BLASTX nr result

ID: Coptis23_contig00004371 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00004371
         (1228 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002274881.1| PREDICTED: uncharacterized protein LOC100267...   269   9e-70
ref|XP_002519121.1| COR413-PM2, putative [Ricinus communis] gi|2...   261   3e-67
ref|XP_002310187.1| predicted protein [Populus trichocarpa] gi|2...   261   3e-67
ref|XP_002522385.1| COR413-PM2, putative [Ricinus communis] gi|2...   259   1e-66
ref|XP_002877776.1| COR413-PM2 [Arabidopsis lyrata subsp. lyrata...   257   5e-66

>ref|XP_002274881.1| PREDICTED: uncharacterized protein LOC100267774 [Vitis vinifera]
            gi|298205064|emb|CBI38360.3| unnamed protein product
            [Vitis vinifera]
          Length = 202

 Score =  269 bits (688), Expect = 9e-70
 Identities = 131/202 (64%), Positives = 154/202 (76%)
 Frame = -3

Query: 1010 MGRPEYLAMKTDQPNYELLNSDINQLKIAAKKFANDAVKXXXXXXXXXXLQWXXXXXXXX 831
            MGR EYLAMKTD    +L+NSD+N LKIAAK   N A K          L+W        
Sbjct: 1    MGRMEYLAMKTDPEPTQLINSDLNDLKIAAKNLINHASKLGSLGFGTSFLKWVASFSAIY 60

Query: 830  XXXLDRTNWKTNMLTSLLVPYIFLTLPSFLFGILRGEIGKWIAFIAVVLKLFFPKHFPDW 651
               LDRTNW+TNMLTSLLVPYIF +LP  LF +LRGE+GKWIAFIA+VL+LFFP+HFPDW
Sbjct: 61   LLILDRTNWRTNMLTSLLVPYIFFSLPPVLFNLLRGEVGKWIAFIAIVLRLFFPRHFPDW 120

Query: 650  LEMPGSLIILLVVAPNLIANHVRGGWFGIFICLIIGCYLLQEHIRAAGGFRNAFSKAHGV 471
            LEMPGSLI+LLVVAPN  A+ +RG   G  ICL+IGCYLLQEHIRA+GGFRN+F+++HG+
Sbjct: 121  LEMPGSLILLLVVAPNFFAHTLRGSLIGTVICLLIGCYLLQEHIRASGGFRNSFTRSHGI 180

Query: 470  SNTIGICLLFVYPVWALVLKIL 405
            SNT+GI LL VYPVWALV+  L
Sbjct: 181  SNTLGIILLLVYPVWALVVHFL 202


>ref|XP_002519121.1| COR413-PM2, putative [Ricinus communis] gi|223541784|gb|EEF43332.1|
            COR413-PM2, putative [Ricinus communis]
          Length = 202

 Score =  261 bits (667), Expect = 3e-67
 Identities = 125/202 (61%), Positives = 153/202 (75%)
 Frame = -3

Query: 1010 MGRPEYLAMKTDQPNYELLNSDINQLKIAAKKFANDAVKXXXXXXXXXXLQWXXXXXXXX 831
            MG+  YLAM+T+Q   EL+ SDI  LKIAAKK AN A+K          L+W        
Sbjct: 1    MGKKSYLAMRTEQATSELIVSDIKDLKIAAKKLANHAIKLGGLGFGTSFLEWIASFAAIY 60

Query: 830  XXXLDRTNWKTNMLTSLLVPYIFLTLPSFLFGILRGEIGKWIAFIAVVLKLFFPKHFPDW 651
               LDRTNW+TN+LT LL+PYIF +LPS LF + RG++GKWIAF+AV+L+LFFP+ FPDW
Sbjct: 61   LLILDRTNWRTNILTGLLIPYIFFSLPSILFSLFRGDLGKWIAFVAVILRLFFPRRFPDW 120

Query: 650  LEMPGSLIILLVVAPNLIANHVRGGWFGIFICLIIGCYLLQEHIRAAGGFRNAFSKAHGV 471
            LEMP +LI+L+VVAP+L A+ +R  W G+ ICL I  YLLQEHIRA+GGFRN+F+KAHG+
Sbjct: 121  LEMPAALILLIVVAPSLFASTLRSSWVGLAICLAIAAYLLQEHIRASGGFRNSFTKAHGI 180

Query: 470  SNTIGICLLFVYPVWALVLKIL 405
            SNTIGI LLFVYPVWALVL IL
Sbjct: 181  SNTIGIILLFVYPVWALVLDIL 202


>ref|XP_002310187.1| predicted protein [Populus trichocarpa] gi|222853090|gb|EEE90637.1|
            predicted protein [Populus trichocarpa]
          Length = 203

 Score =  261 bits (667), Expect = 3e-67
 Identities = 126/203 (62%), Positives = 154/203 (75%), Gaps = 1/203 (0%)
 Frame = -3

Query: 1010 MGRPEYLAMKTD-QPNYELLNSDINQLKIAAKKFANDAVKXXXXXXXXXXLQWXXXXXXX 834
            MGR E+L MKTD + +  L+ SD+N+LK+AAKK   DA K          L+W       
Sbjct: 1    MGRMEFLKMKTDDEVSANLIESDVNELKVAAKKLIKDAAKLGGLGFGTSFLKWVASFAAI 60

