BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00004344
         (1153 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002275497.1| PREDICTED: WD repeat-containing protein 44-l...   323   7e-86
emb|CBI37573.3| unnamed protein product [Vitis vinifera]              315   1e-83
ref|XP_002517227.1| WD-repeat protein, putative [Ricinus communi...   291   3e-76
ref|XP_003524298.1| PREDICTED: WD repeat-containing protein 44-l...   274   3e-71
ref|XP_002328477.1| predicted protein [Populus trichocarpa] gi|2...   273   6e-71

>ref|XP_002275497.1| PREDICTED: WD repeat-containing protein 44-like [Vitis vinifera]
          Length = 674

 Score =  323 bits (827), Expect = 7e-86
 Identities = 188/388 (48%), Positives = 229/388 (59%), Gaps = 7/388 (1%)
 Frame = -3

Query: 1145 DDGED-VFYDSVDSFRKCDEEVSVS---GGVELDYKIWTDEPGSVLERRQRFLRGMGFSE 978
            D+GED VF+DS+D    C+E V      G  +LDY+IW +EP SV ERR+ FLRGMGF E
Sbjct: 5    DEGEDDVFFDSMDHL-SCEESVRAKEELGCGKLDYEIWRNEPRSVRERRESFLRGMGFVE 63

Query: 977  VVSSQLDCAREIDEDRYSYGCSPKSLGMERVAECSGAVTSSSCLFSTRGEGNTSCSGRDI 798
             V           E    +G  P+ + + R+ ECSGAV+SSS       E N+ CSGR+ 
Sbjct: 64   FVP----------EHDKPFGDPPEMVELGRITECSGAVSSSSVSSINCTEENSVCSGREG 113

Query: 797  DGDTKFLGCELGVLHSAEQLTQREAMAHGXXXXXXXXXXXXXXXXXXXXXXXXXXXXR-- 624
            D     +   L    S +Q    E    G                               
Sbjct: 114  DVGANCMVDALNQQQSEKQNIDFEGETRGLLPSAQEFECNEGQACVEGCKNLGMDKKTRS 173

Query: 623  WWNHFVQKRMKEDVQKSGGSTREQT-APKANRMKVRHNRKKCMEFTAVYMGQQIEAHKGF 447
            WW  F+ KR   D   +   +++ +  PK N+MKVR N+K+CMEFTA+ +GQ+I+AHKGF
Sbjct: 174  WWKRFISKRKGRDAASASQVSKQTSETPKINQMKVRQNKKRCMEFTALCIGQEIQAHKGF 233

Query: 446  ILTMKFSPDRQYLASGGEDGVVRIWRVASTDASGSYFNSKDTSKLVHKVRGRNLIPGRKC 267
            I TMKFSPD QYLASGGEDGVVRIW V STDAS  Y  ++       +V+      GRK 
Sbjct: 234  IWTMKFSPDGQYLASGGEDGVVRIWCVTSTDASCKYLTTEGNFGC--EVKDGKSSFGRKK 291

Query: 266  SKPAPVVIPQKIFQIDESPLHVFYGHTDDVLDLCWSNSNCLLSASKDGTVRLWQVGSNEC 87
               APVVIP KIFQI+ESPL  F+GH  DVLDL WS SN LLS+S D TVRLWQVG +EC
Sbjct: 292  PSYAPVVIPDKIFQIEESPLQEFHGHASDVLDLAWSKSNSLLSSSMDKTVRLWQVGHDEC 351

Query: 86   LQVFKHNNYVTCIQFNPVNDGYFISGSI 3
            L VF+HNNYVTCIQFNPV+D YFISGSI
Sbjct: 352  LNVFRHNNYVTCIQFNPVDDNYFISGSI 379


>emb|CBI37573.3| unnamed protein product [Vitis vinifera]
          Length = 668

 Score =  315 bits (808), Expect = 1e-83
 Identities = 186/390 (47%), Positives = 226/390 (57%), Gaps = 9/390 (2%)
 Frame = -3

