BLASTX nr result
ID: Coptis23_contig00004289
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Coptis23_contig00004289
(1408 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002306414.1| predicted protein [Populus trichocarpa] gi|2... 325 e-118
ref|XP_002263144.2| PREDICTED: LOW QUALITY PROTEIN: 1-aminocyclo... 316 e-118
emb|CBI23495.3| unnamed protein product [Vitis vinifera] 316 e-118
gb|AFK49211.1| unknown [Lotus japonicus] 322 e-117
emb|CAN80862.1| hypothetical protein VITISV_011327 [Vitis vinifera] 317 e-117
>ref|XP_002306414.1| predicted protein [Populus trichocarpa] gi|222855863|gb|EEE93410.1|
predicted protein [Populus trichocarpa]
Length = 366
Score = 325 bits (833), Expect(2) = e-118
Identities = 151/244 (61%), Positives = 196/244 (80%)
Frame = +2
Query: 86 LFDFVVKKGNGVKGMIDSGLSEVPDRFIQPEHERINKKNMDSHVVSLPLIDLSELDGAKH 265
+F+FVV+ GNGVKGM+D GLSEVP++++QP ERI+K N +H P IDLS+LDG H
Sbjct: 11 MFNFVVRDGNGVKGMVDFGLSEVPEQYVQPPEERIDKLNATAH--DNPPIDLSKLDGPDH 68
Query: 266 DQVVETLVKSAETLGFFQVVNHGLSIQLLEELKDAAHQFFNQPPDKKSVYLNGVSPSPLV 445
DQ+VE + +AETLGFFQV+NHG+ ++LLE LKDAA+ FF QPP+KK+VY GVSPSP V
Sbjct: 69 DQIVEEIATAAETLGFFQVMNHGVPVELLESLKDAANNFFGQPPEKKAVYRKGVSPSPSV 128
Query: 446 KYGTSFLPEKEKVLQWRDYVSMIYTSDDDALKHWPDQCKGVTLKYLHASTKIAKTILEVL 625
+YGTSF+P+KEK L+W+DY+SM YT+D +AL++WP +CK V L+YL S K+ + +LE+L
Sbjct: 129 RYGTSFVPDKEKALEWKDYISMRYTTDAEALEYWPQECKDVALEYLRTSIKMVRKVLEIL 188
Query: 626 MKGLGVTMDTSMADAYMGLRLVNMNFYPTCPAPELTVGATRHSDIGTLTVLLQDGVGGLS 805
+ LGVT+D S D +GL+LVNMNFYPTCP PELTVG RHSD+G LTVLLQD +GGL
Sbjct: 189 IGKLGVTLDDSKIDGLIGLKLVNMNFYPTCPNPELTVGVGRHSDMGILTVLLQDDIGGLY 248
Query: 806 IKVE 817
+K+E
Sbjct: 249 VKME 252
Score = 129 bits (324), Expect(2) = e-118
Identities = 63/93 (67%), Positives = 73/93 (78%)
Frame = +3
Query: 915 LVINIGDTLQILSNGRYKSAEHRVRTTSTHSRVSIPLFLGSRPEVKIGPLPEVVDKDGGT 1094
LVIN+GDTLQILSNGRYKSAEHRVRTT T SRVSIP+F +P +IGPLP+VV++DG
Sbjct: 273 LVINVGDTLQILSNGRYKSAEHRVRTTRTKSRVSIPIFTIPKPTERIGPLPQVVERDGVA 332
Query: 1095 EYKECLFGEYMNNFYGEFHYGKKYLDFAKITQP 1193
Y+E +F EYMNNF+ H GKK LDFAK P
Sbjct: 333 RYREFIFEEYMNNFFSNAHDGKKSLDFAKNIWP 365
>ref|XP_002263144.2| PREDICTED: LOW QUALITY PROTEIN: 1-aminocyclopropane-1-carboxylate
oxidase homolog 12 [Vitis vinifera]
Length = 638
Score = 316 bits (810), Expect(2) = e-118
Identities = 148/244 (60%), Positives = 194/244 (79%)
