BLASTX nr result

ID: Coptis23_contig00004321 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00004321
         (1287 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI28672.3| unnamed protein product [Vitis vinifera]              324   3e-86
ref|XP_002525477.1| conserved hypothetical protein [Ricinus comm...   281   2e-73
gb|ABK94232.1| unknown [Populus trichocarpa]                          273   5e-71
ref|XP_003631855.1| PREDICTED: uncharacterized protein LOC100252...   258   2e-66
gb|EAZ23155.1| hypothetical protein OsJ_06841 [Oryza sativa Japo...   248   2e-63

>emb|CBI28672.3| unnamed protein product [Vitis vinifera]
          Length = 413

 Score =  324 bits (831), Expect = 3e-86
 Identities = 162/366 (44%), Positives = 243/366 (66%), Gaps = 4/366 (1%)
 Frame = +1

Query: 73   RMIVYAKDSISRWFILPCTTDDDEIGDAQLPFSLKLQPFSL---EHSNGPKRMVLARCSG 243
            R IVYA  S+SRW ++  T D       Q P  + L+P SL   E   G K + L     
Sbjct: 53   RKIVYANHSLSRWCVVGLTDDK------QFPAYVGLEPTSLGSIERKTGEKPLTLV---D 103

Query: 244  DHSQKEKNEIASSFAKSPWITIVEKIQEDLLTSLQLARIEMCSDEPELIQPRFLVRFGKV 423
                KE ++   + +KSPW+ + E +Q+DLL+  +  R EM  +  E ++P    +FGK+
Sbjct: 104  SRRGKENSDAGGNISKSPWVYVAENVQQDLLSYFENVRNEMEVNNVEEVKPSLTAKFGKI 163

Query: 424  LFN-DSSINVDNIAKSSDVEKALSGINKRFYTNIPNSFAEALLGVVIPRIGVDFDKEEEF 600
            LF+ D S+  +++ K+   E  L  + ++FYTN+P+S+ + ++  V+P+IGV+F++E+E 
Sbjct: 164  LFHGDPSVGTESVRKNLVTEVKLRQLKRQFYTNVPSSYVKNIIDGVVPKIGVNFEEEKEL 223

Query: 601  YYVQVFDKHRPGATISCKCRIVEAAGELDLYKVALTQVRHLIVDISCVEKNQDLRLLLSS 780
            Y +++ D  RP +TISCKC + +   +L LYK+ L QVRHL++DISC++KN DLRL+LS+
Sbjct: 224  YQIKLSDITRPDSTISCKCSVTQDEKKLKLYKIELNQVRHLVIDISCLDKNLDLRLMLST 283

Query: 781  KRILTYLNDDEKHSLNNLIRYAVIDSEAKGGLRWPLGKESLGDRYTVVGVWHTKTKTFKS 960
            KRILT L DDEK S++NLI  A++D + KGGLRWP GKES GDRY+V+GVWH K K + +
Sbjct: 284  KRILTSLTDDEKQSISNLISSAILDPDVKGGLRWPFGKESSGDRYSVIGVWHIKAKAYTN 343

Query: 961  SCLKLKLKHADRFDFMTSIGEVTQEASLSTPELTRQLKDVTSELNPLTLTDMLRDTLKLI 1140
            S ++L+++ ADRFDF +S GEV +E +L    L  QL++   E+   +++D L+DTLKL+
Sbjct: 344  SSVRLRVRDADRFDFRSSAGEVAREITLKMTGLVSQLREQKVEVE--SVSDQLKDTLKLV 401

Query: 1141 WDHFLS 1158
            WDHFLS
Sbjct: 402  WDHFLS 407


>ref|XP_002525477.1| conserved hypothetical protein [Ricinus communis]
            gi|223535290|gb|EEF36967.1| conserved hypothetical
            protein [Ricinus communis]
          Length = 388

