BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00004320
         (743 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN78081.1| hypothetical protein VITISV_021300 [Vitis vinifera]   353   3e-95
ref|XP_002275423.2| PREDICTED: pentatricopeptide repeat-containi...   351   8e-95
ref|XP_002523895.1| pentatricopeptide repeat-containing protein,...   339   3e-91
ref|XP_004143692.1| PREDICTED: pentatricopeptide repeat-containi...   328   9e-88
ref|XP_003591979.1| Pentatricopeptide repeat-containing protein ...   326   4e-87

>emb|CAN78081.1| hypothetical protein VITISV_021300 [Vitis vinifera]
          Length = 778

 Score =  353 bits (905), Expect = 3e-95
 Identities = 166/248 (66%), Positives = 208/248 (83%), Gaps = 2/248 (0%)
 Frame = -2

Query: 739  SPDCVTYNTLMHGYCKEGNMAAAYETMREMLRKGLKMDTFSLNTFLHVLCKEKKLDDAYE 560
            SPDCVTYNTL++GYCK GNM  A+ TM EM RK +KMD+ +LNT L  LC+EKKL++AY+
Sbjct: 415  SPDCVTYNTLINGYCKAGNMGEAFRTMDEMGRKNMKMDSVTLNTILRTLCREKKLEEAYK 474

Query: 559  LLHNAK--GYDPDEVSYGTLIMGYFKDEDVDRALKLWGEMKKKGILPSVVTYNSVIGGLF 386
            LL +A+  GY  DEVSYGTLI+GYFKD +VDRALKLW EMK+K I+PS VTYN +IGGL 
Sbjct: 475  LLSSARKRGYFIDEVSYGTLIVGYFKDGNVDRALKLWDEMKEKEIIPSTVTYNCIIGGLC 534

Query: 385  KSGKTEQAMAKLKELLESGLVPDKTTYSTLVHGYCWHGDMDKALEFHNQMVANSFKPDIT 206
            + GKTEQA++KL ELLESGL+PD+TTY+T++HGYC  GD++KA +FHN+MV NSFKPD+ 
Sbjct: 535  QCGKTEQAISKLNELLESGLLPDETTYNTILHGYCREGDVEKAFQFHNKMVENSFKPDVF 594

Query: 205  TCNILLHGLCSEKMVDKALKLFNMWLSKGKSVDAITYNTLITGLCIEGKIEAALELLTEM 26
            TCNILL GLC E M++KALKLFN W+SKGK++D +TYNTLIT LC EG+++ A  LL+EM
Sbjct: 595  TCNILLRGLCMEGMLEKALKLFNTWVSKGKAIDTVTYNTLITSLCKEGRLDDAFNLLSEM 654

Query: 25   QEKKLKPD 2
            +EK+L PD
Sbjct: 655  EEKELGPD 662



 Score =  166 bits (419), Expect = 6e-39
 Identities = 88/246 (35%), Positives = 141/246 (57%), Gaps = 2/246 (0%)
 Frame = -2

Query: 736  PDCVTYNTLMHGYCKEGNMAAAYETMREMLRKGLKMDTFSLNTFLHVLCKEKKLDDAYEL 557
            P+  TYN L++GYCK G +  A   +  M +  L  D ++ N  ++ LC E ++++A++L
Sbjct: 276  PNRNTYNILVYGYCKMGWLKEAANVIELMTQNNLLPDVWTYNMLINGLCNEGRIEEAFKL 335

Query: 556  LHNAKGYD--PDEVSYGTLIMGYFKDEDVDRALKLWGEMKKKGILPSVVTYNSVIGGLFK 383
                +     PD VSY TLI G  +   +  A KL  EM +KG+ P+ VT+N ++    K
Sbjct: 336  RDEMENLKLLPDVVSYNTLINGCLEWSKISEAFKLLEEMSEKGVKPNAVTHNIMVKWYCK 395

Query: 382  SGKTEQAMAKLKELLESGLVPDKTTYSTLVHGYCWHGDMDKALEFHNQMVANSFKPDITT 203
             GK + A   + ++ ESG  PD  TY+TL++GYC  G+M +A    ++M   + K D  T
Sbjct: 396  EGKMDDASNTITKMEESGFSPDCVTYNTLINGYCKAGNMGEAFRTMDEMGRKNMKMDSVT 455

Query: 202  CNILLHGLCSEKMVDKALKLFNMWLSKGKSVDAITYNTLITGLCIEGKIEAALELLTEMQ 23
             N +L  LC EK +++A KL +    +G  +D ++Y TLI G   +G ++ AL+L  EM+
Sbjct: 456  LNTILRTLCREKKLEEAYKLLSSARKRGYFIDEVSYGTLIVGYFKDGNVDRALKLWDEMK 515

Query: 22   EKKLKP 5
            EK++ P
Sbjct: 516  EKEIIP 521



 Score =  150 bits (380), Expect = 2e-34
 Identities = 83/247 (33%), Positives = 131/247 (53%), Gaps = 2/247 (0%)
 Frame = -2

Query: 736  PDCVTYNTLMHGYCKEGNMAAAYETMREMLRKGLKMDTFSLNTFLHVLCKEKKLDDAYEL 557
            PD V+YNTL++G  +   ++ A++ + EM  KG+K +  + N  +   CKE K+DDA   
Sbjct: 346  PDVVSYNTLINGCLEWSKISEAFKLLEEMSEKGVKPNAVTHNIMVKWYCKEGKMDDASNT 405

Query: 556  LHNAK--GYDPDEVSYGTLIMGYFKDEDVDRALKLWGEMKKKGILPSVVTYNSVIGGLFK 383
            +   +  G+ PD V+Y TLI GY K  ++  A +   EM +K +    VT N+++  L +
Sbjct: 406  ITKMEESGFSPDCVTYNTLINGYCKAGNMGEAFRTMDEMGRKNMKMDSVTLNTILRTLCR 465

Query: 382  SGKTEQAMAKLKELLESGLVPDKTTYSTLVHGYCWHGDMDKALEFHNQMVANSFKPDITT 203
              K E+A   L    + G   D+ +Y TL+ GY   G++D+AL+  ++M      P   T
Sbjct: 466  EKKLEEAYKLLSSARKRGYFIDEVSYGTLIVGYFKDGNVDRALKLWDEMKEKEIIPSTVT 525

Query: 202  CNILLHGLCSEKMVDKALKLFNMWLSKGKSVDAITYNTLITGLCIEGKIEAALELLTEMQ 23
             N ++ GLC     ++A+   N  L  G   D  TYNT++ G C EG +E A +   +M 
Sbjct: 526  YNCIIGGLCQCGKTEQAISKLNELLESGLLPDETTYNTILHGYCREGDVEKAFQFHNKMV 585

Query: 22   EKKLKPD 2
            E   KPD
Sbjct: 586  ENSFKPD 592



 Score =  137 bits (346), Expect = 2e-30
 Identities = 82/249 (32%), Positives = 122/249 (48%), Gaps = 2/249 (0%)
 Frame = -2

Query: 742 ISPDCVTYNTLMHGYCKEGNMAAAYETMREMLRKGLKMDTFSLNTFLHVLCKEKKLDDAY 563
           I P+  T+N +++GYC E     A E +  M +     D  + NT L  LCK+ +L DA 
Sbjct: 204 IVPNVNTFNIVIYGYCLENKFKDAVEFLNVMGKYNCSPDNVTYNTILDALCKKGRLGDAR 263

Query: 562 ELLHNAK--GYDPDEVSYGTLIMGYFKDEDVDRALKLWGEMKKKGILPSVVTYNSVIGGL 389
           +LL + K  G  P+  +Y  L+ GY K   +  A  +   M +  +LP V TYN +I GL
Sbjct: 264 DLLMDMKSRGLLPNRNTYNILVYGYCKMGWLKEAANVIELMTQNNLLPDVWTYNMLINGL 323

Query: 388 FKSGKTEQAMAKLKELLESGLVPDKTTYSTLVHGYCWHGDMDKALEFHNQMVANSFKPDI 209
              G+ E+A     E+    L+PD  +Y+TL++G      + +A +   +M     KP+ 
Sbjct: 324 CNEGRIEEAFKLRDEMENLKLLPDVVSYNTLINGCLEWSKISEAFKLLEEMSEKGVKPNA 383

