BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00004387
         (2002 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002274123.2| PREDICTED: probable ubiquitin-conjugating en...   421   e-115
emb|CAN79081.1| hypothetical protein VITISV_004820 [Vitis vinifera]   408   e-111
gb|ABK95695.1| unknown [Populus trichocarpa]                          400   e-109
ref|XP_002517911.1| ubiquitin conjugating enzyme, putative [Rici...   391   e-106
emb|CBI21855.3| unnamed protein product [Vitis vinifera]              388   e-105

>ref|XP_002274123.2| PREDICTED: probable ubiquitin-conjugating enzyme E2 26-like [Vitis
            vinifera]
          Length = 511

 Score =  421 bits (1083), Expect = e-115
 Identities = 219/397 (55%), Positives = 266/397 (67%), Gaps = 3/397 (0%)
 Frame = -3

Query: 1592 INLQAQFDAVDLPTGVELQLPWLEQPAKSLK-PAAMSSSTVPNPLSSHTNKEKKENLNAC 1416
            + LQAQFD VD+P GVE  +PWL+ P  S K PA + +S  P                  
Sbjct: 144  LKLQAQFDNVDIPPGVEASVPWLKDPTPSEKMPAVVDTSPTP------------------ 185

Query: 1415 MQQSLEDQMQQAGTXXXXXXXXXXSCIEKQNPASSNSTLSCQTDTRSENEEKNDVDILEK 1236
               SL+ Q  + G+             E +  A+S+ST+  Q+       + N  D+L K
Sbjct: 186  ---SLQGQCARVGSFSDPGEK------ETKTAATSSSTVPAQSG------DGNQDDVLGK 230

Query: 1235 YRLFKQFDTVQDYSDHHFSRGDSKSKQAPQKWTKTIQQEWKILEKDLPDTIFVRVYEERM 1056
            Y  FKQFDTV+D+SDHHFSR     +Q P+ W K IQ+EWKILE+DLP+TIFVRVYE RM
Sbjct: 231  YLFFKQFDTVEDFSDHHFSRMGFVGEQPPKNWAKKIQEEWKILERDLPETIFVRVYEARM 290

Query: 1055 DLLRAVIIGTPGTPYHDGLFFFDILFPSAYPDVPPQVFYYSGGLRLNPNLYDCGKVCLSL 876
            DLLRAVI+G  GTPYHDGLF FD+LFP  YP VPP V+YYSGGLRLNPNLYDCGKVCLSL
Sbjct: 291  DLLRAVIVGPAGTPYHDGLFVFDVLFPPNYPSVPPMVYYYSGGLRLNPNLYDCGKVCLSL 350

Query: 875  LNTWQGKKEEHWIPGTSTMLQVLLSIQALVLNEKPYFNEPGYEMTAGKREGEMHAQDYNE 696
            LNTW GKK E WIPG STMLQVL+SIQ L+LN KP+FNEPGYE      +GE  ++ YNE
Sbjct: 351  LNTWNGKKTEMWIPGKSTMLQVLVSIQGLILNAKPFFNEPGYENMYVGEDGERRSKQYNE 410

Query: 695  NTFILSCKTMMYTLRRPPKYYEDFVMGHFLLRAHVILEACKAYMEGAQVGFSSGAG-QDM 519
            + FILS KTM+YT+RRPPK++EDFV+GHF  RAH IL ACKAY EG+QVG     G QD+
Sbjct: 411  DVFILSLKTMVYTIRRPPKHFEDFVVGHFRQRAHDILVACKAYKEGSQVGSMVKEGTQDV 470

Query: 518  AKHAVG-SKNLKAEVSAILPRMVQAFSRNGAKDCEQF 411
             +H +  S   K  V  ++  +V  F +NG+KDCEQF
Sbjct: 471  NEHEMSTSHEFKEAVGKMMKTLVTNFIKNGSKDCEQF 507


>emb|CAN79081.1| hypothetical protein VITISV_004820 [Vitis vinifera]
          Length = 532

 Score =  408 bits (1048), Expect = e-111
 Identities = 218/418 (52%), Positives = 265/418 (63%), Gaps = 24/418 (5%)
 Frame = -3

