BLASTX nr result

ID: Coptis23_contig00004340 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00004340
         (788 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002269079.1| PREDICTED: phylloplanin [Vitis vinifera] gi|...   165   1e-38
ref|XP_002516941.1| Phylloplanin precursor, putative [Ricinus co...   143   4e-32
ref|XP_002315514.1| predicted protein [Populus trichocarpa] gi|2...   142   1e-31
ref|XP_004134491.1| PREDICTED: phylloplanin-like [Cucumis sativu...   121   2e-25
ref|XP_002883017.1| hypothetical protein ARALYDRAFT_318437 [Arab...   110   3e-22

>ref|XP_002269079.1| PREDICTED: phylloplanin [Vitis vinifera]
           gi|296083359|emb|CBI22995.3| unnamed protein product
           [Vitis vinifera]
          Length = 156

 Score =  165 bits (417), Expect = 1e-38
 Identities = 90/151 (59%), Positives = 103/151 (68%), Gaps = 2/151 (1%)
 Frame = +2

Query: 47  MALKCLFFVSLLVVGLATPLAKAQXXXXXXXXXXXXXXQGTVFCSTNGNTSVNGIATPVF 226
           MALK L F SLLV   A P+A+AQ              QG +FC+ NGN  VNG ATPVF
Sbjct: 1   MALKSLLFFSLLVAVAAAPVAEAQLGNIIGSILDLIRIQGNLFCTANGNMGVNGTATPVF 60

Query: 227 PNALVQMQCGTGNVVAASGRTNSLGIFSILLDPLQFLLSSILSNCKLVVNTPLSACNSAL 406
           PNA VQ+QCG GNV+ +S  TNS G+FSILLDPLQFLLSS+L+NC LVVNTPLS CNS L
Sbjct: 61  PNAPVQLQCGAGNVI-SSATTNSAGLFSILLDPLQFLLSSLLTNCNLVVNTPLSTCNSGL 119

Query: 407 --GGILSSPLQLIESTVSGLLRTINIIPLGF 493
              G L SPL+LI +T+ G L   NIIP  F
Sbjct: 120 PSSGALLSPLRLIGNTLQGPLHITNIIPANF 150


>ref|XP_002516941.1| Phylloplanin precursor, putative [Ricinus communis]
           gi|223544029|gb|EEF45555.1| Phylloplanin precursor,
           putative [Ricinus communis]
          Length = 152

 Score =  143 bits (361), Expect = 4e-32
 Identities = 79/151 (52%), Positives = 99/151 (65%), Gaps = 2/151 (1%)
 Frame = +2

Query: 47  MALKCLFFVSLLVVGLATPLAKAQXXXXXXXXXXXXXXQGTVFCSTNGNTSVNGIATPVF 226
           MALK    V  LV  +A  + +AQ              QGTVFC+ NGN   NG ATPVF
Sbjct: 1   MALKSFLLVFFLVAVMAATITEAQLGIVGGLLGLIRI-QGTVFCTANGNMGANGTATPVF 59

Query: 227 PNALVQMQCGTGNVVAASGRTNSLGIFSILLDPLQFLLSSILSNCKLVVNTPLSACNSAL 406
           PNA VQ+ CG+  +  A+  TN  GIFSI+LDPLQ+++SS+LS C L V TPLS C+S+L
Sbjct: 60  PNAQVQLMCGSQMISTAT--TNRFGIFSIVLDPLQYVVSSVLSGCFLKVGTPLSNCDSSL 117

Query: 407 --GGILSSPLQLIESTVSGLLRTINIIPLGF 493
             GG+L SPL+L+ ST+ G+LR INIIP GF
Sbjct: 118 PTGGLLQSPLELVGSTIVGILRVINIIPTGF 148


>ref|XP_002315514.1| predicted protein [Populus trichocarpa] gi|222864554|gb|EEF01685.1|
           predicted protein [Populus trichocarpa]
          Length = 156

