BLASTX nr result

ID: Coptis23_contig00004330 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00004330
         (901 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002267713.2| PREDICTED: uncharacterized protein LOC100258...   154   2e-35
ref|XP_002311854.1| predicted protein [Populus trichocarpa] gi|2...   137   4e-30
ref|XP_003613430.1| hypothetical protein MTR_5g036560 [Medicago ...   130   3e-28
ref|XP_002311790.1| predicted protein [Populus trichocarpa] gi|2...   130   5e-28
ref|XP_002520203.1| conserved hypothetical protein [Ricinus comm...   129   1e-27

>ref|XP_002267713.2| PREDICTED: uncharacterized protein LOC100258808 [Vitis vinifera]
           gi|296086485|emb|CBI32074.3| unnamed protein product
           [Vitis vinifera]
          Length = 513

 Score =  154 bits (390), Expect = 2e-35
 Identities = 89/208 (42%), Positives = 118/208 (56%), Gaps = 5/208 (2%)
 Frame = -3

Query: 809 MGEMMAETLRNEFEIEKPIASDPRFKQSVSFGRFENDL-LSWERWSSFSQNKYLEEVEKC 633
           MGE +   L++E ++ +  ASD   + SVSFGRFEND  LSWE+WSSFS NKYLEEVEKC
Sbjct: 1   MGESIVGALKDENKMGESAASDDVLEASVSFGRFENDSSLSWEKWSSFSPNKYLEEVEKC 60

Query: 632 STPGSVAMKKAYFEAHYKKIAARKVEIMEEEQRMGEDLFRSDIPCKENSINNDYGTKVEF 453
           STPGSVA KKAYFEAHYKKIAARK E+++ E++MG D   SD P   + I N  G   EF
Sbjct: 61  STPGSVAQKKAYFEAHYKKIAARKAELLDLEKQMGTDPLGSDDPNCGDQIRNTDGNNTEF 120

Query: 452 GTLGVNGITCSMEPDKNLLATTYCTLTEEPNQDRSG----VNRQXXXXXXXXXXGDDLPD 285
                      ++ D NL++    T  +EP++   G    +  Q           D    
Sbjct: 121 DVSNGQSSAEGVDQDTNLISVVTTTHVDEPSESNEGAPITIECQSSSVEEAEEELDSKQG 180

Query: 284 SPKSSEFEGAVLVSDENQYVEPQAQLEV 201
           +PK  + E  V + +E   +  Q  +E+
Sbjct: 181 TPKLKDGEETVSIKEEASPMGSQNVMEL 208


>ref|XP_002311854.1| predicted protein [Populus trichocarpa] gi|222851674|gb|EEE89221.1|
           predicted protein [Populus trichocarpa]
          Length = 566

 Score =  137 bits (344), Expect = 4e-30
 Identities = 67/119 (56%), Positives = 89/119 (74%), Gaps = 6/119 (5%)
 Frame = -3

Query: 809 MGEMMAETLRNEFEIEKPIASDPRFKQSVSFGRFENDLLSWERWSSFSQNKYLEEVEKCS 630
           MGE +      E +I   +ASDP  + SVSFGRFEND LSW++WSSFSQNKYLEEVEKC+
Sbjct: 1   MGESLVAASSYEDKIGGTVASDPALQASVSFGRFENDSLSWDKWSSFSQNKYLEEVEKCA 60

Query: 629 TPGSVAMKKAYFEAHYKKIAARKVEIMEEEQRMGEDLFRS------DIPCKENSINNDY 471
           TPGSVA K+AYFEAHYKKIAARK E++++E+++  DL R+      D+  K + +++D+
Sbjct: 61  TPGSVAEKRAYFEAHYKKIAARKAELLDQEKQIEHDLSRANNQNSGDLIVKTSQMDSDF 119


>ref|XP_003613430.1| hypothetical protein MTR_5g036560 [Medicago truncatula]
           gi|355514765|gb|AES96388.1| hypothetical protein
           MTR_5g036560 [Medicago truncatula]
          Length = 683

 Score =  130 bits (328), Expect = 3e-28
 Identities = 70/122 (57%), Positives = 83/122 (68%), Gaps = 6/122 (4%)
 Frame = -3

Query: 752 ASDPRFKQSVSFGRFENDLLSWERWSSFSQNKYLEEVEKCSTPGSVAMKKAYFEAHYKKI 573
           AS+   + SVSFGRF+ND LSWERWSSFS NKYLEEVEKC+TPGSVA KKAYFEAHYKKI
Sbjct: 180 ASNSALQVSVSFGRFDNDSLSWERWSSFSPNKYLEEVEKCATPGSVAQKKAYFEAHYKKI 239

Query: 572 AARKVEIMEEEQRMGEDLFRS------DIPCKENSINNDYGTKVEFGTLGVNGITCSMEP 411
           AARK E++ +E+ M  + FRS      D+    N  +N   T  EFG     G +C  E 
Sbjct: 240 AARKAELLAQEKEMERESFRSEENNGIDLSGNGNGNSNACETDSEFGISNTQG-SCVEER 298

Query: 410 DK 405
           D+
Sbjct: 299 DE 300


>ref|XP_002311790.1| predicted protein [Populus trichocarpa] gi|222851610|gb|EEE89157.1|
           predicted protein [Populus trichocarpa]
          Length = 513

 Score =  130 bits (326), Expect = 5e-28
 Identities = 63/93 (67%), Positives = 74/93 (79%)
 Frame = -3

Query: 809 MGEMMAETLRNEFEIEKPIASDPRFKQSVSFGRFENDLLSWERWSSFSQNKYLEEVEKCS 630
           MGE +      E +I    ASDP  + SVSFGRFEND LSWE+WSSFSQNKYLEEVEKC+
Sbjct: 1   MGESIVAASSYEDKIGGTAASDPALQVSVSFGRFENDSLSWEKWSSFSQNKYLEEVEKCA 60

Query: 629 TPGSVAMKKAYFEAHYKKIAARKVEIMEEEQRM 531
           +PGSVA KKAYFEAHYKKIAARK E+ ++E++M
Sbjct: 61  SPGSVAEKKAYFEAHYKKIAARKAELFDQEKQM 93


>ref|XP_002520203.1| conserved hypothetical protein [Ricinus communis]
           gi|223540695|gb|EEF42258.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 556

 Score =  129 bits (323), Expect = 1e-27
 Identities = 72/152 (47%), Positives = 91/152 (59%)
 Frame = -3

Query: 809 MGEMMAETLRNEFEIEKPIASDPRFKQSVSFGRFENDLLSWERWSSFSQNKYLEEVEKCS 630
           MGE +  T  +E ++ +   SD   + SVSFGRFEND LSWE+WSSFS NKYLEEVEKC+
Sbjct: 1   MGESIVATSYDEDKMGETATSDRSLEVSVSFGRFENDSLSWEKWSSFSPNKYLEEVEKCA 60

Query: 629 TPGSVAMKKAYFEAHYKKIAARKVEIMEEEQRMGEDLFRSDIPCKENSINNDYGTKVEFG 450
           TPGSVAMKKAYFEAHYKKIAA+K E + +E++M      S+     + I    G   EF 
Sbjct: 61  TPGSVAMKKAYFEAHYKKIAAKKAEQLGQEKQMEHKPLGSNDQNGGDPIGKANGIDSEFD 120

Query: 449 TLGVNGITCSMEPDKNLLATTYCTLTEEPNQD 354
           T      +     +  L +     L  EP +D
Sbjct: 121 TFNTQTSSEGTRQEIKLDSELDSGLVNEPYED 152


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