Query: 208 TTCNILLHGLCSEKMVDKALKLFNMWLSKGKSVDAITYNTLITGLCIEGKIEAALELLTE 29
            T NI++   C E  +D A          G S D +TYNTLI G C  G +  A   + E
Sbjct: 384 VTHNIMVKWYCKEGKMDDASNTITKMEESGFSPDCVTYNTLINGYCKAGNMGEAFRTMDE 443

Query: 28  MQEKKLKPD 2
           M  K +K D
Sbjct: 444 MGRKNMKMD 452



 Score =  127 bits (319), Expect = 2e-27
 Identities = 71/252 (28%), Positives = 133/252 (52%), Gaps = 5/252 (1%)
 Frame = -2

Query: 742 ISPDCVTYNTLMHG---YCKEGNMAAAYETMREMLRKGLKMDTFSLNTFLHVLCKEKKLD 572
           + P+ +T NTL++    Y    +++ + E   + ++ G+  +  + N  ++  C E K  
Sbjct: 166 LRPNLLTCNTLLNSLVRYPSSHSVSFSREAFNDAIKLGIVPNVNTFNIVIYGYCLENKFK 225

Query: 571 DAYELLHNAKGYD--PDEVSYGTLIMGYFKDEDVDRALKLWGEMKKKGILPSVVTYNSVI 398
           DA E L+    Y+  PD V+Y T++    K   +  A  L  +MK +G+LP+  TYN ++
Sbjct: 226 DAVEFLNVMGKYNCSPDNVTYNTILDALCKKGRLGDARDLLMDMKSRGLLPNRNTYNILV 285

Query: 397 GGLFKSGKTEQAMAKLKELLESGLVPDKTTYSTLVHGYCWHGDMDKALEFHNQMVANSFK 218
            G  K G  ++A   ++ + ++ L+PD  TY+ L++G C  G +++A +  ++M      
Sbjct: 286 YGYCKMGWLKEAANVIELMTQNNLLPDVWTYNMLINGLCNEGRIEEAFKLRDEMENLKLL 345

Query: 217 PDITTCNILLHGLCSEKMVDKALKLFNMWLSKGKSVDAITYNTLITGLCIEGKIEAALEL 38
           PD+ + N L++G      + +A KL      KG   +A+T+N ++   C EGK++ A   
Sbjct: 346 PDVVSYNTLINGCLEWSKISEAFKLLEEMSEKGVKPNAVTHNIMVKWYCKEGKMDDASNT 405

Query: 37  LTEMQEKKLKPD 2
           +T+M+E    PD
Sbjct: 406 ITKMEESGFSPD 417



 Score =  103 bits (258), Expect = 3e-20
 Identities = 70/250 (28%), Positives = 114/250 (45%), Gaps = 3/250 (1%)
 Frame = -2

Query: 742  ISPDCVTYNTLMHGYCKEGNMAAAYETMREMLRKGLKMDTFSLNTFLHVLCKEKKLDDAY 563
            I P  VTYN ++ G C+ G    A   + E+L  GL  D  + NT LH  C+E  ++ A+
Sbjct: 519  IIPSTVTYNCIIGGLCQCGKTEQAISKLNELLESGLLPDETTYNTILHGYCREGDVEKAF 578

Query: 562  ELLHN---AKGYDPDEVSYGTLIMGYFKDEDVDRALKLWGEMKKKGILPSVVTYNSVIGG 392
            +  HN      + PD  +   L+ G   +  +++ALKL+     KG     VTYN++I  
Sbjct: 579  Q-FHNKMVENSFKPDVFTCNILLRGLCMEGMLEKALKLFNTWVSKGKAIDTVTYNTLITS 637

Query: 391  LFKSGKTEQAMAKLKELLESGLVPDKTTYSTLVHGYCWHGDMDKALEFHNQMVANSFKPD 212
            L K G+ + A   L E+ E  L PD  TY+ ++      G + +A EF ++M+     P 
Sbjct: 638  LCKEGRLDDAFNLLSEMEEKELGPDHYTYNAIITALTDSGRIREAEEFMSKMLEKGXLP- 696

Query: 211  ITTCNILLHGLCSEKMVDKALKLFNMWLSKGKSVDAITYNTLITGLCIEGKIEAALELLT 32
                            +D    +     S+     ++ Y+  I  LC EGK + A+ +  
Sbjct: 697  -----------XQVLQLDXNETVVTSETSEESDSSSVAYSEWIKELCTEGKYKDAMRIFG 745

Query: 31   EMQEKKLKPD 2
            E ++K +  D
Sbjct: 746  ESKQKGITVD 755


>ref|XP_002275423.2| PREDICTED: pentatricopeptide repeat-containing protein At2g16880-like
            [Vitis vinifera]
          Length = 778

 Score =  351 bits (901), Expect = 8e-95
 Identities = 165/248 (66%), Positives = 208/248 (83%), Gaps = 2/248 (0%)
 Frame = -2

Query: 739  SPDCVTYNTLMHGYCKEGNMAAAYETMREMLRKGLKMDTFSLNTFLHVLCKEKKLDDAYE 560
            SPDCVTYNTL++GYCK GNM  A+ TM EM RK +KMD+ +LNT L  LC+EKKL++AY+
Sbjct: 415  SPDCVTYNTLINGYCKAGNMGEAFRTMDEMGRKNMKMDSVTLNTILRTLCREKKLEEAYK 474

Query: 559  LLHNAK--GYDPDEVSYGTLIMGYFKDEDVDRALKLWGEMKKKGILPSVVTYNSVIGGLF 386
            LL +A+  GY  DEVSYGTLI+GYFKD +VDRALKLW EMK+K I+PS VTYN +IGGL 
Sbjct: 475  LLSSARKRGYFIDEVSYGTLIVGYFKDGNVDRALKLWDEMKEKEIIPSTVTYNCIIGGLC 534

Query: 385  KSGKTEQAMAKLKELLESGLVPDKTTYSTLVHGYCWHGDMDKALEFHNQMVANSFKPDIT 206
            + GKTEQA++KL ELLESGL+PD+TTY+T++HGYC  GD++KA +FHN+MV NSFKPD+ 
Sbjct: 535  QCGKTEQAISKLNELLESGLLPDETTYNTILHGYCREGDVEKAFQFHNKMVENSFKPDVF 594

Query: 205  TCNILLHGLCSEKMVDKALKLFNMWLSKGKSVDAITYNTLITGLCIEGKIEAALELLTEM 26
            TCNILL GLC E +++KALKLFN W+SKGK++D +TYNTLIT LC EG+++ A  LL+EM
Sbjct: 595  TCNILLRGLCMEGVLEKALKLFNTWVSKGKAIDTVTYNTLITSLCKEGRLDDAFNLLSEM 654

Query: 25   QEKKLKPD 2
            +EK+L PD
Sbjct: 655  EEKELGPD 662



 Score =  166 bits (419), Expect = 6e-39
 Identities = 88/246 (35%), Positives = 141/246 (57%), Gaps = 2/246 (0%)
 Frame = -2

Query: 736  PDCVTYNTLMHGYCKEGNMAAAYETMREMLRKGLKMDTFSLNTFLHVLCKEKKLDDAYEL 557
            P+  TYN L++GYCK G +  A   +  M +  L  D ++ N  ++ LC E ++++A++L
Sbjct: 276  PNRNTYNILVYGYCKMGWLKEAANVIELMTQNNLLPDVWTYNMLINGLCNEGRIEEAFKL 335

Query: 556  LHNAKGYD--PDEVSYGTLIMGYFKDEDVDRALKLWGEMKKKGILPSVVTYNSVIGGLFK 383
                +     PD VSY TLI G  +   +  A KL  EM +KG+ P+ VT+N ++    K
Sbjct: 336  RDEMENLKLLPDVVSYNTLINGCLEWSKISEAFKLLEEMSEKGVKPNAVTHNIMVKWYCK 395

