BLASTX nr result

ID: Coptis23_contig00004385 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00004385
         (1299 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002276836.2| PREDICTED: uncharacterized protein LOC100260...   300   7e-79
emb|CBI29944.3| unnamed protein product [Vitis vinifera]              291   3e-76
ref|XP_002319161.1| predicted protein [Populus trichocarpa] gi|2...   286   1e-74
ref|XP_003554014.1| PREDICTED: chaperone protein DnaJ-like [Glyc...   267   4e-69
ref|XP_004141138.1| PREDICTED: uncharacterized protein LOC101205...   266   1e-68

>ref|XP_002276836.2| PREDICTED: uncharacterized protein LOC100260668 [Vitis vinifera]
          Length = 309

 Score =  300 bits (767), Expect = 7e-79
 Identities = 160/314 (50%), Positives = 208/314 (66%), Gaps = 1/314 (0%)
 Frame = -2

Query: 1175 MQAYLLLSPVSIDGSVGFSSLIKGNFL-VGPKIYQQRWNHHHKIKHQRSGVVVVASAAIN 999
            MQA L++ P SI+G    S+  KG  L V P+    R + H +    R        AAIN
Sbjct: 1    MQARLMVGPSSINGGGLISAAAKGMILLVDPRT---RSHGHGRTAKCR------CRAAIN 51

Query: 998  SKQNHYAVLGVSTSASLIDIKKAYRLLARKYHPDVSKDSQAGEIFKSIRFAYDVLSNEET 819
              Q+HYAVLG+S +AS +DIK+AYRLLARKYHPDVSKDSQAGE+FKSIR AY++LSNE T
Sbjct: 52   GDQDHYAVLGLSRAASSVDIKRAYRLLARKYHPDVSKDSQAGEVFKSIRLAYEILSNEAT 111

Query: 818  RAQYDHALKFHEESSKPLRRNWTYDPELDEGVRIYRWAELKRKMRREKYWQQSESTEDKS 639
            R+QYD AL+F E +  P R +  Y+ E ++ +R YRWA+L+RKM+RE+YW++  +     
Sbjct: 112  RSQYDRALRFQEHTGWPWRGSQNYNHEFEDRIRTYRWADLRRKMQRERYWERYNANGQNF 171

Query: 638  SSFVGETEEAYEEEISDDDRGSFSEVLKFGFFTLFFMQTIGAQFTLMLCSLTALLDKKLD 459
            S++  ET+E +EEE  D++RG F+EVL+  F +LF MQT G+Q  L   +L A +D+KLD
Sbjct: 172  SAY-SETDEIFEEETPDEERGPFTEVLRSAFLSLFLMQTFGSQIALTFTALMAFVDRKLD 230

Query: 458  GGYKMGYXXXXXXXXXXXXXXXXXLSFASWACGKTXXXXXXXXXXAMWVGTNLARYAPVP 279
             GYK+GY                 LSFASW CGKT          AMWVG+NLARYAP+P
Sbjct: 231  AGYKLGYLIAWILGGRGGILLTLCLSFASWVCGKTSSSVVTLVVVAMWVGSNLARYAPLP 290

Query: 278  QGALIALLYMSVKL 237
            QGAL+ LLYMS+KL
Sbjct: 291  QGALLTLLYMSIKL 304


>emb|CBI29944.3| unnamed protein product [Vitis vinifera]
          Length = 285

 Score =  291 bits (744), Expect = 3e-76
 Identities = 143/258 (55%), Positives = 184/258 (71%)
 Frame = -2

Query: 1010 AAINSKQNHYAVLGVSTSASLIDIKKAYRLLARKYHPDVSKDSQAGEIFKSIRFAYDVLS 831
            AAIN  Q+HYAVLG+S +AS +DIK+AYRLLARKYHPDVSKDSQAGE+FKSIR AY++LS
Sbjct: 24   AAINGDQDHYAVLGLSRAASSVDIKRAYRLLARKYHPDVSKDSQAGEVFKSIRLAYEILS 83

Query: 830  NEETRAQYDHALKFHEESSKPLRRNWTYDPELDEGVRIYRWAELKRKMRREKYWQQSEST 651
            NE TR+QYD AL+F E +  P R +  Y+ E ++ +R YRWA+L+RKM+RE+YW++  + 
Sbjct: 84   NEATRSQYDRALRFQEHTGWPWRGSQNYNHEFEDRIRTYRWADLRRKMQRERYWERYNAN 143

