BLASTX nr result
ID: Coptis23_contig00004326
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Coptis23_contig00004326
(414 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|NP_001061550.1| Os08g0326400 [Oryza sativa Japonica Group] g... 139 2e-31
ref|NP_001148801.1| LOC100282418 [Zea mays] gi|195622244|gb|ACG3... 138 4e-31
ref|NP_001147139.1| 60S ribosomal protein L7a [Zea mays] gi|1946... 138 4e-31
ref|XP_003578397.1| PREDICTED: 60S ribosomal protein L7a-like [B... 137 7e-31
ref|XP_002462637.1| hypothetical protein SORBIDRAFT_02g029380 [S... 136 2e-30
>ref|NP_001061550.1| Os08g0326400 [Oryza sativa Japonica Group]
gi|115480049|ref|NP_001063618.1| Os09g0507800 [Oryza
sativa Japonica Group] gi|548774|sp|P35685.1|RL7A_ORYSJ
RecName: Full=60S ribosomal protein L7a
gi|315113253|pdb|3IZR|H Chain H, Localization Of The
Large Subunit Ribosomal Proteins Into A 5.5 A Cryo-Em
Map Of Triticum Aestivum Translating 80s Ribosome
gi|303855|dbj|BAA02156.1| ribosomal protein L7A [Oryza
sativa Japonica Group] gi|38423963|dbj|BAD01672.1| 60S
ribosomal protein L7A [Oryza sativa Japonica Group]
gi|38637005|dbj|BAD03264.1| 60S ribosomal protein L7A
[Oryza sativa Japonica Group]
gi|113623519|dbj|BAF23464.1| Os08g0326400 [Oryza sativa
Japonica Group] gi|113631851|dbj|BAF25532.1|
Os09g0507800 [Oryza sativa Japonica Group]
gi|125564310|gb|EAZ09690.1| hypothetical protein
OsI_31973 [Oryza sativa Indica Group]
gi|125606274|gb|EAZ45310.1| hypothetical protein
OsJ_29953 [Oryza sativa Japonica Group]
gi|215692651|dbj|BAG88071.1| unnamed protein product
[Oryza sativa Japonica Group]
gi|215692800|dbj|BAG88244.1| unnamed protein product
[Oryza sativa Japonica Group]
gi|215768136|dbj|BAH00365.1| unnamed protein product
[Oryza sativa Japonica Group]
gi|218200951|gb|EEC83378.1| hypothetical protein
OsI_28791 [Oryza sativa Indica Group]
Length = 258
Score = 139 bits (351), Expect = 2e-31
Identities = 70/89 (78%), Positives = 71/89 (79%)
Frame = -1
Query: 267 EKVTNPLFEKRAKQFGIGGALPPKKDLHRFVKWPXXXXXXXXXXXXXXXXXVPPALNQFT 88
EKVTNPLFEKR KQFGIGGALPPKKDLHRFVKWP VPPALNQFT
Sbjct: 18 EKVTNPLFEKRPKQFGIGGALPPKKDLHRFVKWPKVVRIQRQRRILKQRLKVPPALNQFT 77
Query: 87 KTLDKNLATNLFKMLLKYRPEDKAAKKER 1
+TLDKNLATNLFKMLLKYRPEDKAAKKER
Sbjct: 78 RTLDKNLATNLFKMLLKYRPEDKAAKKER 106
>ref|NP_001148801.1| LOC100282418 [Zea mays] gi|195622244|gb|ACG32952.1| 60S ribosomal
protein L7a [Zea mays] gi|219887097|gb|ACL53923.1|
unknown [Zea mays] gi|414886143|tpg|DAA62157.1| TPA: 60S
ribosomal protein L7a [Zea mays]