Query: 382  SGKTEQAMAKLKELLESGLVPDKTTYSTLVHGYCWHGDMDKALEFHNQMVANSFKPDITT 203
             GK + A   + ++ ESG  PD  TY+TL++GYC  G+M +A    ++M   + K D  T
Sbjct: 396  EGKMDDASNTITKMEESGFSPDCVTYNTLINGYCKAGNMGEAFRTMDEMGRKNMKMDSVT 455

Query: 202  CNILLHGLCSEKMVDKALKLFNMWLSKGKSVDAITYNTLITGLCIEGKIEAALELLTEMQ 23
             N +L  LC EK +++A KL +    +G  +D ++Y TLI G   +G ++ AL+L  EM+
Sbjct: 456  LNTILRTLCREKKLEEAYKLLSSARKRGYFIDEVSYGTLIVGYFKDGNVDRALKLWDEMK 515

Query: 22   EKKLKP 5
            EK++ P
Sbjct: 516  EKEIIP 521



 Score =  150 bits (380), Expect = 2e-34
 Identities = 83/247 (33%), Positives = 131/247 (53%), Gaps = 2/247 (0%)
 Frame = -2

Query: 736  PDCVTYNTLMHGYCKEGNMAAAYETMREMLRKGLKMDTFSLNTFLHVLCKEKKLDDAYEL 557
            PD V+YNTL++G  +   ++ A++ + EM  KG+K +  + N  +   CKE K+DDA   
Sbjct: 346  PDVVSYNTLINGCLEWSKISEAFKLLEEMSEKGVKPNAVTHNIMVKWYCKEGKMDDASNT 405

Query: 556  LHNAK--GYDPDEVSYGTLIMGYFKDEDVDRALKLWGEMKKKGILPSVVTYNSVIGGLFK 383
            +   +  G+ PD V+Y TLI GY K  ++  A +   EM +K +    VT N+++  L +
Sbjct: 406  ITKMEESGFSPDCVTYNTLINGYCKAGNMGEAFRTMDEMGRKNMKMDSVTLNTILRTLCR 465

Query: 382  SGKTEQAMAKLKELLESGLVPDKTTYSTLVHGYCWHGDMDKALEFHNQMVANSFKPDITT 203
              K E+A   L    + G   D+ +Y TL+ GY   G++D+AL+  ++M      P   T
Sbjct: 466  EKKLEEAYKLLSSARKRGYFIDEVSYGTLIVGYFKDGNVDRALKLWDEMKEKEIIPSTVT 525

Query: 202  CNILLHGLCSEKMVDKALKLFNMWLSKGKSVDAITYNTLITGLCIEGKIEAALELLTEMQ 23
             N ++ GLC     ++A+   N  L  G   D  TYNT++ G C EG +E A +   +M 
Sbjct: 526  YNCIIGGLCQCGKTEQAISKLNELLESGLLPDETTYNTILHGYCREGDVEKAFQFHNKMV 585

Query: 22   EKKLKPD 2
            E   KPD
Sbjct: 586  ENSFKPD 592



 Score =  137 bits (346), Expect = 2e-30
 Identities = 82/249 (32%), Positives = 122/249 (48%), Gaps = 2/249 (0%)
 Frame = -2

Query: 742 ISPDCVTYNTLMHGYCKEGNMAAAYETMREMLRKGLKMDTFSLNTFLHVLCKEKKLDDAY 563
           I P+  T+N +++GYC E     A E +  M +     D  + NT L  LCK+ +L DA 
Sbjct: 204 IVPNVNTFNIVIYGYCLENKFKDAVEFLNVMGKYNCSPDNVTYNTILDTLCKKGRLGDAR 263

Query: 562 ELLHNAK--GYDPDEVSYGTLIMGYFKDEDVDRALKLWGEMKKKGILPSVVTYNSVIGGL 389
           +LL + K  G  P+  +Y  L+ GY K   +  A  +   M +  +LP V TYN +I GL
Sbjct: 264 DLLMDMKSRGLLPNRNTYNILVYGYCKMGWLKEAANVIELMTQNNLLPDVWTYNMLINGL 323

Query: 388 FKSGKTEQAMAKLKELLESGLVPDKTTYSTLVHGYCWHGDMDKALEFHNQMVANSFKPDI 209
              G+ E+A     E+    L+PD  +Y+TL++G      + +A +   +M     KP+ 
Sbjct: 324 CNEGRIEEAFKLRDEMENLKLLPDVVSYNTLINGCLEWSKISEAFKLLEEMSEKGVKPNA 383

Query: 208 TTCNILLHGLCSEKMVDKALKLFNMWLSKGKSVDAITYNTLITGLCIEGKIEAALELLTE 29
            T NI++   C E  +D A          G S D +TYNTLI G C  G +  A   + E
Sbjct: 384 VTHNIMVKWYCKEGKMDDASNTITKMEESGFSPDCVTYNTLINGYCKAGNMGEAFRTMDE 443

Query: 28  MQEKKLKPD 2
           M  K +K D
Sbjct: 444 MGRKNMKMD 452



 Score =  126 bits (317), Expect = 4e-27
 Identities = 71/252 (28%), Positives = 133/252 (52%), Gaps = 5/252 (1%)
 Frame = -2

Query: 742 ISPDCVTYNTLMHG---YCKEGNMAAAYETMREMLRKGLKMDTFSLNTFLHVLCKEKKLD 572
           + P+ +T NTL++    Y    +++ + E   + ++ G+  +  + N  ++  C E K  
Sbjct: 166 LRPNLLTCNTLLNSLVRYPSSHSVSFSREAFNDAIKLGIVPNVNTFNIVIYGYCLENKFK 225

Query: 571 DAYELLHNAKGYD--PDEVSYGTLIMGYFKDEDVDRALKLWGEMKKKGILPSVVTYNSVI 398
           DA E L+    Y+  PD V+Y T++    K   +  A  L  +MK +G+LP+  TYN ++
Sbjct: 226 DAVEFLNVMGKYNCSPDNVTYNTILDTLCKKGRLGDARDLLMDMKSRGLLPNRNTYNILV 285

Query: 397 GGLFKSGKTEQAMAKLKELLESGLVPDKTTYSTLVHGYCWHGDMDKALEFHNQMVANSFK 218
            G  K G  ++A   ++ + ++ L+PD  TY+ L++G C  G +++A +  ++M      
Sbjct: 286 YGYCKMGWLKEAANVIELMTQNNLLPDVWTYNMLINGLCNEGRIEEAFKLRDEMENLKLL 345

Query: 217 PDITTCNILLHGLCSEKMVDKALKLFNMWLSKGKSVDAITYNTLITGLCIEGKIEAALEL 38
           PD+ + N L++G      + +A KL      KG   +A+T+N ++   C EGK++ A   
Sbjct: 346 PDVVSYNTLINGCLEWSKISEAFKLLEEMSEKGVKPNAVTHNIMVKWYCKEGKMDDASNT 405

Query: 37  LTEMQEKKLKPD 2
           +T+M+E    PD
Sbjct: 406 ITKMEESGFSPD 417



 Score =  112 bits (281), Expect = 6e-23
 Identities = 74/269 (27%), Positives = 120/269 (44%), Gaps = 25/269 (9%)
 Frame = -2

Query: 733  DCVTYNTLMHGYCKEGNMAAAYETMREMLRKGLKMDTFSLNTFLHVLCKEKKLDDAYELL 554
            D V+Y TL+ GY K+GN+  A +   EM  K +   T + N  +  LC+  K + A   L
Sbjct: 487  DEVSYGTLIVGYFKDGNVDRALKLWDEMKEKEIIPSTVTYNCIIGGLCQCGKTEQAISKL 546

Query: 553  HNA--KGYDPDEVSYGTLIMGYFKDEDVDRALKLWGEMKKKGILPSVVTYNSVIGGLFKS 380
            +     G  PDE +Y T++ GY ++ DV++A +   +M +    P V T N ++ GL   
Sbjct: 547  NELLESGLLPDETTYNTILHGYCREGDVEKAFQFHNKMVENSFKPDVFTCNILLRGLCME 606

Query: 379  GKTEQAMAKLKELLESGLVPDKTTYSTLVHGYCWHGDMDKALEFHNQMVANSFKPDITTC 200
            G  E+A+      +  G   D  TY+TL+   C  G +D A    ++M      PD  T 
Sbjct: 607  GVLEKALKLFNTWVSKGKAIDTVTYNTLITSLCKEGRLDDAFNLLSEMEEKELGPDHYTY 666

