BLASTX nr result

ID: Coptis23_contig00004313 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00004313
         (1391 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003539822.1| PREDICTED: vacuolar protein sorting-associat...   505   e-172
ref|XP_003538127.1| PREDICTED: vacuolar protein sorting-associat...   505   e-172
ref|XP_003596788.1| Vacuolar sorting protein 4b [Medicago trunca...   501   e-171
ref|XP_002523783.1| Vacuolar protein sorting-associated protein ...   502   e-170
ref|XP_004149260.1| PREDICTED: vacuolar protein sorting-associat...   499   e-170

>ref|XP_003539822.1| PREDICTED: vacuolar protein sorting-associated protein 4B-like
            [Glycine max]
          Length = 434

 Score =  505 bits (1300), Expect(2) = e-172
 Identities = 249/266 (93%), Positives = 260/266 (97%)
 Frame = +3

Query: 303  LYGPPGTGKSYLAKAVATEADSTFFSVSSSDLVSKWMGESEKLVSNLFQMARESAPSIIF 482
            LYGPPGTGKSYLAKAVATEADSTFFSVSSSDLVSKWMGESEKLVSNLFQMARESAPSIIF
Sbjct: 169  LYGPPGTGKSYLAKAVATEADSTFFSVSSSDLVSKWMGESEKLVSNLFQMARESAPSIIF 228

Query: 483  VDEIDSLCGTRGEGNESEASRRIKTELLVQMQGVGNNDQKVLVLAATNTPYALDQAIRRR 662
            VDEIDSLCG RGEGNESEASRRIKTELLVQMQGVG+NDQKVLVLAATNTPYALDQAIRRR
Sbjct: 229  VDEIDSLCGQRGEGNESEASRRIKTELLVQMQGVGHNDQKVLVLAATNTPYALDQAIRRR 288

Query: 663  FDKRIYIPLPDLKARQHMFKVHLGDTPHNLTESDYEHLARKSEGFSGSDISVCVKDVLFE 842
            FDKRIYIPLPDLKARQHMFKVHLGDTPHNL ESD+EHLARK+EGFSGSDISVCVKDVLFE
Sbjct: 289  FDKRIYIPLPDLKARQHMFKVHLGDTPHNLAESDFEHLARKTEGFSGSDISVCVKDVLFE 348

Query: 843  PVRKTQDAMFFIKTPNNMWVPCGPKQQGAVQTTMQDLAAKGLAAQILPPPISRSDFDKVL 1022
            PVRKTQDAMFF + P +MW+PCGPKQQ AVQTTMQDLAAKGLA++ILPPPISR+DFDKVL
Sbjct: 349  PVRKTQDAMFFFRNPEDMWIPCGPKQQSAVQTTMQDLAAKGLASKILPPPISRTDFDKVL 408

Query: 1023 ARQRPTVSKTDLEVHERFTKEFGEEG 1100
            ARQRPTVSK+DL+VHERFTKEFGEEG
Sbjct: 409  ARQRPTVSKSDLDVHERFTKEFGEEG 434



 Score =  127 bits (319), Expect(2) = e-172
 Identities = 59/63 (93%), Positives = 62/63 (98%)
 Frame = +1

Query: 61  LRSGLNSAIIREKPNVKWNDVAGLESAKQALQEAVILPVKFPQFFVGKRKPWRAFLLYGP 240
           LR+GLNSAI+REKPNVKWNDVAGLESAKQALQEAVILPVKFPQFF GKR+PWRAFLLYGP
Sbjct: 113 LRAGLNSAIVREKPNVKWNDVAGLESAKQALQEAVILPVKFPQFFTGKRRPWRAFLLYGP 172

Query: 241 PGT 249
           PGT
Sbjct: 173 PGT 175


>ref|XP_003538127.1| PREDICTED: vacuolar protein sorting-associated protein 4B-like
            [Glycine max]
          Length = 434

 Score =  505 bits (1300), Expect(2) = e-172
 Identities = 248/266 (93%), Positives = 260/266 (97%)
 Frame = +3