 Score =  281 bits (720), Expect = 2e-73
 Identities = 158/388 (40%), Positives = 236/388 (60%), Gaps = 5/388 (1%)
 Frame = +1

Query: 28   LVP--KTSGAKNKQPQGRMIVYAKDSISRWFILPCTTDDDEIGDAQLPFSLKLQPFSLE- 198
            LVP  K   + + + + R IVYA  +ISRWF +  T  D      Q P  + L+P SLE 
Sbjct: 24   LVPLFKKKLSLSNRNRSRKIVYADHAISRWFAVGLTDSD------QFPSHIHLKPVSLES 77

Query: 199  --HSNGPKRMVLARCSGDHSQKEKNEIASSFAKSPWITIVEKIQEDLLTSLQLARIEMCS 372
                +G K ++L      H  ++ +E+  +  ++PW+ I E IQ+DLL+S ++ R EM  
Sbjct: 78   FERQSGEKPLILVN---SHVNEDNSELRENCLRTPWLIIAENIQQDLLSSFEILRKEMHY 134

Query: 373  DEPELIQPRFLVRFGKVLFNDSSINVDNIAKSSDVEKALSGINKRFYTNIPNSFAEALLG 552
               E ++P  + RFGK+ F+        + +    E  L  + +  YTNIP S+ E ++ 
Sbjct: 135  HGLEKVKPILVARFGKICFH-------GVQEKQVNETILRQLKRSLYTNIPASYMENVID 187

Query: 553  VVIPRIGVDFDKEEEFYYVQVFDKHRPGATISCKCRIVEAAGELDLYKVALTQVRHLIVD 732
             VI  +GVDF++E++ Y+V++ D  RP + +SCKC  V     L  YK     VR ++ D
Sbjct: 188  EVILNVGVDFEEEKDIYHVKLSDNRRPDSIVSCKC-CVNTDKRLQFYKA----VRQMVAD 242

Query: 733  ISCVEKNQDLRLLLSSKRILTYLNDDEKHSLNNLIRYAVIDSEAKGGLRWPLGKESLGDR 912
            ISC++KN DLRL+L SKRILT   DDE  S+N+L+  AV+DS+ KGGLRWPLGK S G+R
Sbjct: 243  ISCLDKNLDLRLMLCSKRILTAPTDDEIKSINDLVSSAVLDSDVKGGLRWPLGKTSSGNR 302

Query: 913  YTVVGVWHTKTKTFKSSCLKLKLKHADRFDFMTSIGEVTQEASLSTPELTRQLKDVTSEL 1092
            Y+VVGVWHT  +++ SS L+LK++HADR DF +  GE T E  L    +  +L++  +E 
Sbjct: 303  YSVVGVWHTVARSYSSSSLRLKVRHADRCDFRSGTGEATMEIYLKLKGIVSELQEQGAES 362

Query: 1093 NPLTLTDMLRDTLKLIWDHFLS*ETLVT 1176
            +  ++++ML+D LKLIWD+FL  E ++T
Sbjct: 363  D--SVSNMLKDNLKLIWDNFLCCEPILT 388


>gb|ABK94232.1| unknown [Populus trichocarpa]
          Length = 437

 Score =  273 bits (699), Expect = 5e-71
 Identities = 156/384 (40%), Positives = 235/384 (61%), Gaps = 5/384 (1%)
 Frame = +1

Query: 40   TSGAKNKQPQGRMIVYAKDSISRWFILPCTTDDDEIGDAQLPFSLKLQPFSLEH---SNG 210
            ++  KNK  +   IVYA + I +WF +      DE  D Q P  + L+P S E+     G
Sbjct: 69   STSRKNKSGK---IVYADNPIFKWFAVGL----DE--DGQFPPYIHLEPISFEYVERKTG 119

