BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00004345
         (772 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002265288.1| PREDICTED: 60S ribosomal export protein NMD3...   252   5e-65
emb|CAN60703.1| hypothetical protein VITISV_003522 [Vitis vinifera]   252   5e-65
ref|XP_002306035.1| predicted protein [Populus trichocarpa] gi|2...   251   2e-64
ref|XP_002305882.1| predicted protein [Populus trichocarpa] gi|2...   251   2e-64
ref|XP_002533531.1| nonsense-mediated mRNA decay protein, putati...   243   3e-62

>ref|XP_002265288.1| PREDICTED: 60S ribosomal export protein NMD3-like [Vitis vinifera]
          Length = 510

 Score =  252 bits (644), Expect = 5e-65
 Identities = 120/142 (84%), Positives = 133/142 (93%)
 Frame = -1

Query: 772 VSDFGKNDKIFNIRTHLGHLLNPGDYALGYDLYAANHNDIELDKYKNLVLPDAILIKKSY 593
           VSDFGKND IFNIRTHLGHLLNPGD+ALGYD+YAAN ND+EL+KY+  VLP+AILIKKSY
Sbjct: 347 VSDFGKNDTIFNIRTHLGHLLNPGDHALGYDVYAANSNDMELEKYRGFVLPEAILIKKSY 406

Query: 592 EEKRLKKRGKPRSWKLKSMNMEVDNSARRLDEEKMNTEYEEFLRDLEENPELRFNISLYR 413
           EEKR +KRGKPRSWKLKS+NMEVD+S  R D+EKMNTEYE FLRDLEE+PELRFNISLYR
Sbjct: 407 EEKRQRKRGKPRSWKLKSLNMEVDDSKGRADQEKMNTEYEVFLRDLEEDPELRFNISLYR 466

Query: 412 NKEYQPSEMASVTDGEDVPSVP 347
           NKEYQPSEMAS+TDGED+PSVP
Sbjct: 467 NKEYQPSEMASMTDGEDLPSVP 488


>emb|CAN60703.1| hypothetical protein VITISV_003522 [Vitis vinifera]
          Length = 594

 Score =  252 bits (644), Expect = 5e-65
 Identities = 120/142 (84%), Positives = 133/142 (93%)
 Frame = -1

Query: 772 VSDFGKNDKIFNIRTHLGHLLNPGDYALGYDLYAANHNDIELDKYKNLVLPDAILIKKSY 593
           VSDFGKND IFNIRTHLGHLLNPGD+ALGYD+YAAN ND+EL+KY+  VLP+AILIKKSY
Sbjct: 347 VSDFGKNDTIFNIRTHLGHLLNPGDHALGYDVYAANSNDMELEKYRGFVLPEAILIKKSY 406

Query: 592 EEKRLKKRGKPRSWKLKSMNMEVDNSARRLDEEKMNTEYEEFLRDLEENPELRFNISLYR 413
           EEKR +KRGKPRSWKLKS+NMEVD+S  R D+EKMNTEYE FLRDLEE+PELRFNISLYR
Sbjct: 407 EEKRQRKRGKPRSWKLKSLNMEVDDSKGRADQEKMNTEYEVFLRDLEEDPELRFNISLYR 466

Query: 412 NKEYQPSEMASVTDGEDVPSVP 347
           NKEYQPSEMAS+TDGED+PSVP
Sbjct: 467 NKEYQPSEMASMTDGEDLPSVP 488


>ref|XP_002306035.1| predicted protein [Populus trichocarpa] gi|222848999|gb|EEE86546.1|
           predicted protein [Populus trichocarpa]
          Length = 511

 Score =  251 bits (640), Expect = 2e-64
 Identities = 114/142 (80%), Positives = 134/142 (94%)
 Frame = -1