Query: 303  LYGPPGTGKSYLAKAVATEADSTFFSVSSSDLVSKWMGESEKLVSNLFQMARESAPSIIF 482
            LYGPPGTGKSYLAKAVATEADSTFFSVSSSDLVSKWMGESEKLVSNLFQMARESAPSIIF
Sbjct: 169  LYGPPGTGKSYLAKAVATEADSTFFSVSSSDLVSKWMGESEKLVSNLFQMARESAPSIIF 228

Query: 483  VDEIDSLCGTRGEGNESEASRRIKTELLVQMQGVGNNDQKVLVLAATNTPYALDQAIRRR 662
            VDEIDSLCG RGEGNESEASRRIKTELLVQMQGVG+NDQKVLVLAATNTPYALDQAIRRR
Sbjct: 229  VDEIDSLCGQRGEGNESEASRRIKTELLVQMQGVGHNDQKVLVLAATNTPYALDQAIRRR 288

Query: 663  FDKRIYIPLPDLKARQHMFKVHLGDTPHNLTESDYEHLARKSEGFSGSDISVCVKDVLFE 842
            FDKRIYIPLPDLKARQHMFKVHLGDTPHNL ESD+EHLARK+EGFSGSDISVCVKDVLFE
Sbjct: 289  FDKRIYIPLPDLKARQHMFKVHLGDTPHNLAESDFEHLARKTEGFSGSDISVCVKDVLFE 348

Query: 843  PVRKTQDAMFFIKTPNNMWVPCGPKQQGAVQTTMQDLAAKGLAAQILPPPISRSDFDKVL 1022
            PVRKTQDAMFF + P  MW+PCGPKQQG+VQTTMQD+AAKGLA++ILPPPISR+DFDKVL
Sbjct: 349  PVRKTQDAMFFFRNPEGMWIPCGPKQQGSVQTTMQDIAAKGLASKILPPPISRTDFDKVL 408

Query: 1023 ARQRPTVSKTDLEVHERFTKEFGEEG 1100
            ARQRPTVSK+DL+VHERFTKEFGEEG
Sbjct: 409  ARQRPTVSKSDLDVHERFTKEFGEEG 434



 Score =  127 bits (319), Expect(2) = e-172
 Identities = 59/63 (93%), Positives = 62/63 (98%)
 Frame = +1

Query: 61  LRSGLNSAIIREKPNVKWNDVAGLESAKQALQEAVILPVKFPQFFVGKRKPWRAFLLYGP 240
           LR+GLNSAI+REKPNVKWNDVAGLESAKQALQEAVILPVKFPQFF GKR+PWRAFLLYGP
Sbjct: 113 LRAGLNSAIVREKPNVKWNDVAGLESAKQALQEAVILPVKFPQFFTGKRRPWRAFLLYGP 172

Query: 241 PGT 249
           PGT
Sbjct: 173 PGT 175


>ref|XP_003596788.1| Vacuolar sorting protein 4b [Medicago truncatula]
            gi|355485836|gb|AES67039.1| Vacuolar sorting protein 4b
            [Medicago truncatula]
          Length = 438

 Score =  501 bits (1289), Expect(2) = e-171
 Identities = 246/266 (92%), Positives = 258/266 (96%)
 Frame = +3

Query: 303  LYGPPGTGKSYLAKAVATEADSTFFSVSSSDLVSKWMGESEKLVSNLFQMARESAPSIIF 482
            LYGPPGTGKSYLAKAVATEADSTFFS+SSSDLVSKWMGESEKLVSNLFQMARESAPSIIF
Sbjct: 173  LYGPPGTGKSYLAKAVATEADSTFFSISSSDLVSKWMGESEKLVSNLFQMARESAPSIIF 232

Query: 483  VDEIDSLCGTRGEGNESEASRRIKTELLVQMQGVGNNDQKVLVLAATNTPYALDQAIRRR 662
            VDEIDSLCG RGEGNESEASRRIKTELLVQMQGVGNNDQKVLVLAATNTPYALDQAIRRR
Sbjct: 233  VDEIDSLCGQRGEGNESEASRRIKTELLVQMQGVGNNDQKVLVLAATNTPYALDQAIRRR 292