Query: 1145 DDGED-VFYDSVDSFRKCDEEVSVS---GGVELDYKIWTDEPGSVLERRQRFLRGMGFSE 978
            D+GED VF+DS+D    C+E V      G  +LDY+IW +EP SV ERR+ FLRGMGF E
Sbjct: 11   DEGEDDVFFDSMDHL-SCEESVRAKEELGCGKLDYEIWRNEPRSVRERRESFLRGMGFVE 69

Query: 977  VVSSQLDCAREIDEDRYSYGCSPKSLGMERVAECSGAVTSSSCLFSTRGEGNTSCSGRDI 798
             V           E    +G  P+ + + R+ ECSGAV+SSS       E N+ CSGR+ 
Sbjct: 70   FVP----------EHDKPFGDPPEMVELGRITECSGAVSSSSVSSINCTEENSVCSGREG 119

Query: 797  DGDTKFLGCELGVLHSAEQLTQREAMAHGXXXXXXXXXXXXXXXXXXXXXXXXXXXXR-- 624
            D     +   L    S +Q    E    G                               
Sbjct: 120  DVGANCMVDALNQQQSEKQNIDFEGETRGLLPSAQEFECNEGQACVEGCKNLGMDKKTRS 179

Query: 623  WWNHFVQKRMKEDVQKSGGSTREQT-APKANRMKVRHNRKKCMEFTAVYMGQQIEAHKGF 447
            WW  F+ KR   D   +   +++ +  PK N+MKVR N+K+CMEFTA+ +GQ+I+AHKGF
Sbjct: 180  WWKRFISKRKGRDAASASQVSKQTSETPKINQMKVRQNKKRCMEFTALCIGQEIQAHKGF 239

Query: 446  ILTMKFSPDRQYLASGGEDGVVRIWRVASTDASGSYFNSKDTSKLVHKVRGRNLIPGRKC 267
            I TMKFSPD QYLASGGEDGVVRIW V STDAS  Y  ++                G   
Sbjct: 240  IWTMKFSPDGQYLASGGEDGVVRIWCVTSTDASCKYLTTE----------------GNFG 283

Query: 266  SKP--APVVIPQKIFQIDESPLHVFYGHTDDVLDLCWSNSNCLLSASKDGTVRLWQVGSN 93
             +P  APVVIP KIFQI+ESPL  F+GH  DVLDL WS SN LLS+S D TVRLWQVG +
Sbjct: 284  CEPSYAPVVIPDKIFQIEESPLQEFHGHASDVLDLAWSKSNSLLSSSMDKTVRLWQVGHD 343

Query: 92   ECLQVFKHNNYVTCIQFNPVNDGYFISGSI 3
            ECL VF+HNNYVTCIQFNPV+D YFISGSI
Sbjct: 344  ECLNVFRHNNYVTCIQFNPVDDNYFISGSI 373


>ref|XP_002517227.1| WD-repeat protein, putative [Ricinus communis]
            gi|223543598|gb|EEF45127.1| WD-repeat protein, putative
            [Ricinus communis]
          Length = 654

 Score =  291 bits (744), Expect = 3e-76
 Identities = 175/401 (43%), Positives = 226/401 (56%), Gaps = 20/401 (4%)
 Frame = -3

Query: 1145 DDGED-VFYDSVDSFRKCDEEVSVSGGVELDYKIWTDEPGSVLERRQRFLRGMGFSEVVS 969
            D+GED +F+DSVD       E S+   V  +Y+IW +EP SV ERRQ FL  MG +E+  
Sbjct: 5    DEGEDDLFFDSVDCL---SPEESI---VNKEYEIWLNEPQSVKERRQSFLCEMGLTELAC 58

Query: 968  SQLDCAREIDEDRYSYGCSPKSLGMERVAECSGAVTSSSCLFSTRGE--GNTSCSGRDID 795
                                + +G++R++E SGAV+SSS L  T GE  GN  C GR+ +
Sbjct: 59   KS----------------DNEIIGLQRISEFSGAVSSSSSL-RTYGEEEGNLDCCGRESN 101

Query: 794  G--------------DTKFLGCELGVLHSAEQLTQREAMAHGXXXXXXXXXXXXXXXXXX 657
                           D   +GCE     ++E LT      H                   
Sbjct: 102  SEANCMIDDMKQYQLDKPIVGCEN---ENSESLTSVSECDHSDSEQYRSYDAGKQKMKS- 157