Query: 772 VSDFGKNDKIFNIRTHLGHLLNPGDYALGYDLYAANHNDIELDKYKNLVLPDAILIKKSY 593
           +SDFGKND +FNI+THLGH+L PGDYALGYDL+ AN ND+ELDKYKNLV+P+AIL+KKSY
Sbjct: 348 MSDFGKNDTMFNIKTHLGHILKPGDYALGYDLHGANSNDMELDKYKNLVIPEAILVKKSY 407

Query: 592 EEKRLKKRGKPRSWKLKSMNMEVDNSARRLDEEKMNTEYEEFLRDLEENPELRFNISLYR 413
           EEKR +KRGKPRSWKLKS+NMEVD++  R D+EKMN+EYE+FLRDLEENPELRFN+SLYR
Sbjct: 408 EEKRQRKRGKPRSWKLKSLNMEVDDTRARGDQEKMNSEYEQFLRDLEENPELRFNVSLYR 467

Query: 412 NKEYQPSEMASVTDGEDVPSVP 347
           NKEYQPSEMAS+TDGED+PS+P
Sbjct: 468 NKEYQPSEMASMTDGEDIPSIP 489


>ref|XP_002305882.1| predicted protein [Populus trichocarpa] gi|222848846|gb|EEE86393.1|
           predicted protein [Populus trichocarpa]
          Length = 511

 Score =  251 bits (640), Expect = 2e-64
 Identities = 114/142 (80%), Positives = 134/142 (94%)
 Frame = -1

Query: 772 VSDFGKNDKIFNIRTHLGHLLNPGDYALGYDLYAANHNDIELDKYKNLVLPDAILIKKSY 593
           +SDFGKND +FNI+THLGH+L PGDYALGYDL+ AN ND+ELDKYKNLV+P+AIL+KKSY
Sbjct: 348 MSDFGKNDTMFNIKTHLGHILKPGDYALGYDLHGANSNDMELDKYKNLVIPEAILVKKSY 407

Query: 592 EEKRLKKRGKPRSWKLKSMNMEVDNSARRLDEEKMNTEYEEFLRDLEENPELRFNISLYR 413
           EEKR +KRGKPRSWKLKS+NMEVD++  R D+EKMN+EYE+FLRDLEENPELRFN+SLYR
Sbjct: 408 EEKRQRKRGKPRSWKLKSLNMEVDDTRARGDQEKMNSEYEQFLRDLEENPELRFNVSLYR 467

Query: 412 NKEYQPSEMASVTDGEDVPSVP 347
           NKEYQPSEMAS+TDGED+PS+P
Sbjct: 468 NKEYQPSEMASMTDGEDIPSIP 489


>ref|XP_002533531.1| nonsense-mediated mRNA decay protein, putative [Ricinus communis]
           gi|223526598|gb|EEF28848.1| nonsense-mediated mRNA decay
           protein, putative [Ricinus communis]
          Length = 511

 Score =  243 bits (620), Expect = 3e-62
 Identities = 116/142 (81%), Positives = 129/142 (90%)
 Frame = -1

Query: 772 VSDFGKNDKIFNIRTHLGHLLNPGDYALGYDLYAANHNDIELDKYKNLVLPDAILIKKSY 593
           +SDFGKND IF I+THLGH+L PGD ALGYDLY AN NDIELDKYK LVLP+AILIKKSY
Sbjct: 348 LSDFGKNDTIFFIKTHLGHILKPGDQALGYDLYGANSNDIELDKYKGLVLPEAILIKKSY 407

Query: 592 EEKRLKKRGKPRSWKLKSMNMEVDNSARRLDEEKMNTEYEEFLRDLEENPELRFNISLYR 413
           EEKR +KRGKPR+WKLKS+ MEVD+S  R D+EKM+TEYE+FLRDLEEN ELRFN+SLYR
Sbjct: 408 EEKRQRKRGKPRAWKLKSLEMEVDDSRGRNDQEKMDTEYEQFLRDLEENAELRFNVSLYR 467

Query: 412 NKEYQPSEMASVTDGEDVPSVP 347
           NKEYQPSEMASVTDGEDVPS+P
Sbjct: 468 NKEYQPSEMASVTDGEDVPSIP 489