 Score =  142 bits (357), Expect = 1e-31
 Identities = 88/157 (56%), Positives = 105/157 (66%), Gaps = 5/157 (3%)
 Frame = +2

Query: 47  MALKCLFFVSLLVVG-LATPLAKAQXXXXXXXXXXXXXXQGTVFCSTNGNTSVNGIATPV 223
           MA K   FVSL+    LA P+A+AQ              QGT+FC+ NGN   NG ATPV
Sbjct: 1   MAFKSFLFVSLVGAAILAAPVAEAQLGLIGGLLGLIRI-QGTLFCTANGNMGANGTATPV 59

Query: 224 FPNALVQMQCGTGNVVAASGRTNSLGIFSILLDPLQFLLSSILSNCKLVVNTPLSACNS- 400
           FPNALVQ+QCG GNVV+ S  TN  GIFSILLDPL ++LSS+L+NC L V+TPL++CNS 
Sbjct: 60  FPNALVQLQCG-GNVVSTS-TTNGSGIFSILLDPLNYILSSLLTNCNLKVDTPLTSCNSS 117

Query: 401 --ALGGILSSPLQLIESTVSG-LLRTINIIPLGFNLI 502
             ALGG+LSS LQ I +T  G LL   NIIP GF  +
Sbjct: 118 LPALGGLLSS-LQFIGNTPLGALLSVANIIPAGFRFL 153


>ref|XP_004134491.1| PREDICTED: phylloplanin-like [Cucumis sativus]
           gi|449522899|ref|XP_004168463.1| PREDICTED:
           phylloplanin-like [Cucumis sativus]
          Length = 148

 Score =  121 bits (304), Expect = 2e-25
 Identities = 63/117 (53%), Positives = 84/117 (71%), Gaps = 3/117 (2%)
 Frame = +2

Query: 161 QGTVFCSTNGNTSVNGIATPVFPNALVQMQCGTGNVVAASGRTNSLGIFSILLDPLQFLL 340
           QGTVFC+ +GN   N  +TPVFPNALVQ+QCG GN+V+ +  TN+ GIFS+ L+P+QF+L
Sbjct: 30  QGTVFCTADGNIGTNATSTPVFPNALVQLQCGNGNIVSTT-TTNNGGIFSMFLNPVQFVL 88

Query: 341 SSILSNCKLVVNTPLSACNSAL--GGILSSPLQLIESTV-SGLLRTINIIPLGFNLI 502
           SS+LSNC LVV TP+S CN+ L   G L+S LQ + S V  GL++ + + P  F  I
Sbjct: 89  SSLLSNCNLVVKTPISDCNATLPSTGFLTSSLQFLGSFVQDGLMQIMKVAPNPFTFI 145


>ref|XP_002883017.1| hypothetical protein ARALYDRAFT_318437 [Arabidopsis lyrata subsp.
           lyrata] gi|297328857|gb|EFH59276.1| hypothetical protein
           ARALYDRAFT_318437 [Arabidopsis lyrata subsp. lyrata]
          Length = 185

 Score =  110 bits (276), Expect = 3e-22
 Identities = 58/116 (50%), Positives = 82/116 (70%), Gaps = 2/116 (1%)
 Frame = +2

Query: 164 GTVFCSTNGNTSVNGIATPVFPNALVQMQCGTGNVVAASGRTNSLGIFSILLDPLQFLLS 343
           G VFCS NG  ++NG +TP F NA VQ+QCG  N V ++  TN+ G+F++  D +Q LLS
Sbjct: 72  GVVFCSLNG--ALNGTSTPAFANAGVQLQCGRQNRVVSTATTNAAGLFTLPTDTIQMLLS 129

Query: 344 SILSNCKLVVNTPLSACNSALG--GILSSPLQLIESTVSGLLRTINIIPLGFNLIT 505
           ++LS+C++VV TPLS CN+ L   G L S L +I ++++GLL  I+IIP GF L+T
Sbjct: 130 TLLSDCRVVVTTPLSTCNANLPSVGNLVSRLAMIGNSLTGLLNIISIIPAGFGLLT 185


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