Query: 1592 INLQAQFDAVDLPTGVELQLPWLEQPAKSLK-PAAMSSSTVPNPLSSHTNKEKKENLNAC 1416
            + LQAQFD VD+P GV+  +PWL+ P  S K PA + +S  P                  
Sbjct: 144  LKLQAQFDNVDIPPGVZASVPWLKDPTPSEKMPAVVDTSPTP------------------ 185

Query: 1415 MQQSLEDQMQQAGTXXXXXXXXXXSCIEKQNPASSNSTLSCQTDTRSENEEKNDVDILEK 1236
               SL+ Q    G+             E +  A+S+ST+  Q+       + N  D+L K
Sbjct: 186  ---SLQGQCAPVGSFSDPGEK------ETKTAATSSSTVPAQSG------DGNQDDVLGK 230

Query: 1235 YRLFKQFDTVQDYSDHHFSRGDSKSKQAPQKWTKTIQQEWKILEKDLP------------ 1092
            Y  FKQFDTV+D+SDHHFSR     +Q P+ W K IQ+EWKILE+DLP            
Sbjct: 231  YLFFKQFDTVEDFSDHHFSRMGFVGEQPPKNWAKKIQEEWKILERDLPGKYRLKEGGWCT 290

Query: 1091 ---------DTIFVRVYEERMDLLRAVIIGTPGTPYHDGLFFFDILFPSAYPDVPPQVFY 939
                     +TIFVRVYE RMDLLRAVI+G  GTPYHDGLF FD+LFP  YP VPP V+Y
Sbjct: 291  KEVRQGYGVETIFVRVYEARMDLLRAVIVGPAGTPYHDGLFVFDVLFPPNYPSVPPMVYY 350

Query: 938  YSGGLRLNPNLYDCGKVCLSLLNTWQGKKEEHWIPGTSTMLQVLLSIQALVLNEKPYFNE 759
            YSGGLRLNPNLYDCGKVCLSLLNTW GKK E WIPG STMLQVL+SIQ L+LN KP+FNE
Sbjct: 351  YSGGLRLNPNLYDCGKVCLSLLNTWNGKKTEMWIPGKSTMLQVLVSIQGLILNAKPFFNE 410

Query: 758  PGYEMTAGKREGEMHAQDYNENTFILSCKTMMYTLRRPPKYYEDFVMGHFLLRAHVILEA 579
            PGYE      +GE  ++ YNE+ FILS KTM+YT+RRPPK++EDFV+GHF  RAH IL A
Sbjct: 411  PGYENMYVGEDGERRSKQYNEDVFILSLKTMVYTIRRPPKHFEDFVVGHFRQRAHDILVA 470

Query: 578  CKAYMEGAQVGFSSGAG-QDMAKHAVG-SKNLKAEVSAILPRMVQAFSRNGAKDCEQF 411
            CKAY EG+QVG     G QD+ +H +  S   K  V  ++  +V  F +NG+KDCEQF
Sbjct: 471  CKAYKEGSQVGSMVKEGTQDVNEHEMSTSHEFKEAVGKMMKTLVTNFIKNGSKDCEQF 528


>gb|ABK95695.1| unknown [Populus trichocarpa]
          Length = 526

 Score =  400 bits (1027), Expect = e-109
 Identities = 215/401 (53%), Positives = 264/401 (65%), Gaps = 9/401 (2%)
 Frame = -3

Query: 1586 LQAQFDAVDLPTGVELQLPWLEQPAKSLKPAA-MSSSTVPN-PLSSHTN---KEKKENLN 1422
            +Q+QFD VDLP GVE  LPWL++PA S    +  S+ST+PN  + SHTN    E K    
Sbjct: 146  IQSQFDNVDLPPGVEATLPWLKEPASSSNMISNTSTSTIPNHTIPSHTNHNHSESKIMTT 205

Query: 1421 ACMQQSLEDQMQQAGTXXXXXXXXXXSCIEKQNPASSNSTLSCQTDTRSENEEKNDVDIL 1242
             C+ ++                        K   ++S+S     + +  E E+  + + +
Sbjct: 206  TCLSEN------------------------KWTASASSSMFPADSSSNGEVEDSGENNTM 241