Query: 199  NILLHGLCSEKMVDKALKLFNMWLSKGKSVD-----------------------AITYNT 89
            N ++  L     + +A +  +  L KG   D                       ++ Y+ 
Sbjct: 667  NAIITALTDSGRIREAEEFMSKMLEKGNLPDQVLQLDKNETVVTSETSEESDSSSVAYSE 726

Query: 88   LITGLCIEGKIEAALELLTEMQEKKLKPD 2
             I  LC EGK + A+ +  E ++K +  D
Sbjct: 727  WIKELCTEGKYKDAMRIFGESKQKGITVD 755



 Score = 57.0 bits (136), Expect = 4e-06
 Identities = 41/146 (28%), Positives = 64/146 (43%), Gaps = 25/146 (17%)
 Frame = -2

Query: 733  DCVTYNTLMHGYCKEGNMAAAYETMREMLRKGLKMDTFSLNTFLHVLCKEKKLDDAYELL 554
            D VTYNTL+   CKEG +  A+  + EM  K L  D ++ N  +  L    ++ +A E +
Sbjct: 627  DTVTYNTLITSLCKEGRLDDAFNLLSEMEEKELGPDHYTYNAIITALTDSGRIREAEEFM 686

Query: 553  HNA--KGYDPDEV-----------------------SYGTLIMGYFKDEDVDRALKLWGE 449
                 KG  PD+V                       +Y   I     +     A++++GE
Sbjct: 687  SKMLEKGNLPDQVLQLDKNETVVTSETSEESDSSSVAYSEWIKELCTEGKYKDAMRIFGE 746

Query: 448  MKKKGILPSVVTYNSVIGGLFKSGKT 371
             K+KGI     TY +++ GL K  K+
Sbjct: 747  SKQKGITVDKSTYINLMDGLIKRRKS 772


>ref|XP_002523895.1| pentatricopeptide repeat-containing protein, putative [Ricinus
            communis] gi|223536825|gb|EEF38464.1| pentatricopeptide
            repeat-containing protein, putative [Ricinus communis]
          Length = 784

 Score =  339 bits (870), Expect = 3e-91
 Identities = 160/248 (64%), Positives = 203/248 (81%), Gaps = 2/248 (0%)
 Frame = -2

Query: 739  SPDCVTYNTLMHGYCKEGNMAAAYETMREMLRKGLKMDTFSLNTFLHVLCKEKKLDDAYE 560
            SPDCVT+NTL++GYCK G ++ A+  M EM RKGLKM++ +LNT LH LC E+KLDDAY+
Sbjct: 419  SPDCVTFNTLINGYCKAGRLSEAFRMMDEMSRKGLKMNSVTLNTILHTLCGERKLDDAYK 478

Query: 559  LLHNA--KGYDPDEVSYGTLIMGYFKDEDVDRALKLWGEMKKKGILPSVVTYNSVIGGLF 386
            LL +A  +GY  DEVSYGTLIMGYFKD     A+KLW EMK+K I+PS++TYN++IGGL 
Sbjct: 479  LLSSASKRGYFVDEVSYGTLIMGYFKDGKSVEAMKLWDEMKEKEIIPSIITYNTMIGGLC 538

Query: 385  KSGKTEQAMAKLKELLESGLVPDKTTYSTLVHGYCWHGDMDKALEFHNQMVANSFKPDIT 206
             SGKT+Q++ KL ELLESGLVPD+TTY+T++ GYC  G ++KA +FHN+MV  SFKPD+ 
Sbjct: 539  HSGKTDQSIDKLNELLESGLVPDETTYNTIILGYCREGQVEKAFQFHNKMVKKSFKPDLF 598

Query: 205  TCNILLHGLCSEKMVDKALKLFNMWLSKGKSVDAITYNTLITGLCIEGKIEAALELLTEM 26
            TCNILL GLC+E M+DKALKLFN W+SKGK++DA+TYNT+I+GLC E + E A +LL EM
Sbjct: 599  TCNILLRGLCTEGMLDKALKLFNTWISKGKAIDAVTYNTIISGLCKEDRFEEAFDLLAEM 658

Query: 25   QEKKLKPD 2
            +EKKL PD
Sbjct: 659  EEKKLGPD 666



 Score =  158 bits (399), Expect = 1e-36
 Identities = 87/246 (35%), Positives = 138/246 (56%), Gaps = 2/246 (0%)
 Frame = -2

Query: 736  PDCVTYNTLMHGYCKEGNMAAAYETMREMLRKGLKMDTFSLNTFLHVLCKEKKLDDAYEL 557
            P+  T+N L+ GYCK G +  A + +  M +  +  D ++ N  +  LCK+ K+D+A+ L
Sbjct: 280  PNRNTFNILVSGYCKLGWLKEAAQVIDLMAQNNVLPDVWTYNMLIGGLCKDGKIDEAFRL 339

Query: 556  LHNAKGYD--PDEVSYGTLIMGYFKDEDVDRALKLWGEMKKKGILPSVVTYNSVIGGLFK 383
                +     PD V+Y TLI G F      +  +L  +M+ KG+ P+ VTYN V+    K
Sbjct: 340  KDEMENLKLLPDVVTYNTLINGCFDCSSSLKGFELIDKMEGKGVKPNAVTYNVVVKWYVK 399

Query: 382  SGKTEQAMAKLKELLESGLVPDKTTYSTLVHGYCWHGDMDKALEFHNQMVANSFKPDITT 203
             GK + A  +L+++ ESG  PD  T++TL++GYC  G + +A    ++M     K +  T
Sbjct: 400  EGKMDNAGNELRKMEESGFSPDCVTFNTLINGYCKAGRLSEAFRMMDEMSRKGLKMNSVT 459

Query: 202  CNILLHGLCSEKMVDKALKLFNMWLSKGKSVDAITYNTLITGLCIEGKIEAALELLTEMQ 23
             N +LH LC E+ +D A KL +    +G  VD ++Y TLI G   +GK   A++L  EM+
Sbjct: 460  LNTILHTLCGERKLDDAYKLLSSASKRGYFVDEVSYGTLIMGYFKDGKSVEAMKLWDEMK 519

Query: 22   EKKLKP 5
            EK++ P
Sbjct: 520  EKEIIP 525



 Score =  140 bits (352), Expect = 4e-31
 Identities = 81/247 (32%), Positives = 127/247 (51%), Gaps = 2/247 (0%)
 Frame = -2

Query: 736  PDCVTYNTLMHGYCKEGNMAAAYETMREMLRKGLKMDTFSLNTFLHVLCKEKKLDDAYEL 557
            PD VTYNTL++G     +    +E + +M  KG+K +  + N  +    KE K+D+A   
Sbjct: 350  PDVVTYNTLINGCFDCSSSLKGFELIDKMEGKGVKPNAVTYNVVVKWYVKEGKMDNAGNE 409

Query: 556  LHNAK--GYDPDEVSYGTLIMGYFKDEDVDRALKLWGEMKKKGILPSVVTYNSVIGGLFK 383
            L   +  G+ PD V++ TLI GY K   +  A ++  EM +KG+  + VT N+++  L  
Sbjct: 410  LRKMEESGFSPDCVTFNTLINGYCKAGRLSEAFRMMDEMSRKGLKMNSVTLNTILHTLCG 469

Query: 382  SGKTEQAMAKLKELLESGLVPDKTTYSTLVHGYCWHGDMDKALEFHNQMVANSFKPDITT 203
              K + A   L    + G   D+ +Y TL+ GY   G   +A++  ++M      P I T
Sbjct: 470  ERKLDDAYKLLSSASKRGYFVDEVSYGTLIMGYFKDGKSVEAMKLWDEMKEKEIIPSIIT 529

Query: 202  CNILLHGLCSEKMVDKALKLFNMWLSKGKSVDAITYNTLITGLCIEGKIEAALELLTEMQ 23
             N ++ GLC     D+++   N  L  G   D  TYNT+I G C EG++E A +   +M 
Sbjct: 530  YNTMIGGLCHSGKTDQSIDKLNELLESGLVPDETTYNTIILGYCREGQVEKAFQFHNKMV 589