Length = 258
Score = 138 bits (348), Expect = 4e-31
Identities = 69/89 (77%), Positives = 71/89 (79%)
Frame = -1
Query: 267 EKVTNPLFEKRAKQFGIGGALPPKKDLHRFVKWPXXXXXXXXXXXXXXXXXVPPALNQFT 88
+KVTNPLFEKR KQFGIGGALPPKKDLHRFVKWP VPPALNQFT
Sbjct: 18 DKVTNPLFEKRPKQFGIGGALPPKKDLHRFVKWPKVVRIQRQRRILKQRLKVPPALNQFT 77
Query: 87 KTLDKNLATNLFKMLLKYRPEDKAAKKER 1
+TLDKNLATNLFKMLLKYRPEDKAAKKER
Sbjct: 78 RTLDKNLATNLFKMLLKYRPEDKAAKKER 106
>ref|NP_001147139.1| 60S ribosomal protein L7a [Zea mays] gi|194699752|gb|ACF83960.1|
unknown [Zea mays] gi|195607614|gb|ACG25637.1| 60S
ribosomal protein L7a [Zea mays]
gi|414589924|tpg|DAA40495.1| TPA: 60S ribosomal protein
L7a [Zea mays]
Length = 258
Score = 138 bits (348), Expect = 4e-31
Identities = 69/89 (77%), Positives = 71/89 (79%)
Frame = -1
Query: 267 EKVTNPLFEKRAKQFGIGGALPPKKDLHRFVKWPXXXXXXXXXXXXXXXXXVPPALNQFT 88
+KVTNPLFEKR KQFGIGGALPPKKDLHRFVKWP VPPALNQFT
Sbjct: 18 DKVTNPLFEKRPKQFGIGGALPPKKDLHRFVKWPKVVRIQRQRRILKQRLKVPPALNQFT 77
Query: 87 KTLDKNLATNLFKMLLKYRPEDKAAKKER 1
+TLDKNLATNLFKMLLKYRPEDKAAKKER
Sbjct: 78 RTLDKNLATNLFKMLLKYRPEDKAAKKER 106
>ref|XP_003578397.1| PREDICTED: 60S ribosomal protein L7a-like [Brachypodium distachyon]
gi|357166491|ref|XP_003580728.1| PREDICTED: 60S
ribosomal protein L7a-like [Brachypodium distachyon]
Length = 258
Score = 137 bits (346), Expect = 7e-31
Identities = 69/89 (77%), Positives = 71/89 (79%)
Frame = -1
Query: 267 EKVTNPLFEKRAKQFGIGGALPPKKDLHRFVKWPXXXXXXXXXXXXXXXXXVPPALNQFT 88
EKVTNPLFEKR KQFGIGGALPPKKDLHRFVKWP VPPAL+QFT
Sbjct: 18 EKVTNPLFEKRPKQFGIGGALPPKKDLHRFVKWPKVVRIQRQRRILKQRLKVPPALHQFT 77
Query: 87 KTLDKNLATNLFKMLLKYRPEDKAAKKER 1
+TLDKNLATNLFKMLLKYRPEDKAAKKER
Sbjct: 78 RTLDKNLATNLFKMLLKYRPEDKAAKKER 106
>ref|XP_002462637.1| hypothetical protein SORBIDRAFT_02g029380 [Sorghum bicolor]
gi|242049790|ref|XP_002462639.1| hypothetical protein
SORBIDRAFT_02g029400 [Sorghum bicolor]
gi|241926014|gb|EER99158.1| hypothetical protein
SORBIDRAFT_02g029380 [Sorghum bicolor]
gi|241926016|gb|EER99160.1| hypothetical protein
SORBIDRAFT_02g029400 [Sorghum bicolor]
Length = 258
Score = 136 bits (343), Expect = 2e-30
Identities = 68/89 (76%), Positives = 70/89 (78%)
Frame = -1
Query: 267 EKVTNPLFEKRAKQFGIGGALPPKKDLHRFVKWPXXXXXXXXXXXXXXXXXVPPALNQFT 88
+KV NPLFEKR KQFGIGGALPPKKDLHRFVKWP VPPALNQFT
Sbjct: 18 DKVVNPLFEKRPKQFGIGGALPPKKDLHRFVKWPKVVRIQRQRRILKQRLKVPPALNQFT 77
Query: 87 KTLDKNLATNLFKMLLKYRPEDKAAKKER 1
+TLDKNLATNLFKMLLKYRPEDKAAKKER
Sbjct: 78 RTLDKNLATNLFKMLLKYRPEDKAAKKER 106