Query: 656  XXXXXXXXXXRWWNHFVQKRMKED---VQKSGGSTREQTAPKANRMKVRHNRKKCMEFTA 486
                       WW  FVQKR +++   V K      +    + NR+KV+ N+K+CMEFT 
Sbjct: 158  -----------WWKFFVQKRKQKECTCVSKISELNSDTPTIETNRIKVKQNKKRCMEFTG 206

Query: 485  VYMGQQIEAHKGFILTMKFSPDRQYLASGGEDGVVRIWRVASTDASGSYFNSKDTSKLVH 306
            VYM Q++ AHKGFI TMKFSPD QYLA+GGEDG+VRIW+V S +     F S+D+  +  
Sbjct: 207  VYMQQELRAHKGFIWTMKFSPDGQYLATGGEDGIVRIWQVTSVNGCQKSFASEDSFDMKE 266

Query: 305  KVRGRNLIPGRKCSKPAPVVIPQKIFQIDESPLHVFYGHTDDVLDLCWSNSNCLLSASKD 126
                R +         A VVIP++IFQ++ESP+H FYGH+ DVLDL WSNSNCLLS+SKD
Sbjct: 267  GKSKRKM-------SHASVVIPERIFQLEESPVHEFYGHSSDVLDLAWSNSNCLLSSSKD 319

Query: 125  GTVRLWQVGSNECLQVFKHNNYVTCIQFNPVNDGYFISGSI 3
             TVRLWQVGS+ CL +F H +YVTCIQFNPVN+ YFISGSI
Sbjct: 320  KTVRLWQVGSDHCLNIFHHISYVTCIQFNPVNENYFISGSI 360


>ref|XP_003524298.1| PREDICTED: WD repeat-containing protein 44-like [Glycine max]
          Length = 675

 Score =  274 bits (701), Expect = 3e-71
 Identities = 175/399 (43%), Positives = 228/399 (57%), Gaps = 18/399 (4%)
 Frame = -3

Query: 1145 DDGE-DVFYDSVDSFRKCD----EEVSVSGGVELDYKIWTDEPGSVLERRQRFLRGMGFS 981
            DDG+ DVF+DSVDS    D    +E   SG    D +IW  EP SV ERR+RFL+G+G +
Sbjct: 5    DDGDMDVFFDSVDSLSTQDSVLAKEEFGSGRCGYD-EIWVKEPVSVKERRERFLQGLGLA 63

Query: 980  EVVSSQLDCAREIDEDRYSYGCSPKSLGMERVAECSGAVTSSSCLFSTRG--------EG 825
            +  SS   C++E    + +   S  SLG+ER+ ECSGA+ S++C+  T           G
Sbjct: 64   D--SSSKVCSQE----KMNLDDSSISLGLERIRECSGAI-SNACILHTDQVVSEKLILSG 116

Query: 824  NTSCSGRDIDGDTKFLGCELGVLHSAEQLTQREAMAHGXXXXXXXXXXXXXXXXXXXXXX 645
              + S   I  D +F GC       AE   Q +                           
Sbjct: 117  GKAASKEKISLD-EFKGCPQD---EAEANIQGKEHEFSSTAEEHRPREAVSQEEFQDFDM 172

Query: 644  XXXXXXRWWNHFVQKRMKEDVQKSG-GSTREQT---APKANRMKVRHNRKKCMEFTAVYM 477
                   WW  FV      +++KSG G+ R +      K  R+KVR N+K+ +EF+ +Y+
Sbjct: 173  SKRKRKNWWKRFV------NIRKSGEGNVRSKLNAGTNKTRRIKVRQNKKRWLEFSGLYL 226

Query: 476  GQQIEAHKGFILTMKFSPDRQYLASGGEDGVVRIWRVASTDASGSYFNSKD-TSKLVHKV 300
            GQ++ AHKG + TMKFSP  QYLASGGEDGVVRIW V S D S   F  +D TSK   KV
Sbjct: 227  GQEVRAHKGLVWTMKFSPCGQYLASGGEDGVVRIWCVTSLDKSSICFTPEDSTSK--SKV 284