Query: 22   EKKLKPD 2
            +K  KPD
Sbjct: 590  KKSFKPD 596



 Score =  120 bits (302), Expect = 2e-25
 Identities = 73/254 (28%), Positives = 133/254 (52%), Gaps = 7/254 (2%)
 Frame = -2

Query: 742 ISPDCVTYNTLMHGYCKEGNMAAAYET---MREMLRKGLKMDTFSLNTFLHVLCKEKKLD 572
           + P+ +T NTL++   +  +  + Y +     ++++ G+K++T + N  ++  C E KL 
Sbjct: 170 LKPNLLTCNTLINALVRYPSKPSVYLSKAIFSDVIKLGVKVNTNTFNILIYGCCIENKLS 229

Query: 571 DAYELLHNAKGYD--PDEVSYGTLIMGYFKDEDVDRALKLWGEMKKKGILPSVVTYNSVI 398
           +A  L+   K +   PD VSY T++    K   ++ A  L  +MK  G+LP+  T+N ++
Sbjct: 230 EAIGLIGKMKDFSCFPDNVSYNTILDVLCKKGKLNEARDLLLDMKNNGLLPNRNTFNILV 289

Query: 397 GGLFKSGKTEQAMAKLKELLESGLVPDKTTYSTLVHGYCWHGDMDKALEFHNQMVANSFK 218
            G  K G  ++A   +  + ++ ++PD  TY+ L+ G C  G +D+A    ++M      
Sbjct: 290 SGYCKLGWLKEAAQVIDLMAQNNVLPDVWTYNMLIGGLCKDGKIDEAFRLKDEMENLKLL 349

Query: 217 PDITTCNILLHGL--CSEKMVDKALKLFNMWLSKGKSVDAITYNTLITGLCIEGKIEAAL 44
           PD+ T N L++G   CS  +  K  +L +    KG   +A+TYN ++     EGK++ A 
Sbjct: 350 PDVVTYNTLINGCFDCSSSL--KGFELIDKMEGKGVKPNAVTYNVVVKWYVKEGKMDNAG 407

Query: 43  ELLTEMQEKKLKPD 2
             L +M+E    PD
Sbjct: 408 NELRKMEESGFSPD 421



 Score =  111 bits (277), Expect = 2e-22
 Identities = 69/264 (26%), Positives = 119/264 (45%), Gaps = 25/264 (9%)
 Frame = -2

Query: 733  DCVTYNTLMHGYCKEGNMAAAYETMREMLRKGLKMDTFSLNTFLHVLCKEKKLDDAYELL 554
            D V+Y TL+ GY K+G    A +   EM  K +     + NT +  LC   K D + + L
Sbjct: 491  DEVSYGTLIMGYFKDGKSVEAMKLWDEMKEKEIIPSIITYNTMIGGLCHSGKTDQSIDKL 550

Query: 553  HNA--KGYDPDEVSYGTLIMGYFKDEDVDRALKLWGEMKKKGILPSVVTYNSVIGGLFKS 380
            +     G  PDE +Y T+I+GY ++  V++A +   +M KK   P + T N ++ GL   
Sbjct: 551  NELLESGLVPDETTYNTIILGYCREGQVEKAFQFHNKMVKKSFKPDLFTCNILLRGLCTE 610

Query: 379  GKTEQAMAKLKELLESGLVPDKTTYSTLVHGYCWHGDMDKALEFHNQMVANSFKPDITTC 200
            G  ++A+      +  G   D  TY+T++ G C     ++A +   +M      PD  T 
Sbjct: 611  GMLDKALKLFNTWISKGKAIDAVTYNTIISGLCKEDRFEEAFDLLAEMEEKKLGPDCYTY 670

Query: 199  NILLHGLCSEKMVDKALKLFNMWLSKGKSVD-----------------------AITYNT 89
            N +L  L     + +A +  +  + +GK  D                       ++T++ 
Sbjct: 671  NAILSALADAGRMKEAEEFMSRIVEQGKLQDQTISLNKRKIESSSETSQESDPNSVTFSE 730

Query: 88   LITGLCIEGKIEAALELLTEMQEK 17
             I  LC +GK + A+ ++ E  +K
Sbjct: 731  QINELCTQGKYKDAMHMVQESTQK 754



 Score = 65.9 bits (159), Expect = 9e-09
 Identities = 45/175 (25%), Positives = 76/175 (43%), Gaps = 25/175 (14%)
 Frame = -2

Query: 736  PDCVTYNTLMHGYCKEGNMAAAYETMREMLRKGLKMDTFSLNTFLHVLCKEKKLDDAYEL 557
            PD  T N L+ G C EG +  A +     + KG  +D  + NT +  LCKE + ++A++L
Sbjct: 595  PDLFTCNILLRGLCTEGMLDKALKLFNTWISKGKAIDAVTYNTIISGLCKEDRFEEAFDL 654

Query: 556  LHNA--KGYDPDEVSYGTLIMGYFKDEDVDRALKLWGEMKKKGIL--------------- 428
            L     K   PD  +Y  ++        +  A +    + ++G L               
Sbjct: 655  LAEMEEKKLGPDCYTYNAILSALADAGRMKEAEEFMSRIVEQGKLQDQTISLNKRKIESS 714

Query: 427  --------PSVVTYNSVIGGLFKSGKTEQAMAKLKELLESGLVPDKTTYSTLVHG 287
                    P+ VT++  I  L   GK + AM  ++E  + G+   K+TY +L+ G
Sbjct: 715  SETSQESDPNSVTFSEQINELCTQGKYKDAMHMVQESTQKGITLHKSTYISLMEG 769


>ref|XP_004143692.1| PREDICTED: pentatricopeptide repeat-containing protein At2g16880-like
            [Cucumis sativus] gi|449529106|ref|XP_004171542.1|
            PREDICTED: pentatricopeptide repeat-containing protein
            At2g16880-like [Cucumis sativus]
          Length = 783

 Score =  328 bits (840), Expect = 9e-88
 Identities = 156/249 (62%), Positives = 196/249 (78%), Gaps = 2/249 (0%)
 Frame = -2

Query: 742  ISPDCVTYNTLMHGYCKEGNMAAAYETMREMLRKGLKMDTFSLNTFLHVLCKEKKLDDAY 563
            +SPDCVTYNTL+  YCK G M  A+  M EM  KGLK+DT++LNT LH LC EKKLD+AY
Sbjct: 419  LSPDCVTYNTLIGAYCKAGKMGKAFRMMDEMTSKGLKIDTWTLNTILHCLCVEKKLDEAY 478

Query: 562  ELLHNA--KGYDPDEVSYGTLIMGYFKDEDVDRALKLWGEMKKKGILPSVVTYNSVIGGL 389
             LL +A  +GY  DEVSYG LI+GYFKDE  DRAL LW EMK++ I+PS +TYNSVIGGL
Sbjct: 479  NLLCSASKRGYILDEVSYGILILGYFKDEKGDRALNLWDEMKERQIMPSTITYNSVIGGL 538

Query: 388  FKSGKTEQAMAKLKELLESGLVPDKTTYSTLVHGYCWHGDMDKALEFHNQMVANSFKPDI 209
             +S K +QA+ KL E+LE+GLVPD+TTY+ ++HG+C  G+++KA +FHN+M+ N FKPD+
Sbjct: 539  CQSRKVDQAIDKLNEMLENGLVPDETTYNIIIHGFCLEGNVEKAFQFHNEMIENLFKPDV 598

Query: 208  TTCNILLHGLCSEKMVDKALKLFNMWLSKGKSVDAITYNTLITGLCIEGKIEAALELLTE 29
             TCNILL GLC E M++KALKLFN  +SKGK +D +TYNT+I+ LC EGK E A +LLTE
Sbjct: 599  YTCNILLRGLCREGMLEKALKLFNTLVSKGKDIDVVTYNTIISSLCKEGKFENAYDLLTE 658

Query: 28   MQEKKLKPD 2
            M+ KKL PD
Sbjct: 659  MEAKKLGPD 667



 Score =  148 bits (374), Expect = 1e-33
 Identities = 85/248 (34%), Positives = 132/248 (53%), Gaps = 2/248 (0%)
 Frame = -2