Query: 663  FDKRIYIPLPDLKARQHMFKVHLGDTPHNLTESDYEHLARKSEGFSGSDISVCVKDVLFE 842
            FDKRIYIPLPDLKARQHMFKVHLGDTPHNLTE DYE+LA ++EGFSGSDISVCVKDVLFE
Sbjct: 293  FDKRIYIPLPDLKARQHMFKVHLGDTPHNLTEKDYEYLASRTEGFSGSDISVCVKDVLFE 352

Query: 843  PVRKTQDAMFFIKTPNNMWVPCGPKQQGAVQTTMQDLAAKGLAAQILPPPISRSDFDKVL 1022
            PVRKTQDAMFF K+P  MW+PCGPKQQGAVQTTM DLA KGLA++ILPPPI+R+DF+KVL
Sbjct: 353  PVRKTQDAMFFFKSPEGMWIPCGPKQQGAVQTTMTDLATKGLASKILPPPITRTDFEKVL 412

Query: 1023 ARQRPTVSKTDLEVHERFTKEFGEEG 1100
            ARQRPTVSK+DLEVHERFTKEFGEEG
Sbjct: 413  ARQRPTVSKSDLEVHERFTKEFGEEG 438



 Score =  127 bits (320), Expect(2) = e-171
 Identities = 60/63 (95%), Positives = 62/63 (98%)
 Frame = +1

Query: 61  LRSGLNSAIIREKPNVKWNDVAGLESAKQALQEAVILPVKFPQFFVGKRKPWRAFLLYGP 240
           LR+GLNSAIIREKPNVKWNDVAGLESAKQALQEAVILPVKFPQFF GKR+PWRAFLLYGP
Sbjct: 117 LRAGLNSAIIREKPNVKWNDVAGLESAKQALQEAVILPVKFPQFFTGKRRPWRAFLLYGP 176

Query: 241 PGT 249
           PGT
Sbjct: 177 PGT 179


>ref|XP_002523783.1| Vacuolar protein sorting-associated protein VPS4, putative [Ricinus
            communis] gi|223536871|gb|EEF38509.1| Vacuolar protein
            sorting-associated protein VPS4, putative [Ricinus
            communis]
          Length = 431

 Score =  502 bits (1292), Expect(2) = e-170
 Identities = 247/266 (92%), Positives = 261/266 (98%)
 Frame = +3

Query: 303  LYGPPGTGKSYLAKAVATEADSTFFSVSSSDLVSKWMGESEKLVSNLFQMARESAPSIIF 482
            LYGPPGTGKSYLAKAVATEADSTFFS+SSSDLVSKWMGESEKLVSNLFQMARES PSIIF
Sbjct: 166  LYGPPGTGKSYLAKAVATEADSTFFSISSSDLVSKWMGESEKLVSNLFQMARESQPSIIF 225

Query: 483  VDEIDSLCGTRGEGNESEASRRIKTELLVQMQGVGNNDQKVLVLAATNTPYALDQAIRRR 662
            +DEIDSLCG RGEGNESEASRRIKTELLVQMQGVGNNDQKVLVLAATNTPYALDQAIRRR
Sbjct: 226  IDEIDSLCGQRGEGNESEASRRIKTELLVQMQGVGNNDQKVLVLAATNTPYALDQAIRRR 285

Query: 663  FDKRIYIPLPDLKARQHMFKVHLGDTPHNLTESDYEHLARKSEGFSGSDISVCVKDVLFE 842
            FDKRIYIPLPDLKARQHMFKVHLGDTPHNLTESD+E LAR++EGFSGSDISVCVKDVLFE
Sbjct: 286  FDKRIYIPLPDLKARQHMFKVHLGDTPHNLTESDFESLARRTEGFSGSDISVCVKDVLFE 345

Query: 843  PVRKTQDAMFFIKTPNNMWVPCGPKQQGAVQTTMQDLAAKGLAAQILPPPISRSDFDKVL 1022
            PVRKTQDAMFFIKTPN+MWVPCGPKQ GAVQ +MQ+LAA+GLAA+ILPPPI+++DFDKVL
Sbjct: 346  PVRKTQDAMFFIKTPNDMWVPCGPKQPGAVQISMQELAAQGLAAKILPPPITKTDFDKVL 405