Query: 211  PKRMVLARCSGDHSQKEKNEIASSFAKSPWITIVEKIQEDLLTSLQLARIEMCSDEPELI 390
             K +VL         +E   +  + ++SPW  I E +Q++LL+S ++ R EM     E I
Sbjct: 120  EKSLVLVNSI---VTEEDRTLERNCSRSPWEIIAENVQQELLSSFEILRNEMDDQGSEKI 176

Query: 391  QPRFLVRFGKVLFNDS-SINVDNIAKSSDVEKALSGINKRFYTNIPNSFAEALLGVVIPR 567
            +P  + RFGK  F    S+ ++++ K    E  L  ++K FYTNIP+S+ E ++  V+P 
Sbjct: 177  KPELVARFGKFAFRGKYSMGLESVDKIQVEEAILRQLDKSFYTNIPSSYMENIIDGVVPA 236

Query: 568  IGVDFDKEEEFYYVQVFDKHRPGATISCKCRIVEAAGELDLYKVALTQVRHLIVDISCVE 747
            IGVDF++E+E Y V++ D  RP AT+ CKC ++E   +L LYKV L +VR L++D+SC++
Sbjct: 237  IGVDFEEEKEVYTVKLSDNTRPDATVLCKCIVLEDK-KLHLYKVKLNKVRQLVIDVSCLD 295

Query: 748  KNQDLRLLLSSKRILTYLNDDEKHSLNNLIRYAVIDSEAKGGLRWPLGKE-SLGDRYTVV 924
            KN DLRL+L + RI+T L D+E +SL +LI  AV+DS+ KGGLRWPLG+E S   RY+V+
Sbjct: 296  KNLDLRLMLCTSRIVTALTDEEMNSLRDLINSAVLDSDMKGGLRWPLGEEASSCGRYSVI 355

Query: 925  GVWHTKTKTFKSSCLKLKLKHADRFDFMTSIGEVTQEASLSTPELTRQLKDVTSELNPLT 1104
            GVWHT TK +KSS  +LK + AD ++F T  GE  +E  L    +  ++++  +E +  +
Sbjct: 356  GVWHTVTKAYKSSSFRLKARDADGYNFKTGTGETLREIYLKLKRIVSEIQEPGAESD--S 413

Query: 1105 LTDMLRDTLKLIWDHFLS*ETLVT 1176
            ++ ML D+  LIWD FL  E  +T
Sbjct: 414  ISKMLEDSFSLIWDKFLCCERFLT 437


>ref|XP_003631855.1| PREDICTED: uncharacterized protein LOC100252715 [Vitis vinifera]
          Length = 258

 Score =  258 bits (660), Expect = 2e-66
 Identities = 124/260 (47%), Positives = 184/260 (70%), Gaps = 1/260 (0%)
 Frame = +1

Query: 382  ELIQPRFLVRFGKVLFN-DSSINVDNIAKSSDVEKALSGINKRFYTNIPNSFAEALLGVV 558
            E ++P    +FGK+LF+ D S+  +++ K+   E  L  + ++FYTN+P+S+ + ++  V
Sbjct: 7    EEVKPSLTAKFGKILFHGDPSVGTESVRKNLVTEVKLRQLKRQFYTNVPSSYVKNIIDGV 66

Query: 559  IPRIGVDFDKEEEFYYVQVFDKHRPGATISCKCRIVEAAGELDLYKVALTQVRHLIVDIS 738
            +P+IGV+F++E+E Y +++ D  RP +TISCKC I             L QVRHL++DIS
Sbjct: 67   VPKIGVNFEEEKELYQIKLSDITRPDSTISCKCSI------------ELNQVRHLVIDIS 114

Query: 739  CVEKNQDLRLLLSSKRILTYLNDDEKHSLNNLIRYAVIDSEAKGGLRWPLGKESLGDRYT 918
            C++KN DLRL+LS+KRILT L DDEK S++NLI  A++D + KGGLRWP GKES GDRY+
Sbjct: 115  CLDKNLDLRLMLSTKRILTSLTDDEKQSISNLISSAILDPDVKGGLRWPFGKESSGDRYS 174