Query: 742  ISPDCVTYNTLMHGYCKEGNMAAAYETMREMLRKGLKMDTFSLNTFLHVLCKEKKLDDAY 563
            +SP+  TYN L+ GYC+ G +  A + +  M R  L    ++ N  ++  C + K+D+A+
Sbjct: 279  LSPNKHTYNMLVCGYCRLGLLKEATKVIEIMTRNNLLPTVWTYNMLVNGFCNDGKIDEAF 338

Query: 562  ELLHNAKGYD--PDEVSYGTLIMGYFKDEDVDRALKLWGEMKKKGILPSVVTYNSVIGGL 389
             +    +  +  PD V+Y TLI G  +  D      L  EM KKG+  + VTYN ++  +
Sbjct: 339  RIRDEMEKMNVLPDVVTYNTLIDGCSQWRDSSEVYSLIEEMDKKGVKCNAVTYNIILKWM 398

Query: 388  FKSGKTEQAMAKLKELLESGLVPDKTTYSTLVHGYCWHGDMDKALEFHNQMVANSFKPDI 209
             K G   +A   L ++ E+GL PD  TY+TL+  YC  G M KA    ++M +   K D 
Sbjct: 399  CKKGNMTEATTTLDKMEENGLSPDCVTYNTLIGAYCKAGKMGKAFRMMDEMTSKGLKIDT 458

Query: 208  TTCNILLHGLCSEKMVDKALKLFNMWLSKGKSVDAITYNTLITGLCIEGKIEAALELLTE 29
             T N +LH LC EK +D+A  L      +G  +D ++Y  LI G   + K + AL L  E
Sbjct: 459  WTLNTILHCLCVEKKLDEAYNLLCSASKRGYILDEVSYGILILGYFKDEKGDRALNLWDE 518

Query: 28   MQEKKLKP 5
            M+E+++ P
Sbjct: 519  MKERQIMP 526



 Score =  139 bits (351), Expect = 5e-31
 Identities = 81/249 (32%), Positives = 124/249 (49%), Gaps = 2/249 (0%)
 Frame = -2

Query: 742  ISPDCVTYNTLMHGYCKEGNMAAAYETMREMLRKGLKMDTFSLNTFLHVLCKEKKLDDAY 563
            + PD VTYNTL+ G  +  + +  Y  + EM +KG+K +  + N  L  +CK+  + +A 
Sbjct: 349  VLPDVVTYNTLIDGCSQWRDSSEVYSLIEEMDKKGVKCNAVTYNIILKWMCKKGNMTEAT 408

Query: 562  ELLHNAK--GYDPDEVSYGTLIMGYFKDEDVDRALKLWGEMKKKGILPSVVTYNSVIGGL 389
              L   +  G  PD V+Y TLI  Y K   + +A ++  EM  KG+     T N+++  L
Sbjct: 409  TTLDKMEENGLSPDCVTYNTLIGAYCKAGKMGKAFRMMDEMTSKGLKIDTWTLNTILHCL 468

Query: 388  FKSGKTEQAMAKLKELLESGLVPDKTTYSTLVHGYCWHGDMDKALEFHNQMVANSFKPDI 209
                K ++A   L    + G + D+ +Y  L+ GY      D+AL   ++M      P  
Sbjct: 469  CVEKKLDEAYNLLCSASKRGYILDEVSYGILILGYFKDEKGDRALNLWDEMKERQIMPST 528

Query: 208  TTCNILLHGLCSEKMVDKALKLFNMWLSKGKSVDAITYNTLITGLCIEGKIEAALELLTE 29
             T N ++ GLC  + VD+A+   N  L  G   D  TYN +I G C+EG +E A +   E
Sbjct: 529  ITYNSVIGGLCQSRKVDQAIDKLNEMLENGLVPDETTYNIIIHGFCLEGNVEKAFQFHNE 588

Query: 28   MQEKKLKPD 2
            M E   KPD
Sbjct: 589  MIENLFKPD 597



 Score =  132 bits (333), Expect = 6e-29
 Identities = 78/249 (31%), Positives = 126/249 (50%), Gaps = 2/249 (0%)
 Frame = -2

Query: 742 ISPDCVTYNTLMHGYCKEGNMAAAYETMREMLRKGLKMDTFSLNTFLHVLCKEKKLDDAY 563
           + P+  ++N L++GYC E  +  A + + +M   G   DT S NT L  L K + L +A 
Sbjct: 209 VVPNTNSFNILIYGYCLESKVKDALDWVNKMSEFGCVPDTVSYNTILDALLKRRLLQEAR 268

Query: 562 ELLHN--AKGYDPDEVSYGTLIMGYFKDEDVDRALKLWGEMKKKGILPSVVTYNSVIGGL 389
           +LL +  +KG  P++ +Y  L+ GY +   +  A K+   M +  +LP+V TYN ++ G 
Sbjct: 269 DLLLDMKSKGLSPNKHTYNMLVCGYCRLGLLKEATKVIEIMTRNNLLPTVWTYNMLVNGF 328

Query: 388 FKSGKTEQAMAKLKELLESGLVPDKTTYSTLVHGYCWHGDMDKALEFHNQMVANSFKPDI 209
              GK ++A     E+ +  ++PD  TY+TL+ G     D  +      +M     K + 
Sbjct: 329 CNDGKIDEAFRIRDEMEKMNVLPDVVTYNTLIDGCSQWRDSSEVYSLIEEMDKKGVKCNA 388

Query: 208 TTCNILLHGLCSEKMVDKALKLFNMWLSKGKSVDAITYNTLITGLCIEGKIEAALELLTE 29
            T NI+L  +C +  + +A    +     G S D +TYNTLI   C  GK+  A  ++ E
Sbjct: 389 VTYNIILKWMCKKGNMTEATTTLDKMEENGLSPDCVTYNTLIGAYCKAGKMGKAFRMMDE 448

Query: 28  MQEKKLKPD 2
           M  K LK D
Sbjct: 449 MTSKGLKID 457



 Score =  124 bits (312), Expect = 2e-26
 Identities = 72/250 (28%), Positives = 128/250 (51%), Gaps = 5/250 (2%)
 Frame = -2

Query: 736 PDCVTYNTLMHG---YCKEGNMAAAYETMREMLRKGLKMDTFSLNTFLHVLCKEKKLDDA 566
           P+ +T NTLM+    Y    ++  A + +++ ++ G+  +T S N  ++  C E K+ DA
Sbjct: 173 PNLLTCNTLMNSLVRYPSSSSILLARQVLKDSIKLGVVPNTNSFNILIYGYCLESKVKDA 232

Query: 565 YELLHNAK--GYDPDEVSYGTLIMGYFKDEDVDRALKLWGEMKKKGILPSVVTYNSVIGG 392
            + ++     G  PD VSY T++    K   +  A  L  +MK KG+ P+  TYN ++ G
Sbjct: 233 LDWVNKMSEFGCVPDTVSYNTILDALLKRRLLQEARDLLLDMKSKGLSPNKHTYNMLVCG 292

Query: 391 LFKSGKTEQAMAKLKELLESGLVPDKTTYSTLVHGYCWHGDMDKALEFHNQMVANSFKPD 212
             + G  ++A   ++ +  + L+P   TY+ LV+G+C  G +D+A    ++M   +  PD
Sbjct: 293 YCRLGLLKEATKVIEIMTRNNLLPTVWTYNMLVNGFCNDGKIDEAFRIRDEMEKMNVLPD 352

Query: 211 ITTCNILLHGLCSEKMVDKALKLFNMWLSKGKSVDAITYNTLITGLCIEGKIEAALELLT 32
           + T N L+ G    +   +   L      KG   +A+TYN ++  +C +G +  A   L 
Sbjct: 353 VVTYNTLIDGCSQWRDSSEVYSLIEEMDKKGVKCNAVTYNIILKWMCKKGNMTEATTTLD 412

Query: 31  EMQEKKLKPD 2
           +M+E  L PD
Sbjct: 413 KMEENGLSPD 422



 Score = 99.0 bits (245), Expect = 9e-19
 Identities = 64/223 (28%), Positives = 107/223 (47%), Gaps = 2/223 (0%)
 Frame = -2