Frame = +2
Query: 86 LFDFVVKKGNGVKGMIDSGLSEVPDRFIQPEHERINKKNMDSHVVSLPLIDLSELDGAKH 265
+++FVV+ GNGVKGM+D GL +VP+++IQP HERI+K S+ P IDLS LDG +H
Sbjct: 283 VYNFVVRDGNGVKGMVDLGLEKVPEQYIQPHHERIDKLKASSY--DRPPIDLSMLDGPQH 340
Query: 266 DQVVETLVKSAETLGFFQVVNHGLSIQLLEELKDAAHQFFNQPPDKKSVYLNGVSPSPLV 445
QVV + ++AE +GFFQVVNH + I++LE +K AAH+FF Q P+KK+VY GVSPSP V
Sbjct: 341 SQVVGLIAEAAERVGFFQVVNHRVPIEVLESVKSAAHEFFGQAPEKKAVYRKGVSPSPYV 400
Query: 446 KYGTSFLPEKEKVLQWRDYVSMIYTSDDDALKHWPDQCKGVTLKYLHASTKIAKTILEVL 625
KYGTSF+PEKEK L+W+DYVSM+YTSD +AL+ WP++CK V L+YL AS + + ILEVL
Sbjct: 401 KYGTSFVPEKEKALEWKDYVSMVYTSDGEALEFWPNECKEVALEYLKASNSMVRRILEVL 460
Query: 626 MKGLGVTMDTSMADAYMGLRLVNMNFYPTCPAPELTVGATRHSDIGTLTVLLQDGVGGLS 805
M+ LGVT++ S D ++GL++VNMNFYP CP P+LTVG RHSD+G LTVLLQDG+GGL
Sbjct: 461 MEKLGVTLEESRMDGFIGLKIVNMNFYPICPNPDLTVGVARHSDMGMLTVLLQDGIGGLY 520
Query: 806 IKVE 817
+K+E
Sbjct: 521 VKME 524
Score = 135 bits (341), Expect(2) = e-118
Identities = 64/90 (71%), Positives = 76/90 (84%)
Frame = +3
Query: 915 LVINIGDTLQILSNGRYKSAEHRVRTTSTHSRVSIPLFLGSRPEVKIGPLPEVVDKDGGT 1094
L+IN+GDTLQILSNG+YKSAEHRVRTTST SRVSIP+F RP KIGPLP+VV++DG
Sbjct: 546 LIINVGDTLQILSNGKYKSAEHRVRTTSTQSRVSIPIFTTPRPNEKIGPLPQVVERDGVA 605
Query: 1095 EYKECLFGEYMNNFYGEFHYGKKYLDFAKI 1184
Y+E +F EYMNNF+G+ H GKK LDFA+I
Sbjct: 606 HYREFVFEEYMNNFFGKAHEGKKSLDFAQI 635
Score = 107 bits (267), Expect(2) = 3e-45
Identities = 50/82 (60%), Positives = 66/82 (80%)
Frame = +2
Query: 572 LKYLHASTKIAKTILEVLMKGLGVTMDTSMADAYMGLRLVNMNFYPTCPAPELTVGATRH 751
L++L AS + + ILEVLM+ LGVT++ S D +GL++VNMNFYPTCP P+LTVG RH
Sbjct: 90 LEFLKASISMVRRILEVLMEKLGVTLEESRIDDLIGLKMVNMNFYPTCPNPDLTVGVGRH 149
Query: 752 SDIGTLTVLLQDGVGGLSIKVE 817
SD+GTLT+LLQDG+ GL +K+E
Sbjct: 150 SDMGTLTMLLQDGIDGLYVKME 171
Score = 102 bits (255), Expect(2) = 3e-45
Identities = 49/75 (65%), Positives = 58/75 (77%)
Frame = +3
Query: 915 LVINIGDTLQILSNGRYKSAEHRVRTTSTHSRVSIPLFLGSRPEVKIGPLPEVVDKDGGT 1094
LVIN+GDTL ILSNG+YKSAEHRVRT ST SRVSIP+F +P KIGPLP VV++DG
Sbjct: 193 LVINVGDTLXILSNGKYKSAEHRVRTISTQSRVSIPIFTIPKPNEKIGPLPXVVERDGVA 252
Query: 1095 EYKECLFGEYMNNFY 1139
Y+E +F EYM +
Sbjct: 253 HYREVVFEEYMKKIF 267
Score = 70.9 bits (172), Expect = 8e-10
Identities = 37/64 (57%), Positives = 49/64 (76%)
Frame = +2
Query: 86 LFDFVVKKGNGVKGMIDSGLSEVPDRFIQPEHERINKKNMDSHVVSLPLIDLSELDGAKH 265