Query: 650  EDKSSSFVGETEEAYEEEISDDDRGSFSEVLKFGFFTLFFMQTIGAQFTLMLCSLTALLD 471
                S++  ET+E +EEE  D++RG F+EVL+  F +LF MQT G+Q  L   +L A +D
Sbjct: 144  GQNFSAY-SETDEIFEEETPDEERGPFTEVLRSAFLSLFLMQTFGSQIALTFTALMAFVD 202

Query: 470  KKLDGGYKMGYXXXXXXXXXXXXXXXXXLSFASWACGKTXXXXXXXXXXAMWVGTNLARY 291
            +KLD GYK+GY                 LSFASW CGKT          AMWVG+NLARY
Sbjct: 203  RKLDAGYKLGYLIAWILGGRGGILLTLCLSFASWVCGKTSSSVVTLVVVAMWVGSNLARY 262

Query: 290  APVPQGALIALLYMSVKL 237
            AP+PQGAL+ LLYMS+KL
Sbjct: 263  APLPQGALLTLLYMSIKL 280


>ref|XP_002319161.1| predicted protein [Populus trichocarpa] gi|222857537|gb|EEE95084.1|
            predicted protein [Populus trichocarpa]
          Length = 332

 Score =  286 bits (731), Expect = 1e-74
 Identities = 167/329 (50%), Positives = 207/329 (62%), Gaps = 16/329 (4%)
 Frame = -2

Query: 1175 MQAYLLLS---PVSIDGSVGFSS---LIKG--NFLVGPKIYQQRWNH--HHKIKHQRSGV 1026
            MQA LLL    P +ID S  FSS   +I G  N L+G  IY    ++   H+  ++    
Sbjct: 1    MQARLLLVGPIPTTIDASASFSSSSSIITGGRNSLIGSWIYHPNLDNKSRHRKNNKWGST 60

Query: 1025 VVVAS-----AAINS-KQNHYAVLGVSTSASLIDIKKAYRLLARKYHPDVSKDSQAGEIF 864
            VVVAS     AAIN  +Q+HYAVLG+  +A+  DIKKAYR LARKYHPDVSK SQAGE+F
Sbjct: 61   VVVASSSSSWAAINGGEQDHYAVLGLERTATSADIKKAYRFLARKYHPDVSKHSQAGELF 120

Query: 863  KSIRFAYDVLSNEETRAQYDHALKFHEESSKPLRRNWTYDPELDEGVRIYRWAELKRKMR 684
            KSIR AY++LSNE TR QYD  L+F EE+ +   +N  Y PE++  VRIYRWAE+KRK R
Sbjct: 121  KSIRHAYEILSNEVTRTQYDRVLRFQEETGRSYSKNQYYAPEVENWVRIYRWAEMKRKTR 180

Query: 683  REKYWQQSESTEDKSSSFVGETEEAYEEEISDDDRGSFSEVLKFGFFTLFFMQTIGAQFT 504
             E+Y +    +ED   SF  ETEE  EE   D +RG FSEVL+  F +LF + T G+  +
Sbjct: 181  SERYREHYNVSED--PSFYSETEEEAEEGSLDQERGPFSEVLRSAFISLFLLHTFGSLLS 238

Query: 503  LMLCSLTALLDKKLDGGYKMGYXXXXXXXXXXXXXXXXXLSFASWACGKTXXXXXXXXXX 324
            L   SL AL D++LD GYK+GY                 L FASWACGK           
Sbjct: 239  LAFSSLMALFDRQLDAGYKIGYLIAWILGGRGGISLVLCLQFASWACGKRSSSMVALVVV 298

Query: 323  AMWVGTNLARYAPVPQGALIALLYMSVKL 237
            AMWVG+NLAR+AP+PQGAL+ LLYMS+KL
Sbjct: 299  AMWVGSNLARFAPLPQGALVTLLYMSIKL 327


>ref|XP_003554014.1| PREDICTED: chaperone protein DnaJ-like [Glycine max]
          Length = 307

 Score =  267 bits (683), Expect = 4e-69
 Identities = 149/322 (46%), Positives = 196/322 (60%), Gaps = 9/322 (2%)
 Frame = -2

Query: 1175 MQAYLLLSPVSID------GSVGFSSLIKGNFLVGPKIYQQRWNHHHKIKHQRSGVVVVA 1014
            M+++LL+ P+S         S  F S     +   P+              +RS +V+ +
Sbjct: 1    MESHLLVGPISAARYGCAANSSHFHSAASSTWANSPR--------------RRSPLVMAS 46

Query: 1013 S--AAINSKQNHYAVLGVSTSASLIDIKKAYRLLARKYHPDVSKDSQAGEIFKSIRFAYD 840
            S  AA+N  QN+YAVLGV+ +A+ + IK+AYRLLARKYHPDVSKD  A E+FKSI  AY+
Sbjct: 47   SSSAAVNGGQNYYAVLGVARTATTVQIKRAYRLLARKYHPDVSKDPHAAELFKSIHHAYE 106

