100
 Identities = 199/312 (63%), Positives = 237/312 (75%)
 Frame = -1

Query: 1006 MLQWSIGHADPIKLKEAAEDSQRLSTSDLKKRQEEIKELMETLKTPSDAELMKTAIADLN 827
            MLQW+IGH+DP KLKE A+D QR S ++LKKRQ EIKELME LK PSDA+LM+ AIADLN
Sbjct: 1    MLQWAIGHSDPTKLKETAQDVQRFSPNELKKRQMEIKELMEKLKMPSDAQLMQIAIADLN 60

Query: 826  NSSLSLEQHLRAXXXXXXXXEMIDNANDMNKFGGLAAVIRELNASDQQMRIISAWILGMA 647
            NSSL +E H RA        E IDNAND+NK GGL  VIREL+  D ++R  SAWILG A
Sbjct: 61   NSSLPMEDHHRALQELLILVEPIDNANDLNKLGGLTVVIRELDNPDPEIRKTSAWILGKA 120

Query: 646  SQNNPVVQNQILDLGALKKLIKMANSSSAEEATKALYAISALIRNNIDGQTLFYAEAGEL 467
            SQNNPVVQ Q+L+LGAL KL+KM NSS  EEATKALYA+SALIRNN+  Q LFYA+AG+L
Sbjct: 121  SQNNPVVQKQVLELGALPKLMKMVNSSFVEEATKALYAVSALIRNNLAAQELFYAKAGDL 180

Query: 466  MLQDIMSSSSVDIRLKKKAASLVADLANFQLESKNKAGXXXXXXXXXXXSVVDLTTFTDV 287
            MLQDI+S+ S+DIRL++K   LV DLA  QLES +KA            SVVDLT  +D+
Sbjct: 181  MLQDILSNPSIDIRLRRKTVFLVGDLAECQLESTHKAELPFFSNRHFLKSVVDLTASSDL 240

Query: 286  DLQEKALAAIKNLLQLNASEALDFKDFCGLDKVLESMREQLRQLMTVEDQSDFLLDMESL 107
            DLQEKAL A+KNLLQL  +EAL FKD+C LD  LE MR+QL+QLM  E Q D+++D+ESL
Sbjct: 241  DLQEKALIAVKNLLQLRTTEALVFKDYCDLDGALERMRKQLQQLMDEEYQRDYVMDLESL 300

Query: 106  LGDVDLIFQKKL 71
              +V+LIF KKL
Sbjct: 301  CREVELIFHKKL 312


>ref|XP_004140659.1| PREDICTED: nucleotide exchange factor SIL1-like [Cucumis sativus]
          Length = 395

 Score =  371 bits (952), Expect = e-100
 Identities = 207/369 (56%), Positives = 261/369 (70%), Gaps = 13/369 (3%)
 Frame = -1

Query: 1129 NDSNNTGQMYWASAKEEGD-----SPEE--------SLVVANDEFDGGFSSLESMLQWSI 989
            NDS+  G + W+SAK+EGD      P+E        S+V   D FDGGFSSL+SMLQW+I
Sbjct: 23   NDSSLEG-LIWSSAKQEGDLLIDHRPQEDSSAAAAASVVHDADGFDGGFSSLDSMLQWAI 81

Query: 988  GHADPIKLKEAAEDSQRLSTSDLKKRQEEIKELMETLKTPSDAELMKTAIADLNNSSLSL 809
            GH+DP KLK+ A+D +RLS +++KKRQEEIK+L+E LK PSDA+LM+ A+ DL NSSLSL
Sbjct: 82   GHSDPAKLKDTAQDVKRLSPNEIKKRQEEIKDLIEELKLPSDAKLMQIAVDDLKNSSLSL 141

Query: 808  EQHLRAXXXXXXXXEMIDNANDMNKFGGLAAVIRELNASDQQMRIISAWILGMASQNNPV 629
            E   RA        E IDNAND++K GGLA + RELN  D  +R I+AWILG ASQNNP+
Sbjct: 142  EDRHRALQELLVLVEPIDNANDLDKLGGLAVLTRELNHVDPDVRKIAAWILGKASQNNPI 201

Query: 628  VQNQILDLGALKKLIKMANSSSAEEATKALYAISALIRNNIDGQTLFYAEAGELMLQDIM 449
            VQ Q+L+LGAL KL+ MA S   EEA KALYAIS+L++NN+ GQ LFYAEAGE+MLQDI+
Sbjct: 202  VQKQVLELGALAKLVSMAKSDFVEEAIKALYAISSLVQNNLSGQELFYAEAGEIMLQDIL 261