L++FVV+ NGVKGM+D GL +VP+++IQP+HERI+K S+ LP IDLS LDG +H
Sbjct: 11 LYNFVVRDVNGVKGMVDLGLEKVPEQYIQPQHERIDKLKASSY-DRLP-IDLSMLDGPQH 68
Query: 266 DQVV 277
QVV
Sbjct: 69 SQVV 72
>emb|CBI23495.3| unnamed protein product [Vitis vinifera]
Length = 366
Score = 316 bits (810), Expect(2) = e-118
Identities = 148/244 (60%), Positives = 194/244 (79%)
Frame = +2
Query: 86 LFDFVVKKGNGVKGMIDSGLSEVPDRFIQPEHERINKKNMDSHVVSLPLIDLSELDGAKH 265
+++FVV+ GNGVKGM+D GL +VP+++IQP HERI+K S+ P IDLS LDG +H
Sbjct: 11 VYNFVVRDGNGVKGMVDLGLEKVPEQYIQPHHERIDKLKASSY--DRPPIDLSMLDGPQH 68
Query: 266 DQVVETLVKSAETLGFFQVVNHGLSIQLLEELKDAAHQFFNQPPDKKSVYLNGVSPSPLV 445
QVV + ++AE +GFFQVVNH + I++LE +K AAH+FF Q P+KK+VY GVSPSP V
Sbjct: 69 SQVVGLIAEAAERVGFFQVVNHRVPIEVLESVKSAAHEFFGQAPEKKAVYRKGVSPSPYV 128
Query: 446 KYGTSFLPEKEKVLQWRDYVSMIYTSDDDALKHWPDQCKGVTLKYLHASTKIAKTILEVL 625
KYGTSF+PEKEK L+W+DYVSM+YTSD +AL+ WP++CK V L+YL AS + + ILEVL
Sbjct: 129 KYGTSFVPEKEKALEWKDYVSMVYTSDGEALEFWPNECKEVALEYLKASNSMVRRILEVL 188
Query: 626 MKGLGVTMDTSMADAYMGLRLVNMNFYPTCPAPELTVGATRHSDIGTLTVLLQDGVGGLS 805
M+ LGVT++ S D ++GL++VNMNFYP CP P+LTVG RHSD+G LTVLLQDG+GGL
Sbjct: 189 MEKLGVTLEESRMDGFIGLKIVNMNFYPICPNPDLTVGVARHSDMGMLTVLLQDGIGGLY 248
Query: 806 IKVE 817
+K+E
Sbjct: 249 VKME 252
Score = 135 bits (341), Expect(2) = e-118
Identities = 64/90 (71%), Positives = 76/90 (84%)
Frame = +3
Query: 915 LVINIGDTLQILSNGRYKSAEHRVRTTSTHSRVSIPLFLGSRPEVKIGPLPEVVDKDGGT 1094
L+IN+GDTLQILSNG+YKSAEHRVRTTST SRVSIP+F RP KIGPLP+VV++DG
Sbjct: 274 LIINVGDTLQILSNGKYKSAEHRVRTTSTQSRVSIPIFTTPRPNEKIGPLPQVVERDGVA 333
Query: 1095 EYKECLFGEYMNNFYGEFHYGKKYLDFAKI 1184
Y+E +F EYMNNF+G+ H GKK LDFA+I
Sbjct: 334 HYREFVFEEYMNNFFGKAHEGKKSLDFAQI 363
>gb|AFK49211.1| unknown [Lotus japonicus]
Length = 367
Score = 322 bits (825), Expect(2) = e-117
Identities = 148/244 (60%), Positives = 201/244 (82%)
Frame = +2
Query: 86 LFDFVVKKGNGVKGMIDSGLSEVPDRFIQPEHERINKKNMDSHVVSLPLIDLSELDGAKH 265
L++FVV+ GNGVKG++DSGLSEVP+R+IQP E+INK ++S + IDLS+L+G +H
Sbjct: 11 LYEFVVRDGNGVKGLVDSGLSEVPERYIQPPEEQINK--LESSPCDMQPIDLSKLNGPEH 68
Query: 266 DQVVETLVKSAETLGFFQVVNHGLSIQLLEELKDAAHQFFNQPPDKKSVYLNGVSPSPLV 445
D+VV+ +V +AETLGFFQVVNH + ++LLE LK+AAH FFN PP+KK+VY GVSPSP V
Sbjct: 69 DKVVDEIVGAAETLGFFQVVNHVVPVELLESLKEAAHTFFNLPPEKKAVYRAGVSPSPKV 128
Query: 446 KYGTSFLPEKEKVLQWRDYVSMIYTSDDDALKHWPDQCKGVTLKYLHASTKIAKTILEVL 625