Query: 839  VLSNEETRAQYDHALKFHEESSKPLRRNWTYDPELDEGVRIYRWAELKRKMRREKYWQQS 660
            VLSNE TR QYD  L+F     KP R  W+Y  E ++  R YRW  +++KM RE+YW+  
Sbjct: 107  VLSNEATRVQYDQELQF---GHKPYREKWSYSTEFEDQARFYRWDRMRKKMDRERYWENY 163

Query: 659  ESTEDKSSSFVGETEEAYEEEIS-DDDRGSFSEVLKFGFFTLFFMQTIGAQFTLMLCSLT 483
               ED    +  ET+E  +E +  D++RGSF EVL+  F +LF +QT+G++F+L   SL 
Sbjct: 164  NVNED---YYTSETDEEEDEVVDLDEERGSFVEVLRSAFMSLFLLQTLGSRFSLTFSSLM 220

Query: 482  ALLDKKLDGGYKMGYXXXXXXXXXXXXXXXXXLSFASWACGKTXXXXXXXXXXAMWVGTN 303
            AL DKKLD GYKMGY                 LSFASW CGKT          A+WVG+ 
Sbjct: 221  ALFDKKLDTGYKMGYVIAWILGGRGGILLTLCLSFASWVCGKTSSSVVALVVVALWVGSY 280

Query: 302  LARYAPVPQGALIALLYMSVKL 237
            LARYAP+PQGAL+ALLYMS+KL
Sbjct: 281  LARYAPLPQGALLALLYMSIKL 302


>ref|XP_004141138.1| PREDICTED: uncharacterized protein LOC101205024 [Cucumis sativus]
            gi|449515603|ref|XP_004164838.1| PREDICTED:
            uncharacterized protein LOC101224715 [Cucumis sativus]
          Length = 316

 Score =  266 bits (679), Expect = 1e-68
 Identities = 151/319 (47%), Positives = 199/319 (62%), Gaps = 6/319 (1%)
 Frame = -2

Query: 1175 MQAYLLLSPVSI-----DGSVGFSSLIKGNFLVGPKIYQQRWNHHHKIKHQRSGVVVVA- 1014
            MQA+ LL P+ I       ++GF S +  + L  P+ Y    N    +   RS  +V + 
Sbjct: 1    MQAHFLLGPIPIPISSASSAIGFYSSLIADSL--PRTYSCNPNSKSTLPLPRSNSIVSSW 58

Query: 1013 SAAINSKQNHYAVLGVSTSASLIDIKKAYRLLARKYHPDVSKDSQAGEIFKSIRFAYDVL 834
            SAAI+  +NHY +LGV  +AS  +IKKA+RLLARKYHPDVSKDS+A + FKSIR AY+VL
Sbjct: 59   SAAIDGHRNHYELLGVPPAASSKEIKKAFRLLARKYHPDVSKDSRAADAFKSIRHAYEVL 118

Query: 833  SNEETRAQYDHALKFHEESSKPLRRNWTYDPELDEGVRIYRWAELKRKMRREKYWQQSES 654
            SNE TRAQYD ALK  E + +P R  W Y P+ +E  +IYRW ELK+K++ E+Y + ++ 
Sbjct: 119  SNEVTRAQYDRALKLQETTDRPYRGKWYYSPDFEERQKIYRWTELKQKIQYERYHKYNKF 178

Query: 653  TEDKSSSFVGETEEAYEEEISDDDRGSFSEVLKFGFFTLFFMQTIGAQFTLMLCSLTALL 474
             +D  SS + E E   + ++    R  F EVLK  F +LF +Q  G++ +L   SL ALL
Sbjct: 179  RQD--SSRIDEEEGESDSQL----RSPFLEVLKSTFLSLFLVQIFGSRLSLTFSSLVALL 232

Query: 473  DKKLDGGYKMGYXXXXXXXXXXXXXXXXXLSFASWACGKTXXXXXXXXXXAMWVGTNLAR 294
            D+KLD GYKMGY                 LSFASW CGK+          AMW+GTNLAR
Sbjct: 233  DRKLDSGYKMGYAIAWLLGGRAGVLLAICLSFASWMCGKSSSGVVAVVVVAMWMGTNLAR 292

Query: 293  YAPVPQGALIALLYMSVKL 237
            YAP+PQGA++ LLYMS+KL
Sbjct: 293  YAPLPQGAVLTLLYMSIKL 311


Top