BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00004343
         (1649 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002272104.1| PREDICTED: pentatricopeptide repeat-containi...   355   2e-95
ref|XP_004136798.1| PREDICTED: pentatricopeptide repeat-containi...   337   4e-90
ref|XP_002454838.1| hypothetical protein SORBIDRAFT_04g038280 [S...   251   3e-64
ref|NP_001144243.1| hypothetical protein [Zea mays] gi|195638968...   249   1e-63
ref|NP_001048609.1| Os02g0829800 [Oryza sativa Japonica Group] g...   245   2e-62

>ref|XP_002272104.1| PREDICTED: pentatricopeptide repeat-containing protein At1g61870,
            mitochondrial [Vitis vinifera]
            gi|297738261|emb|CBI27462.3| unnamed protein product
            [Vitis vinifera]
          Length = 386

 Score =  355 bits (911), Expect = 2e-95
 Identities = 182/375 (48%), Positives = 256/375 (68%), Gaps = 1/375 (0%)
 Frame = +1

Query: 1    SSSSIPPTQYRKSKTLVRNETDPDKIAQVFLKTSDN-PRFYRDRSAFHISVRKLAKLQRF 177
            S+ S P T +  +K+ V +E DP+K+A +F   S N  RF R R  + +S R+L++  R 
Sbjct: 18   STLSDPFTTFLAAKSAVESEPDPEKLAHIFHHQSSNFARFRRHRPLYQLSCRRLSRSGRL 77

Query: 178  DLVEKILEQQIETPLLKTEGFWIRIMMLYSHAKMLDQVIATFDRIAELDCNQTDKSMCAL 357
            DLVE++++ Q   P  +TEGFWIR++MLYS + M+D  + TF ++ +     T+KS+CA+
Sbjct: 78   DLVERLIDHQKTLPHPRTEGFWIRLIMLYSTSGMVDHALRTFHQMVQDRVQLTEKSLCAI 137

Query: 358  LSACLQNGRFDLVHQYFESVPAKTAVKPGVVAYNLLMRAYCDEKKIDSARSLLDKMESEK 537
            L+  L N   D +H  F ++P++  V PG  +Y+L+++A+C +K ++SAR LL KME+  
Sbjct: 138  LTVYLDNDLIDQLHTVFNTMPSEIGVSPGTKSYSLVLKAFCQQKDMESARKLLHKMEN-- 195

Query: 538  GIKPDVASYNVVLTGYLRNGEEEKFDKLFDELSNKGLEPNLVTYNLRIKWLCKKKDCDRA 717
               PD+ SYNV+L  Y  NG+  +FD++  E+ NKGLE +  TYN RI   CK K+  RA
Sbjct: 196  ---PDIGSYNVLLEAYSENGDGVEFDEILKEIKNKGLEHDCTTYNHRILRFCKNKESVRA 252

Query: 718  KEILQEMLAKGVKPNVNSYNAVIDGFCKIADFESAKKVFDVMNAGDESVKPNSDSYITLI 897
            K++L EM+AKGVKPN  SYN +I GFCK+ DFESA+KV   M A D  V P S SYITL 
Sbjct: 253  KKLLDEMVAKGVKPNSASYNMIIHGFCKVGDFESAQKVLGRMLA-DGYVAPCSISYITLF 311

Query: 898  RQLVQEKEFIQALDMCKECLQKKWVPPFTSMEGLVKGLVEISKADEAKEIVETMKKRLRG 1077
            + +V+E EF  AL+MCKE +++KWVPPF +M+GLVKGLVEISK + AKE+VE MKKRL+G
Sbjct: 312  QHMVKEGEFDSALNMCKEIIRRKWVPPFEAMDGLVKGLVEISKVEAAKEVVEKMKKRLKG 371

Query: 1078 SAPESWSKVEGLLPL 1122
            +A +SW   E  LPL
Sbjct: 372  NAADSWKTHEAALPL 386


>ref|XP_004136798.1| PREDICTED: pentatricopeptide repeat-containing protein At1g61870,
            mitochondrial-like [Cucumis sativus]
            gi|449494815|ref|XP_004159654.1| PREDICTED:
            pentatricopeptide repeat-containing protein At1g61870,
            mitochondrial-like [Cucumis sativus]
          Length = 405

 Score =  337 bits (865), Expect = 4e-90
 Identities = 167/375 (44%), Positives = 253/375 (67%), Gaps = 2/375 (0%)
 Frame = +1