KYGTSF+PEKEK L+W+DY+SM+Y+ D+DAL++WP+QCK L+YL S+K+ K ++E+L
Sbjct: 129 KYGTSFVPEKEKALEWKDYISMVYSCDEDALQYWPNQCKEAALEYLKLSSKLVKQLVEIL 188
Query: 626 MKGLGVTMDTSMADAYMGLRLVNMNFYPTCPAPELTVGATRHSDIGTLTVLLQDGVGGLS 805
+ LGV +D S ++ +G+++VNMN+YP CP PELTVG RHSD+GT+TVLLQDG+GGL
Sbjct: 189 VGKLGVELDDSKIESLLGMKMVNMNYYPECPNPELTVGVGRHSDMGTITVLLQDGIGGLY 248
Query: 806 IKVE 817
+KVE
Sbjct: 249 VKVE 252
Score = 128 bits (322), Expect(2) = e-117
Identities = 64/90 (71%), Positives = 71/90 (78%)
Frame = +3
Query: 915 LVINIGDTLQILSNGRYKSAEHRVRTTSTHSRVSIPLFLGSRPEVKIGPLPEVVDKDGGT 1094
LVINIGDTLQILSNGRYKSAEHRVRTTST SRVS+P+F +IGPLPEVV KDG
Sbjct: 272 LVINIGDTLQILSNGRYKSAEHRVRTTSTQSRVSVPVFTVPLASERIGPLPEVVKKDGLA 331
Query: 1095 EYKECLFGEYMNNFYGEFHYGKKYLDFAKI 1184
YKE ++ +YMNNF+G H GKK LDF KI
Sbjct: 332 RYKEVVWQDYMNNFFGNAHAGKKSLDFVKI 361
>emb|CAN80862.1| hypothetical protein VITISV_011327 [Vitis vinifera]
Length = 366
Score = 317 bits (813), Expect(2) = e-117
Identities = 149/244 (61%), Positives = 195/244 (79%)
Frame = +2
Query: 86 LFDFVVKKGNGVKGMIDSGLSEVPDRFIQPEHERINKKNMDSHVVSLPLIDLSELDGAKH 265
L++FVV+ GNGVKGM+D GL +VP+++IQP+HERI+K S+ P IDLS L G +H
Sbjct: 11 LYNFVVRDGNGVKGMVDLGLEKVPEQYIQPQHERIDKLKASSY--DRPPIDLSMLGGPQH 68
Query: 266 DQVVETLVKSAETLGFFQVVNHGLSIQLLEELKDAAHQFFNQPPDKKSVYLNGVSPSPLV 445
QV+E + ++AE++GFFQVVNHG+ ++LE +K AAH+FF Q P+KK+VY GVSPSP V
Sbjct: 69 SQVMELIAEAAESVGFFQVVNHGVPNEVLESVKSAAHEFFGQAPEKKAVYRKGVSPSPYV 128
Query: 446 KYGTSFLPEKEKVLQWRDYVSMIYTSDDDALKHWPDQCKGVTLKYLHASTKIAKTILEVL 625
KYGTSF+PEKEK L+W+DYVSM+YTSD DA + WP++CK V L++L AS + + ILEVL
Sbjct: 129 KYGTSFVPEKEKALEWKDYVSMVYTSDADAFEFWPNECKEVALEFLKASISMVRRILEVL 188
Query: 626 MKGLGVTMDTSMADAYMGLRLVNMNFYPTCPAPELTVGATRHSDIGTLTVLLQDGVGGLS 805
M+ LGVT+D S D +GL++VNMNFYPTCP P+LTVG RHSD+G LTVLLQDG+GGL
Sbjct: 189 MEKLGVTLDESRIDGLIGLKMVNMNFYPTCPNPDLTVGVGRHSDMGMLTVLLQDGIGGLY 248
Query: 806 IKVE 817
+K+E
Sbjct: 249 VKME 252
Score = 133 bits (334), Expect(2) = e-117
Identities = 64/90 (71%), Positives = 75/90 (83%)
Frame = +3
Query: 915 LVINIGDTLQILSNGRYKSAEHRVRTTSTHSRVSIPLFLGSRPEVKIGPLPEVVDKDGGT 1094
LVIN+GDTLQILSNG+YKSAEHRVRTTST SRVSIP+F RP KIGPLP+VV++DG
Sbjct: 274 LVINVGDTLQILSNGKYKSAEHRVRTTSTQSRVSIPIFTIPRPNEKIGPLPQVVERDGVA 333
Query: 1095 EYKECLFGEYMNNFYGEFHYGKKYLDFAKI 1184
Y+E + EYMNNF+G+ H GKK LDFA+I
Sbjct: 334 HYREVVXEEYMNNFFGKAHEGKKSLDFAQI 363