Query: 736  PDCVTYNTLMHGYCKEGNMAAAYETMREMLRKGLKMDTFSLNTFLHVLCKEKKLDDAYEL 557
            PD  TYN ++HG+C EGN+  A++   EM+    K D ++ N  L  LC+E  L+ A +L
Sbjct: 561  PDETTYNIIIHGFCLEGNVEKAFQFHNEMIENLFKPDVYTCNILLRGLCREGMLEKALKL 620

Query: 556  LHN--AKGYDPDEVSYGTLIMGYFKDEDVDRALKLWGEMKKKGILPSVVTYNSVIGGLFK 383
             +   +KG D D V+Y T+I    K+   + A  L  EM+ K + P   TY  +I  L  
Sbjct: 621  FNTLVSKGKDIDVVTYNTIISSLCKEGKFENAYDLLTEMEAKKLGPDQYTYKVIIAALTD 680

Query: 382  SGKTEQAMAKLKELLESGLVPDKTTYSTLVHGYCWHGDMDKALEFHNQMVANSFKPDITT 203
            +G+ ++A     +++ESG+V D+               + K        V+  F      
Sbjct: 681  AGRIKEAEEFTLKMVESGIVHDQNL------------KLGKGQNVLTSEVSEHFDFKSIA 728

Query: 202  CNILLHGLCSEKMVDKALKLFNMWLSKGKSVDAITYNTLITGL 74
             +  ++ LC++     A+ LF     +G +++  TY  L+ GL
Sbjct: 729  YSDQINELCNQHKYKDAMHLFVEVTKEGVALNKYTYLNLMEGL 771


>ref|XP_003591979.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
            gi|355481027|gb|AES62230.1| Pentatricopeptide
            repeat-containing protein [Medicago truncatula]
          Length = 873

 Score =  326 bits (835), Expect = 4e-87
 Identities = 152/248 (61%), Positives = 194/248 (78%), Gaps = 2/248 (0%)
 Frame = -2

Query: 739  SPDCVTYNTLMHGYCKEGNMAAAYETMREMLRKGLKMDTFSLNTFLHVLCKEKKLDDAYE 560
            SPDC TYNT+++GYCK G MA AY+ M EM RKGLK+DTF+LNT LH +C EK+LDDAY 
Sbjct: 418  SPDCFTYNTMINGYCKAGKMAEAYKMMDEMGRKGLKLDTFTLNTLLHTMCLEKQLDDAYT 477

Query: 559  LLHNAK--GYDPDEVSYGTLIMGYFKDEDVDRALKLWGEMKKKGILPSVVTYNSVIGGLF 386
            L   A+  GY  DEV+YGTLIMGYFKDE  DRALKLW EMK+ GI+ +++TYN++I GL 
Sbjct: 478  LTMKARKRGYILDEVTYGTLIMGYFKDEQADRALKLWEEMKETGIVATIITYNTIIRGLC 537

Query: 385  KSGKTEQAMAKLKELLESGLVPDKTTYSTLVHGYCWHGDMDKALEFHNQMVANSFKPDIT 206
             SGKT+QA+ KL ELLE GLVPD++T + ++HGYCW G ++KA +FHN+MV +S KPDI 
Sbjct: 538  LSGKTDQAVDKLNELLEKGLVPDESTSNIIIHGYCWEGAVEKAFQFHNKMVEHSLKPDIF 597

Query: 205  TCNILLHGLCSEKMVDKALKLFNMWLSKGKSVDAITYNTLITGLCIEGKIEAALELLTEM 26
            TCNILL GLC E M++K L LFN W+SKGK +D +TYN +I+  C E ++E A +L+TEM
Sbjct: 598  TCNILLRGLCREGMLEKGLTLFNTWISKGKPMDTVTYNIIISSFCKERRLEDAFDLMTEM 657

Query: 25   QEKKLKPD 2
            + K L+PD
Sbjct: 658  EGKNLEPD 665



 Score =  161 bits (407), Expect = 2e-37
 Identities = 99/282 (35%), Positives = 142/282 (50%), Gaps = 37/282 (13%)
 Frame = -2

Query: 736  PDCVTYNTLMHGYCKEGNMAAAYETMREMLRKGLKMDTFSLNTFLHVLCKEKKLDDAYEL 557
            P+  TYN L+HGYCK   +  A E +  M  KG+  D ++ NT +  LC E K+D+A  L
Sbjct: 279  PNRNTYNILVHGYCKLKWLKEAAEVIELMTGKGMLPDVWTYNTMVRGLCDEGKIDEAVRL 338

Query: 556  LHNAKGYD--PDEVSYGTLIMGYFKDEDVDRALKLWGEMKKKGILPSVVTYNSVIGGLFK 383
                + +   PD V+Y TLI G F+    D A KL  EMK +G+  + VT+N +I     
Sbjct: 339  RDKMESFKLVPDVVTYNTLIDGCFEHRGSDAAFKLVEEMKARGVKENGVTHNIMIKWFCT 398

Query: 382  SGKTEQAMAKLKELLESGLVPDKTTYSTLVHGYCWHGDMDKALEFHNQMVANSFKPDITT 203
             GK ++A   + +++ESG  PD  TY+T+++GYC  G M +A +  ++M     K D  T
Sbjct: 399  EGKIDEASNVMVKMVESGFSPDCFTYNTMINGYCKAGKMAEAYKMMDEMGRKGLKLDTFT 458

Query: 202  CNILLHGLCSEKMV-----------------------------------DKALKLFNMWL 128
             N LLH +C EK +                                   D+ALKL+    
Sbjct: 459  LNTLLHTMCLEKQLDDAYTLTMKARKRGYILDEVTYGTLIMGYFKDEQADRALKLWEEMK 518

Query: 127  SKGKSVDAITYNTLITGLCIEGKIEAALELLTEMQEKKLKPD 2
              G     ITYNT+I GLC+ GK + A++ L E+ EK L PD
Sbjct: 519  ETGIVATIITYNTIIRGLCLSGKTDQAVDKLNELLEKGLVPD 560



 Score =  149 bits (376), Expect = 6e-34
 Identities = 89/250 (35%), Positives = 134/250 (53%), Gaps = 3/250 (1%)
 Frame = -2

Query: 742 ISPDCVTYNTLMHGYCKEGNMAAAYETMREMLRKGLKMDTFSLNTFLHVLCKEKKLDDAY 563
           + P+  T+N L+HGYC + N   A   + +M   G   D  + NT L  LCK  +L    
Sbjct: 207 VQPNVNTFNILIHGYCSDNNTEEALRLINQMGEYGCCPDNVTYNTVLTALCKRSQLTQVR 266

Query: 562 ELLHNAK--GYDPDEVSYGTLIMGYFKDEDVDRALKLWGEMKKKGILPSVVTYNSVIGGL 389
           +LL   K  G  P+  +Y  L+ GY K + +  A ++   M  KG+LP V TYN+++ GL
Sbjct: 267 DLLLQMKNSGLFPNRNTYNILVHGYCKLKWLKEAAEVIELMTGKGMLPDVWTYNTMVRGL 326

Query: 388 FKSGKTEQAMAKLKELLES-GLVPDKTTYSTLVHGYCWHGDMDKALEFHNQMVANSFKPD 212
              GK ++A+ +L++ +ES  LVPD  TY+TL+ G   H   D A +   +M A   K +
Sbjct: 327 CDEGKIDEAV-RLRDKMESFKLVPDVVTYNTLIDGCFEHRGSDAAFKLVEEMKARGVKEN 385

Query: 211 ITTCNILLHGLCSEKMVDKALKLFNMWLSKGKSVDAITYNTLITGLCIEGKIEAALELLT 32
             T NI++   C+E  +D+A  +    +  G S D  TYNT+I G C  GK+  A +++ 
Sbjct: 386 GVTHNIMIKWFCTEGKIDEASNVMVKMVESGFSPDCFTYNTMINGYCKAGKMAEAYKMMD 445

Query: 31  EMQEKKLKPD 2
           EM  K LK D
Sbjct: 446 EMGRKGLKLD 455



 Score =  115 bits (289), Expect = 7e-24
 Identities = 72/226 (31%), Positives = 116/226 (51%), Gaps = 5/226 (2%)
 Frame = -2