Query: 1241 EKYRLFKQFDTVQDYSDHHFSRGDSKSKQAPQK-WTKTIQQEWKILEKDLPDTIFVRVYE 1065
            +KYR FKQFD V+D+SDHH+ RG S S   P K W K IQ EWK LEKDLPDTIFVRVYE
Sbjct: 242  QKYRNFKQFDNVEDFSDHHY-RGTSVSDLPPPKIWAKRIQDEWKSLEKDLPDTIFVRVYE 300

Query: 1064 ERMDLLRAVIIGTPGTPYHDGLFFFDILFPSAYPDVPPQVFYYSGGLRLNPNLYDCGKVC 885
             RM+LLRAVI G  GTPYHDGLF FD +FP  YPD PP V+YYSGGLRLNPNLY+CGKVC
Sbjct: 301  TRMELLRAVIAGPAGTPYHDGLFVFDCIFPPTYPDAPPMVYYYSGGLRLNPNLYECGKVC 360

Query: 884  LSLLNTWQGKKEEHWIPGTSTMLQVLLSIQALVLNEKPYFNEPGYEMTAGKREGEMHAQD 705
            LSLL TW GK+ E WIPG STMLQVL+SIQAL+LN KP+FNEPGYE +    EG+  ++ 
Sbjct: 361  LSLLGTWSGKETEMWIPGKSTMLQVLVSIQALILNAKPFFNEPGYESSYVGAEGDKRSKK 420

Query: 704  YNENTFILSCKTMMYTLRRPPKYYEDFVMGHFLLRAHVILEACKAYMEGAQVGFSS--GA 531
            YNE  FILS KTMMYTLRRPPK++ED V+GHF  RAH IL ACKAY +GA VG  +    
Sbjct: 421  YNEEVFILSLKTMMYTLRRPPKHFEDLVIGHFHNRAHNILVACKAYADGAIVGSVTVKDG 480

Query: 530  GQDMAKHAVG-SKNLKAEVSAILPRMVQAFSRNGAKDCEQF 411
              D+ K  +G S   KA V  ++  +V  F+R G+ +CEQF
Sbjct: 481  VADVDKADMGASGEFKATVKKMINALVTNFTRFGSINCEQF 521


>ref|XP_002517911.1| ubiquitin conjugating enzyme, putative [Ricinus communis]
            gi|223542893|gb|EEF44429.1| ubiquitin conjugating enzyme,
            putative [Ricinus communis]
          Length = 521

 Score =  391 bits (1005), Expect = e-106
 Identities = 206/397 (51%), Positives = 257/397 (64%), Gaps = 6/397 (1%)
 Frame = -3

Query: 1583 QAQFDAVDLPTGVELQLPWLEQPAKS-LKPAAMSSSTVPNPLSSHTNKEKKENLNACMQQ 1407
            Q+QFD VDLP GVE  LPWL++PA S       S+ST+ +P  S   K K   L+     
Sbjct: 136  QSQFDNVDLPAGVEASLPWLKEPANSGFNTPGTSTSTMSDPSES---KRKSVILDIA--- 189

Query: 1406 SLEDQMQQAGTXXXXXXXXXXSCIEKQNPASSNSTLSCQTDTRSENEEKNDVDILEKYRL 1227
              E + +  G+               +N +S+ +T S       +N+ K  + IL+    
Sbjct: 190  --ETKRKATGSGL------------SENNSSAATTASSSNGEEIDNKRKGVLHILKN--- 232

Query: 1226 FKQFDTVQDYSDHHFSRGDSKSKQAPQK--WTKTIQQEWKILEKDLPDTIFVRVYEERMD 1053
            FKQFDTV+D+SDHH+ R +S  KQ P    W K IQ+EWKILEKDLPDTI VRVYE RM+
Sbjct: 233  FKQFDTVEDFSDHHYCRMESSDKQRPDPRGWAKRIQEEWKILEKDLPDTISVRVYESRME 292