Query: 4    SSSIPPTQYRKSKTLVRNETDPDKIAQVFLKTSDNPRFYRDRSAFHISVRKLAKLQRFDL 183
            +S  P    R +K+ + +++DPDK+AQ F++ S  P F R R  +H S+RKLA+ QRFDL
Sbjct: 32   TSDSPFPSLRAAKSAILSQSDPDKLAQSFIQASTLPSFCRYRPIYHQSIRKLARAQRFDL 91

Query: 184  VEKILEQQIETPLLKTEGFWIRIMMLYSHAKMLDQVIATFDR-IAELDCNQTDKSMCALL 360
            ++ I++   ++P   +EGFWIR++MLYS   M++Q +   D+ I    CN ++KS+CA+L
Sbjct: 92   IDVIIQSHHKSPSATSEGFWIRLIMLYSSVGMVNQALYILDQAILHKSCNLSEKSLCAIL 151

Query: 361  SACLQNGRFDLVHQYFESVPAKTAVKPGVVAYNLLMRAYCDEKKIDSARSLLDKM-ESEK 537
            S  L N   + VH+ F S+P K  V P  V++NL+++A+  +  + SAR+ +D++ + + 
Sbjct: 152  SVFLDNSMPEKVHEMFRSIPEKIGVTPTAVSHNLVLKAFVRQNDLPSARNWIDELCKDDA 211

Query: 538  GIKPDVASYNVVLTGYLRNGEEEKFDKLFDELSNKGLEPNLVTYNLRIKWLCKKKDCDRA 717
             + P++ S+ ++L  Y  NG+   FD++  E+S +GLE NL TYN RI  LCK K+C RA
Sbjct: 212  KVIPNIDSFTILLGAYWSNGDMIGFDEIEKEISKRGLEFNLATYNYRISRLCKNKECARA 271

Query: 718  KEILQEMLAKGVKPNVNSYNAVIDGFCKIADFESAKKVFDVMNAGDESVKPNSDSYITLI 897
            K+IL EM++KGVKPN +SY+++I G+C + D ESA K+   +   D  V P S  Y  LI
Sbjct: 272  KKILDEMISKGVKPNSSSYDSIIHGYCDVGDIESAMKILKGI-LEDGHVSPTSRIYYRLI 330

Query: 898  RQLVQEKEFIQALDMCKECLQKKWVPPFTSMEGLVKGLVEISKADEAKEIVETMKKRLRG 1077
            R +V+E EF  AL+ C+E ++++WVPPF +ME LV+GLV +SK +EAKE+VE MKKRL+G
Sbjct: 331  RSMVKEGEFEMALETCRETIKRRWVPPFEAMEALVRGLVAMSKVEEAKEVVEKMKKRLKG 390

Query: 1078 SAPESWSKVEGLLPL 1122
             A +SW K+E  LPL
Sbjct: 391  PAVDSWRKIEAALPL 405


>ref|XP_002454838.1| hypothetical protein SORBIDRAFT_04g038280 [Sorghum bicolor]
            gi|241934669|gb|EES07814.1| hypothetical protein
            SORBIDRAFT_04g038280 [Sorghum bicolor]
          Length = 419

 Score =  251 bits (642), Expect = 3e-64
 Identities = 142/378 (37%), Positives = 219/378 (57%), Gaps = 10/378 (2%)
 Frame = +1

Query: 19   PTQYRKSKTLVRNE-TDPDKIAQVFLKTSDNPRFYRDRSAFHISVRKLAKLQRFDLVEKI 195
            P    + K+ +R+  T PD +A +FL    +P F  DR  F +SV +LA   R DLV  +
Sbjct: 40   PADLSRLKSSIRDAATSPDALATLFLSGLPHPAFLADRPLFALSVHRLASAGRRDLVASV 99

Query: 196  LEQQIETPLLK---TEGFWIRIMMLYSHAKMLDQVIATFDRIAELDCNQTDKSMCALLSA 366
            L   + T L     +EGF +R++ LYS A M D  +  F  +       +D+++ ALLS 
Sbjct: 100  LSSSL-TALPSPHPSEGFLLRLISLYSAAGMPDHSLTVFRLVNP----PSDRALSALLST 154