Query: 1023 ARQRPTVSKTDLEVHERFTKEFGEEG 1100
            ARQRPTVSK+DLEVHERFTKEFGEEG
Sbjct: 406  ARQRPTVSKSDLEVHERFTKEFGEEG 431



 Score =  125 bits (315), Expect(2) = e-170
 Identities = 59/63 (93%), Positives = 61/63 (96%)
 Frame = +1

Query: 61  LRSGLNSAIIREKPNVKWNDVAGLESAKQALQEAVILPVKFPQFFVGKRKPWRAFLLYGP 240
           LR+GLNSAIIREKPNV WNDVAGLESAKQALQEAVILPVKFPQFF GKR+PWRAFLLYGP
Sbjct: 110 LRAGLNSAIIREKPNVNWNDVAGLESAKQALQEAVILPVKFPQFFTGKRRPWRAFLLYGP 169

Query: 241 PGT 249
           PGT
Sbjct: 170 PGT 172


>ref|XP_004149260.1| PREDICTED: vacuolar protein sorting-associated protein 4-like
            [Cucumis sativus] gi|449526928|ref|XP_004170465.1|
            PREDICTED: vacuolar protein sorting-associated protein
            4-like [Cucumis sativus]
          Length = 433

 Score =  499 bits (1285), Expect(2) = e-170
 Identities = 244/266 (91%), Positives = 262/266 (98%)
 Frame = +3

Query: 303  LYGPPGTGKSYLAKAVATEADSTFFSVSSSDLVSKWMGESEKLVSNLFQMARESAPSIIF 482
            LYGPPGTGKSYLAKAVATEADSTFFS+SSSDLVSKWMGESEKLVSNLFQMAR+SAPSIIF
Sbjct: 168  LYGPPGTGKSYLAKAVATEADSTFFSISSSDLVSKWMGESEKLVSNLFQMARDSAPSIIF 227

Query: 483  VDEIDSLCGTRGEGNESEASRRIKTELLVQMQGVGNNDQKVLVLAATNTPYALDQAIRRR 662
            +DEIDSLCG RGEGNESEASRRIKTELLVQMQGVG+NDQKVLVLAATNTPYALDQAIRRR
Sbjct: 228  IDEIDSLCGQRGEGNESEASRRIKTELLVQMQGVGHNDQKVLVLAATNTPYALDQAIRRR 287

Query: 663  FDKRIYIPLPDLKARQHMFKVHLGDTPHNLTESDYEHLARKSEGFSGSDISVCVKDVLFE 842
            FDKRIYIPLPDLKARQHMFKVHLGDTPHNLTE+D+E+LARK++GFSGSDISVCVKDVLFE
Sbjct: 288  FDKRIYIPLPDLKARQHMFKVHLGDTPHNLTEADFENLARKTDGFSGSDISVCVKDVLFE 347

Query: 843  PVRKTQDAMFFIKTPNNMWVPCGPKQQGAVQTTMQDLAAKGLAAQILPPPISRSDFDKVL 1022
            PVRKTQDAMFFI TP+ MWVPCGPKQQGAVQ +MQ+LAAKGLA++ILPPPI+R+DFDKVL
Sbjct: 348  PVRKTQDAMFFIMTPDGMWVPCGPKQQGAVQISMQELAAKGLASKILPPPITRTDFDKVL 407

Query: 1023 ARQRPTVSKTDLEVHERFTKEFGEEG 1100
            ARQRPTVSK+DLE+HERFTKEFGEEG
Sbjct: 408  ARQRPTVSKSDLEIHERFTKEFGEEG 433



 Score =  125 bits (315), Expect(2) = e-170
 Identities = 59/63 (93%), Positives = 62/63 (98%)
 Frame = +1

Query: 61  LRSGLNSAIIREKPNVKWNDVAGLESAKQALQEAVILPVKFPQFFVGKRKPWRAFLLYGP 240
           LR+GLNSAIIREKP+VKWNDVAGLESAKQALQEAVILPVKFPQFF GKR+PWRAFLLYGP
Sbjct: 112 LRAGLNSAIIREKPDVKWNDVAGLESAKQALQEAVILPVKFPQFFTGKRRPWRAFLLYGP 171

Query: 241 PGT 249
           PGT
Sbjct: 172 PGT 174


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