BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00004297
         (483 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002283616.1| PREDICTED: 30S ribosomal protein 3, chloropl...   146   1e-33
emb|CBI33662.3| unnamed protein product [Vitis vinifera]              146   1e-33
ref|XP_004145640.1| PREDICTED: 30S ribosomal protein 3, chloropl...   145   3e-33
ref|NP_001236243.1| uncharacterized protein LOC100306266 [Glycin...   144   6e-33
gb|AFK46934.1| unknown [Lotus japonicus]                              143   2e-32

>ref|XP_002283616.1| PREDICTED: 30S ribosomal protein 3, chloroplastic-like isoform 1
           [Vitis vinifera] gi|359488272|ref|XP_003633730.1|
           PREDICTED: 30S ribosomal protein 3, chloroplastic-like
           isoform 2 [Vitis vinifera]
          Length = 176

 Score =  146 bits (369), Expect = 1e-33
 Identities = 76/116 (65%), Positives = 78/116 (67%)
 Frame = +1

Query: 67  LGVVVKPMEKSRLVLKFIWMEKNIGLALDQVIPGHGTIPLSPYYFWPRKXXXXXXXXXXX 246
           LGVVVKPMEK RLVLKFIWMEKNIG+ALDQ IPGHGTIPLSPYYFWPRK           
Sbjct: 85  LGVVVKPMEKPRLVLKFIWMEKNIGVALDQAIPGHGTIPLSPYYFWPRK----------- 133

Query: 247 XXXXXXXXXXXXXXXAWXXXXXXXXXXPWISQKRMIILLNQATDIINLWQQSGGNL 414
                          AW          PWISQK+MIILLNQATDIINLWQQSGGNL
Sbjct: 134 --------------DAWEEIKVLLESKPWISQKQMIILLNQATDIINLWQQSGGNL 175


>emb|CBI33662.3| unnamed protein product [Vitis vinifera]
          Length = 175

 Score =  146 bits (369), Expect = 1e-33
 Identities = 76/116 (65%), Positives = 78/116 (67%)
 Frame = +1

Query: 67  LGVVVKPMEKSRLVLKFIWMEKNIGLALDQVIPGHGTIPLSPYYFWPRKXXXXXXXXXXX 246
           LGVVVKPMEK RLVLKFIWMEKNIG+ALDQ IPGHGTIPLSPYYFWPRK           
Sbjct: 84  LGVVVKPMEKPRLVLKFIWMEKNIGVALDQAIPGHGTIPLSPYYFWPRK----------- 132

Query: 247 XXXXXXXXXXXXXXXAWXXXXXXXXXXPWISQKRMIILLNQATDIINLWQQSGGNL 414
                          AW          PWISQK+MIILLNQATDIINLWQQSGGNL
Sbjct: 133 --------------DAWEEIKVLLESKPWISQKQMIILLNQATDIINLWQQSGGNL 174


>ref|XP_004145640.1| PREDICTED: 30S ribosomal protein 3, chloroplastic-like [Cucumis
           sativus] gi|449484535|ref|XP_004156909.1| PREDICTED: 30S
           ribosomal protein 3, chloroplastic-like [Cucumis
           sativus]
          Length = 192

 Score =  145 bits (367), Expect = 3e-33
 Identities = 75/116 (64%), Positives = 78/116 (67%)
 Frame = +1

Query: 67  LGVVVKPMEKSRLVLKFIWMEKNIGLALDQVIPGHGTIPLSPYYFWPRKXXXXXXXXXXX 246
           LGVVVKPMEK RLVLKFIWMEKNIG+ALDQ+IPGHGTIPLSPYYFWPRK           
Sbjct: 101 LGVVVKPMEKPRLVLKFIWMEKNIGIALDQMIPGHGTIPLSPYYFWPRK----------- 149

Query: 247 XXXXXXXXXXXXXXXAWXXXXXXXXXXPWISQKRMIILLNQATDIINLWQQSGGNL 414
                          AW          PWISQK+MIILLNQATDIINLWQQ GGNL
Sbjct: 150 --------------DAWEELKVLLESKPWISQKQMIILLNQATDIINLWQQGGGNL 191


>ref|NP_001236243.1| uncharacterized protein LOC100306266 [Glycine max]
           gi|255628049|gb|ACU14369.1| unknown [Glycine max]
          Length = 158

 Score =  144 bits (364), Expect = 6e-33
 Identities = 74/116 (63%), Positives = 78/116 (67%)
 Frame = +1

Query: 67  LGVVVKPMEKSRLVLKFIWMEKNIGLALDQVIPGHGTIPLSPYYFWPRKXXXXXXXXXXX 246
           LGVVVKP EK RLVLKFIWMEKNIG+ALDQ++PGHGTIPLSPYYFWPRK           
Sbjct: 67  LGVVVKPTEKPRLVLKFIWMEKNIGIALDQMVPGHGTIPLSPYYFWPRK----------- 115

Query: 247 XXXXXXXXXXXXXXXAWXXXXXXXXXXPWISQKRMIILLNQATDIINLWQQSGGNL 414
                          AW          PWISQK+MIILLNQATDIINLWQQSGGNL
Sbjct: 116 --------------DAWEELKELLENKPWISQKQMIILLNQATDIINLWQQSGGNL 157


>gb|AFK46934.1| unknown [Lotus japonicus]
          Length = 175

 Score =  143 bits (360), Expect = 2e-32
 Identities = 73/116 (62%), Positives = 77/116 (66%)
 Frame = +1

Query: 67  LGVVVKPMEKSRLVLKFIWMEKNIGLALDQVIPGHGTIPLSPYYFWPRKXXXXXXXXXXX 246
           LGVVVKP +K RLVLKFIWMEKNIG+ALDQ +PGHGTIPLSPYYFWPRK           
Sbjct: 84  LGVVVKPTDKPRLVLKFIWMEKNIGIALDQAVPGHGTIPLSPYYFWPRK----------- 132

Query: 247 XXXXXXXXXXXXXXXAWXXXXXXXXXXPWISQKRMIILLNQATDIINLWQQSGGNL 414
                          AW          PWISQK+MIILLNQATDIINLWQQSGGNL
Sbjct: 133 --------------DAWEELKELLESKPWISQKQMIILLNQATDIINLWQQSGGNL 174