Query: 367  CLQNGRFDLVHQYFESVPAKTAVKPGVVAYNLLMRAYCDEKKIDSARSLLDKMESEKGIK 546
               N  +D   + F ++PA+  +KPG+V++N+L++A      I +ARS  DKM    G++
Sbjct: 155  YHDNRLYDRAVRAFNTLPAELGIKPGLVSHNVLLKALVASGDIAAARSAFDKMPDTAGVQ 214

Query: 547  PDVASYNVVLTGYLRNGEEEKFDKLFDELS--NKGLEPNLVTYNLRIKWLCKKKDCDRAK 720
            PD+ S N +L GYL  G++  FD+L  E++  N+ L+PN+ TYNLR+  LC K+    A+
Sbjct: 215  PDIVSCNEILKGYLSTGDDAAFDQLVKEIAGPNRRLKPNVGTYNLRMAMLCSKERSFEAE 274

Query: 721  EILQEMLAKGVKPNVNSYNAVIDGFCKIADFESAKKVF----DVMNAGDESVKPNSDSYI 888
            E+L  M A GV PN  S+N VI G C   +  +A  +F    +V     + V PN ++YI
Sbjct: 275  ELLDAMGANGVPPNRASFNTVIKGLCNEGEVGAAMALFKRMPEVPRQKGKGVSPNFETYI 334

Query: 889  TLIRQLVQEKEFIQALDMCKECLQKKWVPPFTSMEGLVKGLVEISKADEAKEIVETMKKR 1068
             L+  LV +  F  AL++CKECL  KW PPF +++GLV+ L++  KA  A+E++  M+K 
Sbjct: 335  MLLEALVNKNLFDPALEVCKECLHNKWAPPFQAVKGLVESLLKSRKAKHAREVLMAMRKA 394

Query: 1069 LRGSAPESWSKVEGLLPL 1122
            ++G A + W+KVE   P+
Sbjct: 395  VKGDAKQEWTKVEAQFPM 412


>ref|NP_001144243.1| hypothetical protein [Zea mays] gi|195638968|gb|ACG38952.1|
            hypothetical protein [Zea mays]
            gi|413939592|gb|AFW74143.1| hypothetical protein
            ZEAMMB73_602318 [Zea mays]
          Length = 419

 Score =  249 bits (637), Expect = 1e-63
 Identities = 141/378 (37%), Positives = 220/378 (58%), Gaps = 10/378 (2%)
 Frame = +1

Query: 19   PTQYRKSKTLVRNE-TDPDKIAQVFLKTSDNPRFYRDRSAFHISVRKLAKLQRFDLVEKI 195
            P    + K+ +R+  T PD +A +FL    +P F  DR  F +SV +LA   R DLV  +
Sbjct: 40   PADLSRLKSSIRDAATTPDALATLFLSGLPHPAFLADRPLFALSVHRLASAGRRDLVASV 99

Query: 196  LEQQIETPLLK---TEGFWIRIMMLYSHAKMLDQVIATFDRIAELDCNQTDKSMCALLSA 366
            L   + T L     +EGF +R++ LYS A M D  +A F  +       +D+++ ALLSA
Sbjct: 100  LSSSL-TALPSPHPSEGFLLRLISLYSAAGMPDHSLAVFRLVKPA----SDRALSALLSA 154

Query: 367  CLQNGRFDLVHQYFESVPAKTAVKPGVVAYNLLMRAYCDEKKIDSARSLLDKMESEKGIK 546
               N  +D   + F ++PA+  +KPG+V++N+L++A      + +A +L D+M    G++
Sbjct: 155  YHDNRLYDRTVRAFNTLPAELGIKPGLVSHNVLLKALVASGDVAAAHTLFDEMPDTAGVQ 214

Query: 547  PDVASYNVVLTGYLRNGEEEKFDKLFDELSN--KGLEPNLVTYNLRIKWLCKKKDCDRAK 720
            PD+ S N +L GYL  G+ + FD+L  E++   + L+PN+ TYNLR+  LC K     A+
Sbjct: 215  PDIVSCNEILKGYLNAGDADAFDRLVKEIAGPKRRLKPNVGTYNLRMALLCSKMRSFEAE 274

Query: 721  EILQEMLAKGVKPNVNSYNAVIDGFCKIADFESAKKVF----DVMNAGDESVKPNSDSYI 888
            E+L  M A GV PN  S+N VI G C   +  +A  +F    +V     + V PN ++YI
Sbjct: 275  ELLDVMGANGVPPNRTSFNTVIKGLCNEGEVGAAMALFKRMPEVPRQHGKGVSPNFETYI 334