Query: 448  SSSSVDIRLKKKAASLVADLANFQLESKNKAGXXXXXXXXXXXSVVDLTTFTDVDLQEKA 269
            S+SS+DIRL+KKA  LV+DLA  QLE  ++A            SVV+L   TD+DLQEKA
Sbjct: 262  SNSSMDIRLQKKAVFLVSDLAVTQLEKPDEAERPFFGDRLFLKSVVNLIHSTDIDLQEKA 321

Query: 268  LAAIKNLLQLNASEALDFKDFCGLDKVLESMREQLRQLMTVEDQSDFLLDMESLLGDVDL 89
            L A+KNLL L  ++A   K+FCGLD  LE MR +L+ LM  ED  D+ +D+E L   V+L
Sbjct: 322  LIALKNLLLLRTTKAQVLKEFCGLDAALERMRMKLKVLMEEEDHRDYAMDVEDLRSQVEL 381

Query: 88   IFQKKLESR 62
             F +KL  R
Sbjct: 382  TFLEKLGKR 390


>ref|XP_002297899.1| predicted protein [Populus trichocarpa] gi|222845157|gb|EEE82704.1|
            predicted protein [Populus trichocarpa]
          Length = 400

 Score =  369 bits (948), Expect = e-100
 Identities = 206/368 (55%), Positives = 255/368 (69%), Gaps = 12/368 (3%)
 Frame = -1

Query: 1138 EFGNDSNNTGQMYWASAKEEGD-----SPEES-------LVVANDEFDGGFSSLESMLQW 995
            E  ++++ T  + W++ K+E D      PE S       +V  +D+ DGGFSSLE ML W
Sbjct: 25   ELVDETSATAGLLWSTGKDEPDLLSKAEPENSDDSSAAAVVNDHDDLDGGFSSLEGMLHW 84

Query: 994  SIGHADPIKLKEAAEDSQRLSTSDLKKRQEEIKELMETLKTPSDAELMKTAIADLNNSSL 815
            +IGH+DP KLKE AED QRLS S+L+KRQ E+KELME +K PSDAELM  AI DLNNSS 
Sbjct: 85   AIGHSDPTKLKENAEDVQRLSASELQKRQIELKELMEKMKMPSDAELMHMAIDDLNNSSS 144

Query: 814  SLEQHLRAXXXXXXXXEMIDNANDMNKFGGLAAVIRELNASDQQMRIISAWILGMASQNN 635
            SLE   RA        E +DNAND+NK GGLA VI+EL+  D  +R +SAW+LG A QNN
Sbjct: 145  SLEDRQRALQELLILVEPLDNANDLNKLGGLAIVIQELDHPDHDIRRLSAWVLGKACQNN 204

Query: 634  PVVQNQILDLGALKKLIKMANSSSAEEATKALYAISALIRNNIDGQTLFYAEAGELMLQD 455
              VQ QIL+LGAL KLIKM  SSS EEA KALYA+S LI+N++ GQ  FYAE G+ MLQ+
Sbjct: 205  AAVQKQILELGALSKLIKMVKSSSIEEAIKALYAVSTLIQNHLAGQEFFYAEDGDAMLQE 264

Query: 454  IMSSSSVDIRLKKKAASLVADLANFQLESKNKAGXXXXXXXXXXXSVVDLTTFTDVDLQE 275
            I+S+SS DIRL +KA S+VADLA +QLE+  +A            SVVDLT  TD+DLQE
Sbjct: 265  ILSNSSNDIRLLRKAVSVVADLAEYQLENIIRAESPCFRNRFFLKSVVDLTASTDLDLQE 324

Query: 274  KALAAIKNLLQLNASEALDFKDFCGLDKVLESMREQLRQLMTVEDQSDFLLDMESLLGDV 95
            KAL A+KNLLQL  ++AL  KD C LD  LE MR QL  LM  ED  D+ +D+E+L G+V
Sbjct: 325  KALVAVKNLLQLKTTDALVLKDLCNLDGSLERMRRQLLDLMAEEDHRDYAVDLETLRGEV 384

Query: 94   DLIFQKKL 71
            +LIF +KL
Sbjct: 385  ELIFHEKL 392


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