Query: 1052 LLRAVIIGTPGTPYHDGLFFFDILFPSAYPDVPPQVFYYSGGLRLNPNLYDCGKVCLSLL 873
            LLRAVI+G  GTPYHDGLF FD LFPS YP+ PP V+YYSGGLRLNPNLY+CGKVCLSLL
Sbjct: 293  LLRAVIVGPAGTPYHDGLFVFDCLFPSTYPNAPPMVYYYSGGLRLNPNLYECGKVCLSLL 352

Query: 872  NTWQGKKEEHWIPGTSTMLQVLLSIQALVLNEKPYFNEPGYEMTAGKREGEMHAQDYNEN 693
             TW GK+ E WIPG STMLQVL+SIQAL+LN KP+FNEPGYE +     G+  ++ YNE+
Sbjct: 353  GTWSGKQTEMWIPGRSTMLQVLVSIQALILNAKPFFNEPGYETSYAGESGDKESRKYNED 412

Query: 692  TFILSCKTMMYTLRRPPKYYEDFVMGHFLLRAHVILEACKAYMEGAQVG---FSSGAGQD 522
             FILS KTMMYTLRRPPKY+EDFV+ HF +RAH IL ACKAY++GA VG      G  + 
Sbjct: 413  VFILSLKTMMYTLRRPPKYFEDFVICHFYIRAHDILVACKAYLDGATVGTVAVKDGIAEI 472

Query: 521  MAKHAVGSKNLKAEVSAILPRMVQAFSRNGAKDCEQF 411
                   S   +  +      ++  F++ G+ DC +F
Sbjct: 473  NKAEMKASSEFRVTLEKTFNALITNFTKFGSIDCGKF 509


>emb|CBI21855.3| unnamed protein product [Vitis vinifera]
          Length = 472

 Score =  388 bits (996), Expect = e-105
 Identities = 186/282 (65%), Positives = 218/282 (77%), Gaps = 2/282 (0%)
 Frame = -3

Query: 1250 DILEKYRLFKQFDTVQDYSDHHFSRGDSKSKQAPQKWTKTIQQEWKILEKDLPDTIFVRV 1071
            D+L KY  FKQFDTV+D+SDHHFSR     +Q P+ W K IQ+EWKILE+DLP+TIFVRV
Sbjct: 187  DVLGKYLFFKQFDTVEDFSDHHFSRMGFVGEQPPKNWAKKIQEEWKILERDLPETIFVRV 246

Query: 1070 YEERMDLLRAVIIGTPGTPYHDGLFFFDILFPSAYPDVPPQVFYYSGGLRLNPNLYDCGK 891
            YE RMDLLRAVI+G  GTPYHDGLF FD+LFP  YP VPP V+YYSGGLRLNPNLYDCGK
Sbjct: 247  YEARMDLLRAVIVGPAGTPYHDGLFVFDVLFPPNYPSVPPMVYYYSGGLRLNPNLYDCGK 306

Query: 890  VCLSLLNTWQGKKEEHWIPGTSTMLQVLLSIQALVLNEKPYFNEPGYEMTAGKREGEMHA 711
            VCLSLLNTW GKK E WIPG STMLQVL+SIQ L+LN KP+FNEPGYE      +GE  +
Sbjct: 307  VCLSLLNTWNGKKTEMWIPGKSTMLQVLVSIQGLILNAKPFFNEPGYENMYVGEDGERRS 366

Query: 710  QDYNENTFILSCKTMMYTLRRPPKYYEDFVMGHFLLRAHVILEACKAYMEGAQVGFSSGA 531
            + YNE+ FILS KTM+YT+RRPPK++EDFV+GHF  RAH IL ACKAY EG+QVG     
Sbjct: 367  KQYNEDVFILSLKTMVYTIRRPPKHFEDFVVGHFRQRAHDILVACKAYKEGSQVGSMVKE 426

Query: 530  G-QDMAKHAVG-SKNLKAEVSAILPRMVQAFSRNGAKDCEQF 411
            G QD+ +H +  S   K  V  ++  +V  F +NG+KDCEQF
Sbjct: 427  GTQDVNEHEMSTSHEFKEAVGKMMKTLVTNFIKNGSKDCEQF 468