Query: 889  TLIRQLVQEKEFIQALDMCKECLQKKWVPPFTSMEGLVKGLVEISKADEAKEIVETMKKR 1068
             L+  LV++  F  AL++CKECL+ KW PPF +++GLV+GL++  KA  A+E+   M+K 
Sbjct: 335  MLLEALVKKNLFDPALEICKECLRNKWAPPFQAVKGLVQGLLKSRKAKHAREVFMAMRKA 394

Query: 1069 LRGSAPESWSKVEGLLPL 1122
            ++G A + W KVE   P+
Sbjct: 395  VKGDAKQEWIKVEAQFPM 412


>ref|NP_001048609.1| Os02g0829800 [Oryza sativa Japonica Group]
            gi|48716331|dbj|BAD22943.1| membrane-associated
            salt-inducible protein-like [Oryza sativa Japonica Group]
            gi|113538140|dbj|BAF10523.1| Os02g0829800 [Oryza sativa
            Japonica Group] gi|125584252|gb|EAZ25183.1| hypothetical
            protein OsJ_08983 [Oryza sativa Japonica Group]
            gi|215769058|dbj|BAH01287.1| unnamed protein product
            [Oryza sativa Japonica Group]
          Length = 423

 Score =  245 bits (626), Expect = 2e-62
 Identities = 142/380 (37%), Positives = 215/380 (56%), Gaps = 12/380 (3%)
 Frame = +1

Query: 4    SSSIPPTQYRKSKTLVRNETD-PDKIAQVFLKTSDNPRFYRDRSAFHISVRKLAKLQRFD 180
            S +  P      K  +R+    P+ +A +F+    +P F  DR  F +SV +LA   R D
Sbjct: 36   SQTQTPADLATLKNSIRSAAHTPEALADLFISGLSHPAFLADRPIFTLSVHRLASAGRRD 95

Query: 181  LVEKILEQQIETPLLK--TEGFWIRIMMLYSHAKMLDQVIATFDRIAELDCNQTDKSMCA 354
            LV  IL   + +      +EGF IR++ LYS A M D  ++TF  +       +D+++ A
Sbjct: 96   LVASILSSSLTSLPAPHPSEGFLIRLISLYSAAGMPDHSLSTFRIVTP----PSDRALSA 151

Query: 355  LLSACLQNGRFDLVHQYFESVPAKTAVKPGVVAYNLLMRAYCDEKKIDSARSLLDKMESE 534
            LLSA   N  +D   Q F ++PA+  +KP VV++N+L++++     + SAR+L D+M S+
Sbjct: 152  LLSAYHDNRLYDRAIQAFRTLPAELGIKPSVVSHNVLLKSFVASGDLASARALFDEMPSK 211

Query: 535  KGIKPDVASYNVVLTGYLRNGEEEKFDKLFDELSN-----KGLEPNLVTYNLRIKWLCKK 699
              ++PD+ S N +L GYL   +   FD+   + +      + L+PN+ TYNLR+  LC K
Sbjct: 212  ADVEPDIVSCNEILKGYLNAADYAAFDQFLKDNTTAAGGKRRLKPNVSTYNLRMASLCSK 271

Query: 700  KDCDRAKEILQEMLAKGVKPNVNSYNAVIDGFCKIADFESAKKVF----DVMNAGDESVK 867
                 A E+L  M AKGV PN  S+N VI G CK  +  +A  +F    +V     + V 
Sbjct: 272  GRSFEAAELLDAMEAKGVPPNRGSFNTVIQGLCKEGEVGAAVAIFKRMPEVPRPNGKGVL 331

Query: 868  PNSDSYITLIRQLVQEKEFIQALDMCKECLQKKWVPPFTSMEGLVKGLVEISKADEAKEI 1047
            PNS++YI L+  LV +  F  AL++ KECLQ KW PPF +++GL+KGL++  KA  AKE+
Sbjct: 332  PNSETYIMLLEGLVNKGVFAPALEVFKECLQNKWAPPFQAVQGLIKGLLKSRKAKHAKEV 391

Query: 1048 VETMKKRLRGSAPESWSKVE 1107
               M+K ++G A E W KVE
Sbjct: 392  AMAMRKVVKGDAKEEWKKVE 411