Query: 919  VVGVWHTKTKTFKSSCLKLKLKHADRFDFMTSIGEVTQEASLSTPELTRQLKDVTSELNP 1098
            V+GVWH K K + +S ++L+++ ADRFDF +S GEV +E +L    L  QL++   E+  
Sbjct: 175  VIGVWHIKAKAYTNSSVRLRVRDADRFDFRSSAGEVAREITLKMTGLVSQLREQKVEVE- 233

Query: 1099 LTLTDMLRDTLKLIWDHFLS 1158
             +++D L+DTLKL+WDHFLS
Sbjct: 234  -SVSDQLKDTLKLVWDHFLS 252


>gb|EAZ23155.1| hypothetical protein OsJ_06841 [Oryza sativa Japonica Group]
          Length = 416

 Score =  248 bits (634), Expect = 2e-63
 Identities = 145/369 (39%), Positives = 218/369 (59%), Gaps = 9/369 (2%)
 Frame = +1

Query: 79   IVYAKDSISRWFILPCTTDDDEIGDAQLPFSLKLQPFS---LEHSNGPKRMVLARCSGDH 249
            IV+A   +SRW  LP   DDD   D     SL+L+PF    +E   G K + L   S   
Sbjct: 56   IVHAAGCVSRWSTLPPFPDDDGDDDG----SLRLEPFPCDPIERRTGAKPLALVSSSAAE 111

Query: 250  SQKEKNEIASSFAKSPWITIVEKIQEDLLTSLQLARIEMCSDEPELIQPRFLVRFGKVLF 429
            +    +  A++       T+ E+   DLL +   A+     +E E ++   + R GKVLF
Sbjct: 112  ASSPCSAAAAAS------TVTERFLPDLLAAAWRAKAGDVPEEEEEVKLSVVARVGKVLF 165

Query: 430  NDS------SINVDNIAKSSDVEKALSGINKRFYTNIPNSFAEALLGVVIPRIGVDFDKE 591
              S      S+N    A  +  E + S ++K FYTN+P+   + +      ++G++FD  
Sbjct: 166  ESSGGGSPVSMNSLREAVKAGEEGSRSNLHKSFYTNVPSECLDDMERSAAEKMGLEFDSS 225

Query: 592  EEFYYVQVFDKHRPGATISCKCRIVEAAGELDLYKVALTQVRHLIVDISCVEKNQDLRLL 771
            +E Y+V+VFDK +  +TI+CKC + E  G+L ++KV L QVRHL+ DISC+ K+ DLRL+
Sbjct: 226  KEHYHVKVFDKRQSDSTITCKCTVQED-GKLAIHKVQLNQVRHLVEDISCLFKDLDLRLM 284

Query: 772  LSSKRILTYLNDDEKHSLNNLIRYAVIDSEAKGGLRWPLGKESLGDRYTVVGVWHTKTKT 951
            LS+KRIL  L+ + K+++N L+  AVID + KGGLRWPLGKES+ +R+++VGVWHT  K 
Sbjct: 285  LSTKRILKNLDAEVKNAINCLVSSAVIDPDVKGGLRWPLGKESIDERFSIVGVWHTNYKA 344

Query: 952  FKSSCLKLKLKHADRFDFMTSIGEVTQEASLSTPELTRQLKDVTSELNPLTLTDMLRDTL 1131
            F++  L+LKL+HADRFD  +S GEV+ E +     ++  L+ V  E N  +L +ML   +
Sbjct: 345  FRNEKLRLKLRHADRFDHRSSTGEVSNEVTFKLIGISASLEAVDQEAN--SLQEMLESVV 402

Query: 1132 KLIWDHFLS 1158
             +IW+  LS
Sbjct: 403  GMIWESGLS 411


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