Query: 833  XXXXLDRTNWKTNMLTSLLVPYIFLTLPSFLFGILRGEIGKWIAFIAVVLKLFFPKHFPD 654
                LDRTNW++NMLTSLLVPYIF +LPS LF   RGE+G+WIAF+AVVL+LFFP+HFPD
Sbjct: 61   YLLILDRTNWRSNMLTSLLVPYIFFSLPSVLFNFFRGEVGRWIAFVAVVLRLFFPRHFPD 120

Query: 653  WLEMPGSLIILLVVAPNLIANHVRGGWFGIFICLIIGCYLLQEHIRAAGGFRNAFSKAHG 474
            WLEMPGS+I+LLVVAPN  A+ ++G   G+FICLII CYLLQEHIRA+GGFRN+F++ HG
Sbjct: 121  WLEMPGSIILLLVVAPNFFAHTLKGSVVGVFICLIIACYLLQEHIRASGGFRNSFTQPHG 180

Query: 473  VSNTIGICLLFVYPVWALVLKIL 405
            +SNT+GI LL VYPVWALVL  L
Sbjct: 181  ISNTVGIILLIVYPVWALVLHFL 203


>ref|XP_002522385.1| COR413-PM2, putative [Ricinus communis] gi|223538463|gb|EEF40069.1|
            COR413-PM2, putative [Ricinus communis]
          Length = 207

 Score =  259 bits (662), Expect = 1e-66
 Identities = 128/204 (62%), Positives = 150/204 (73%), Gaps = 5/204 (2%)
 Frame = -3

Query: 1010 MGRPEYLAMKTDQP-----NYELLNSDINQLKIAAKKFANDAVKXXXXXXXXXXLQWXXX 846
            M R EYL M TD       N  L+ SDIN+LK+AAKK  NDA +          L+W   
Sbjct: 1    MRRIEYLKMSTDNEVTAKGNDNLIQSDINELKVAAKKLINDATRLGGLGFGTSFLKWVSS 60

Query: 845  XXXXXXXXLDRTNWKTNMLTSLLVPYIFLTLPSFLFGILRGEIGKWIAFIAVVLKLFFPK 666
                    LDRTNW+TNMLTSLLVPYIF +LPS LF   RGE+GKWIAFIAVVL+LFFP+
Sbjct: 61   FAAIYLLVLDRTNWRTNMLTSLLVPYIFFSLPSVLFNFFRGEVGKWIAFIAVVLRLFFPR 120

Query: 665  HFPDWLEMPGSLIILLVVAPNLIANHVRGGWFGIFICLIIGCYLLQEHIRAAGGFRNAFS 486
            HFPDWLEMPGSLI+LLVVAP+  A+ ++  W G+ ICL I CYLLQEHIRA+GGFRN+F+
Sbjct: 121  HFPDWLEMPGSLILLLVVAPSFFAHTLKDNWVGVLICLFISCYLLQEHIRASGGFRNSFT 180

Query: 485  KAHGVSNTIGICLLFVYPVWALVL 414
            ++HG+SNTIGI LL VYPVWALVL
Sbjct: 181  QSHGISNTIGIILLIVYPVWALVL 204


>ref|XP_002877776.1| COR413-PM2 [Arabidopsis lyrata subsp. lyrata]
            gi|297323614|gb|EFH54035.1| COR413-PM2 [Arabidopsis
            lyrata subsp. lyrata]
          Length = 204

 Score =  257 bits (656), Expect = 5e-66
 Identities = 125/204 (61%), Positives = 155/204 (75%), Gaps = 2/204 (0%)
 Frame = -3

Query: 1010 MGRPEYLAMKTDQPNY--ELLNSDINQLKIAAKKFANDAVKXXXXXXXXXXLQWXXXXXX 837
            MGR +YLAMKTD  +    L+NSD+ +LK+AAKK  +D  K          L++      
Sbjct: 1    MGRVDYLAMKTDDVDTVAALVNSDMEELKVAAKKLFSDVSKLGGLGFGVSFLKFIASFAA 60

Query: 836  XXXXXLDRTNWKTNMLTSLLVPYIFLTLPSFLFGILRGEIGKWIAFIAVVLKLFFPKHFP 657
                 LDRTNWKT MLTSLL+PYIFL+LPS +F  L GE+GKWIAF+AVVL+LFFPKHFP
Sbjct: 61   IYLLILDRTNWKTKMLTSLLIPYIFLSLPSVIFNFLSGEVGKWIAFVAVVLRLFFPKHFP 120

Query: 656  DWLEMPGSLIILLVVAPNLIANHVRGGWFGIFICLIIGCYLLQEHIRAAGGFRNAFSKAH 477
            DWLEMPGSLI+LLVVAP+ +A+H+RG W G  I L IGCYLLQEHIRA+GGFRN+F++  
Sbjct: 121  DWLEMPGSLILLLVVAPHFLAHHIRGTWIGTVISLFIGCYLLQEHIRASGGFRNSFTQPR 180

Query: 476  GVSNTIGICLLFVYPVWALVLKIL 405
            GVSNT+GI LL VYPVWAL+++++
Sbjct: 181  GVSNTLGIILLLVYPVWALIVRVM 204


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