Query: 670 YETMREMLRKGLKMDTFSLNTFLHVLCKEKK---LDDAYELLHNAK--GYDPDEVSYGTL 506
           ++   +M R   + +  + NT L+ L +      L  + E+  +A   G  P+  ++  L
Sbjct: 158 HQIFNKMKRLRFRPNLLTCNTLLNALVRSNSSHSLVFSREVFQDAVKLGVQPNVNTFNIL 217

Query: 505 IMGYFKDEDVDRALKLWGEMKKKGILPSVVTYNSVIGGLFKSGKTEQAMAKLKELLESGL 326
           I GY  D + + AL+L  +M + G  P  VTYN+V+  L K  +  Q    L ++  SGL
Sbjct: 218 IHGYCSDNNTEEALRLINQMGEYGCCPDNVTYNTVLTALCKRSQLTQVRDLLLQMKNSGL 277

Query: 325 VPDKTTYSTLVHGYCWHGDMDKALEFHNQMVANSFKPDITTCNILLHGLCSEKMVDKALK 146
            P++ TY+ LVHGYC    + +A E    M      PD+ T N ++ GLC E  +D+A++
Sbjct: 278 FPNRNTYNILVHGYCKLKWLKEAAEVIELMTGKGMLPDVWTYNTMVRGLCDEGKIDEAVR 337

Query: 145 LFNMWLSKGKSVDAITYNTLITGLCIEGKIEAALELLTEMQEKKLK 8
           L +   S     D +TYNTLI G       +AA +L+ EM+ + +K
Sbjct: 338 LRDKMESFKLVPDVVTYNTLIDGCFEHRGSDAAFKLVEEMKARGVK 383



 Score =  108 bits (270), Expect = 1e-21
 Identities = 67/252 (26%), Positives = 117/252 (46%), Gaps = 13/252 (5%)
 Frame = -2

Query: 733  DCVTYNTLMHGYCKEGNMAAAYETMREMLRKGLKMDTFSLNTFLHVLCKEKKLDDAYELL 554
            D VTY TL+ GY K+     A +   EM   G+     + NT +  LC   K D A + L
Sbjct: 490  DEVTYGTLIMGYFKDEQADRALKLWEEMKETGIVATIITYNTIIRGLCLSGKTDQAVDKL 549

Query: 553  HNA--KGYDPDEVSYGTLIMGYFKDEDVDRALKLWGEMKKKGILPSVVTYNSVIGGLFKS 380
            +    KG  PDE +   +I GY  +  V++A +   +M +  + P + T N ++ GL + 
Sbjct: 550  NELLEKGLVPDESTSNIIIHGYCWEGAVEKAFQFHNKMVEHSLKPDIFTCNILLRGLCRE 609

Query: 379  GKTEQAMAKLKELLESGLVPDKTTYSTLVHGYCWHGDMDKALEFHNQMVANSFKPDITTC 200
            G  E+ +      +  G   D  TY+ ++  +C    ++ A +   +M   + +PD  T 
Sbjct: 610  GMLEKGLTLFNTWISKGKPMDTVTYNIIISSFCKERRLEDAFDLMTEMEGKNLEPDRYTY 669

Query: 199  NILLHGLCSEKMVDKALKLFNMWLSKGKSVDA-----------ITYNTLITGLCIEGKIE 53
            N ++ GL      ++A KL   +  KG+ V             + Y+  I+ LC +GK +
Sbjct: 670  NAIVTGLTKAGRTEEAEKLALKFAEKGQQVKTQDTSPELGTSDMMYSEQISSLCTQGKYK 729

Query: 52   AALELLTEMQEK 17
             A++L  + ++K
Sbjct: 730  DAMKLFQQAEQK 741



 Score =  102 bits (253), Expect = 1e-19
 Identities = 52/147 (35%), Positives = 81/147 (55%)
 Frame = -2

Query: 442 KKGILPSVVTYNSVIGGLFKSGKTEQAMAKLKELLESGLVPDKTTYSTLVHGYCWHGDMD 263
           K G+ P+V T+N +I G      TE+A+  + ++ E G  PD  TY+T++   C    + 
Sbjct: 204 KLGVQPNVNTFNILIHGYCSDNNTEEALRLINQMGEYGCCPDNVTYNTVLTALCKRSQLT 263

Query: 262 KALEFHNQMVANSFKPDITTCNILLHGLCSEKMVDKALKLFNMWLSKGKSVDAITYNTLI 83
           +  +   QM  +   P+  T NIL+HG C  K + +A ++  +   KG   D  TYNT++
Sbjct: 264 QVRDLLLQMKNSGLFPNRNTYNILVHGYCKLKWLKEAAEVIELMTGKGMLPDVWTYNTMV 323

Query: 82  TGLCIEGKIEAALELLTEMQEKKLKPD 2
            GLC EGKI+ A+ L  +M+  KL PD
Sbjct: 324 RGLCDEGKIDEAVRLRDKMESFKLVPD 350



 Score = 99.8 bits (247), Expect = 5e-19
 Identities = 69/243 (28%), Positives = 109/243 (44%), Gaps = 6/243 (2%)
 Frame = -2

Query: 736  PDCVTYNTLMHGYCKEGNMAAAYETMREMLRKGLKMDTFSLNTFLHVLCKEKKLDDAYEL 557
            PD  T N ++HGYC EG +  A++   +M+   LK D F+ N  L  LC+E  L+    L
Sbjct: 559  PDESTSNIIIHGYCWEGAVEKAFQFHNKMVEHSLKPDIFTCNILLRGLCREGMLEKGLTL 618

Query: 556  LHN--AKGYDPDEVSYGTLIMGYFKDEDVDRALKLWGEMKKKGILPSVVTYNSVIGGLFK 383
             +   +KG   D V+Y  +I  + K+  ++ A  L  EM+ K + P   TYN+++ GL K
Sbjct: 619  FNTWISKGKPMDTVTYNIIISSFCKERRLEDAFDLMTEMEGKNLEPDRYTYNAIVTGLTK 678

Query: 382  SGKTEQAMAKLKELLESGLVPDKTTYSTLVHGYCWHGDMDKALEFHNQMVANSFKPDITT 203
            +G+TE+A     +  E G                             Q+      P++ T
Sbjct: 679  AGRTEEAEKLALKFAEKG----------------------------QQVKTQDTSPELGT 710

Query: 202  CNIL----LHGLCSEKMVDKALKLFNMWLSKGKSVDAITYNTLITGLCIEGKIEAALELL 35
             +++    +  LC++     A+KLF     KG S++  TY  L+ GL    K      LL
Sbjct: 711  SDMMYSEQISSLCTQGKYKDAMKLFQQAEQKGVSLNKYTYIKLMDGLLKRRKSFTTTSLL 770

Query: 34   TEM 26
              M
Sbjct: 771  PFM 773



 Score = 77.4 bits (189), Expect = 3e-12
 Identities = 47/165 (28%), Positives = 78/165 (47%), Gaps = 13/165 (7%)
 Frame = -2

Query: 742  ISPDCVTYNTLMHGYCKEGNMAAAYETMREMLRKGLKMDTFSLNTFLHVLCKEKKLDDAY 563
            + PD  T N L+ G C+EG +          + KG  MDT + N  +   CKE++L+DA+
Sbjct: 592  LKPDIFTCNILLRGLCREGMLEKGLTLFNTWISKGKPMDTVTYNIIISSFCKERRLEDAF 651

Query: 562  ELLHNAKG--YDPDEVSYGTLIMGYFKDEDVDRALKLWGEMKKKG-----------ILPS 422
            +L+   +G   +PD  +Y  ++ G  K    + A KL  +  +KG           +  S
Sbjct: 652  DLMTEMEGKNLEPDRYTYNAIVTGLTKAGRTEEAEKLALKFAEKGQQVKTQDTSPELGTS 711

Query: 421  VVTYNSVIGGLFKSGKTEQAMAKLKELLESGLVPDKTTYSTLVHG 287
             + Y+  I  L   GK + AM   ++  + G+  +K TY  L+ G
Sbjct: 712  DMMYSEQISSLCTQGKYKDAMKLFQQAEQKGVSLNKYTYIKLMDG 756