Query: 299  RGRNLIPGRKCSKPAPVVIPQKIFQIDESPLHVFYGHTDDVLDLCWSNSNCLLSASKDGT 120
               N  P +K S    + +P  +FQI+ESPL  F+GH++DVLDL WSNS+ LLS+S D T
Sbjct: 285  ECDNSSPRKKHSSQPFIFLPNSVFQIEESPLQEFFGHSNDVLDLAWSNSDILLSSSMDKT 344

Query: 119  VRLWQVGSNECLQVFKHNNYVTCIQFNPVNDGYFISGSI 3
            VRLWQ+G N+CL VF HN+YVTCIQFNPV++ YFISGSI
Sbjct: 345  VRLWQIGCNQCLNVFHHNDYVTCIQFNPVDENYFISGSI 383


>ref|XP_002328477.1| predicted protein [Populus trichocarpa] gi|222838192|gb|EEE76557.1|
            predicted protein [Populus trichocarpa]
          Length = 655

 Score =  273 bits (698), Expect = 6e-71
 Identities = 165/391 (42%), Positives = 225/391 (57%), Gaps = 9/391 (2%)
 Frame = -3

Query: 1148 DDDGEDVFYDSVDSFRK-CDEEVSVSGGVELDYKIWTDEPGSVLERRQRFLRGMGFSEVV 972
            D+   D+FYDSVD F   CD+         L+Y IW  EP SV ERRQ FLRGMG     
Sbjct: 5    DEGKRDLFYDSVDYFDLGCDQ---------LEYDIWLTEPQSVEERRQGFLRGMGL---- 51

Query: 971  SSQLDCAREIDEDRYSYGCSPKSLGMERVAECSGAVTSSSCLFSTRGEGNT-SCS-GRDI 798
                        D +++    ++ G+ER+ ECSGAV+SSS   +   E N  SCS GR+ 
Sbjct: 52   ------------DGFAFK-RHENTGLERITECSGAVSSSSVPCTNVEEVNVVSCSAGREE 98

Query: 797  DGDTKFLGCELGVLHSAEQLTQREAMAHGXXXXXXXXXXXXXXXXXXXXXXXXXXXX--- 627
            + +     C +  + S +++ + +  +                                 
Sbjct: 99   NSEAN---CVIDQM-SKDKMDKSDVASENENIGPLLDLQGCEQCEEEKCKKCDSGKSIMK 154

Query: 626  RWWNHFVQKRMKEDVQK--SGGSTREQTAPKANRMKVRHNRKKCMEFTAVYMGQQIEAHK 453
             WW HF++K  +E V +  SG S  +  APK NR KV+ N+K CMEFT VYM Q+I+AHK
Sbjct: 155  SWWKHFLKKSKEERVGRCVSGVSKLDTEAPKTNRTKVKQNKKGCMEFTGVYMRQEIQAHK 214

Query: 452  GFILTMKFSPDRQYLASGGEDGVVRIWRVASTDASGSYFNSKD-TSKLVHKVRGRNLIPG 276
            GFI TMKFSPD QYLA+GGED ++R+WRV   D+S   F S+      + + +  NL   
Sbjct: 215  GFIWTMKFSPDGQYLATGGEDRIIRVWRVTLVDSSCKSFPSEGHCDSNLKEAKSNNLSTK 274

Query: 275  RKCSKPAPVVIPQKIFQIDESPLHVFYGHTDDVLDLCWSNSNCLLSASKDGTVRLWQVGS 96
            ++    + VVIP+K+FQI+E+PL  F+GH  ++LDL WS+SN LLS+S D TVRLW++G 
Sbjct: 275  KRMY--SSVVIPEKVFQIEETPLQEFHGHASEILDLAWSDSNHLLSSSMDKTVRLWRLGC 332

Query: 95   NECLQVFKHNNYVTCIQFNPVNDGYFISGSI 3
            N  L +F+H+NYVTCIQFNPV+  YFISGSI
Sbjct: 333  NHSLNIFRHSNYVTCIQFNPVDKNYFISGSI 363