BLASTX nr result

ID: Coptis23_contig00004279 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00004279
         (910 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ABZ80409.1| hairpin-inducing protein [Casuarina glauca]            202   1e-49
gb|AAF62403.1|AF212183_1 harpin inducing protein [Nicotiana taba...   190   3e-46
ref|XP_002532540.1| syntaxin, plant, putative [Ricinus communis]...   187   3e-45
dbj|BAD22534.1| harpin inducing protein 1-like 18 [Nicotiana tab...   187   4e-45
dbj|BAD11071.1| hin1 like protein [Capsicum chinense]                 184   2e-44

>gb|ABZ80409.1| hairpin-inducing protein [Casuarina glauca]
          Length = 225

 Score =  202 bits (513), Expect = 1e-49
 Identities = 103/223 (46%), Positives = 138/223 (61%), Gaps = 2/223 (0%)
 Frame = -1

Query: 877 KQPILNGAFYGPSVPPQ-QSYHRHXXXXXXXXXXXXXXXXXFKXXXXXXXXXXXVALVFW 701
           KQ  LNGA+YGP+VPP  QSYHR                   K            AL+FW
Sbjct: 4   KQTNLNGAYYGPAVPPPPQSYHRPGRSGGRGCGCACFFCFLLKLIVSVIVILGLAALIFW 63

Query: 700 LIFRPTEVKFHVVDAXXXXXXXXXXXNQIRYNLALDMSVRNSNKRIGVYYDRIEARAYYE 521
           LIFRPT + FHV DA             ++YNLAL++SVRNSN++IGVYYD IEARAYYE
Sbjct: 64  LIFRPTSINFHVTDATLTQFDFSDNNT-LQYNLALNVSVRNSNRKIGVYYDTIEARAYYE 122

Query: 520 NELFATTTLTPFYQGRKNTTMLRPVFQGTSPITLRDSEITTFDREKNDGNFNIDIRLYLR 341
           ++ FAT +LTPFYQG K T+ L P F G   + L   +++ F+ EK  G ++ID++ YLR
Sbjct: 123 DQRFATDSLTPFYQGHKTTSTLNPEFAGQQLVLLETDQLSQFNSEKTSGVYSIDVKFYLR 182

Query: 340 IRFKVNRVKTRRLKPKIKCDLNVPFNR-ASTVAFNTKRCKIDY 215
           IRFKV +V+  + KP++KC+L VP +   S+ +F T +C++DY
Sbjct: 183 IRFKVGKVRVGKFKPQVKCELKVPMSSGTSSESFQTTKCELDY 225


>gb|AAF62403.1|AF212183_1 harpin inducing protein [Nicotiana tabacum]
           gi|22830759|dbj|BAC15623.1| hin1 [Nicotiana tabacum]
          Length = 229

 Score =  190 bits (483), Expect = 3e-46
 Identities = 101/224 (45%), Positives = 135/224 (60%), Gaps = 7/224 (3%)
 Frame = -1

Query: 865 LNGAFYGPSVPPQ-QSYHRHXXXXXXXXXXXXXXXXXF---KXXXXXXXXXXXVALVFWL 698
           LNGA+YGPS+PP  +SYHRH                     K           +ALV WL
Sbjct: 6   LNGAYYGPSIPPPAKSYHRHGRGSSCNPCSCLFGCLCNCFFKIIFTLLIILGVIALVLWL 65

Query: 697 IFRPTEVKFHVVDAXXXXXXXXXXXNQIRYNLALDMSVRNSNKRIGVYYDRIEARAYYEN 518
           + RP +VKF+V DA           N I Y+LAL+M++RN NKRIG+YYD IEARA Y+ 
Sbjct: 66  VLRPNKVKFYVTDATLTQFDLSTTNNTIFYDLALNMTIRNPNKRIGIYYDSIEARALYQG 125

Query: 517 ELFATTTLTPFYQGRKNTTMLRPVFQGTSPITLRDSEITTFDREKNDGNFNIDIRLYLRI 338
           E F +T L PFYQG KNT+ LRPVF+G S + L D E + ++ EKN G + ++++LY+RI
Sbjct: 126 ERFDSTNLEPFYQGHKNTSSLRPVFKGQSLVLLGDREKSNYNNEKNLGVYEMEVKLYMRI 185

Query: 337 RFKVNRVKTRRLKPKIKCDLNVPF---NRASTVAFNTKRCKIDY 215
           R KV  +KT ++KPKI+CD  VP     R+S+  F   RC +D+
Sbjct: 186 RLKVGWIKTHKIKPKIECDFKVPLGSNGRSSSANFEETRCHLDW 229


>ref|XP_002532540.1| syntaxin, plant, putative [Ricinus communis]
           gi|223527729|gb|EEF29834.1| syntaxin, plant, putative
           [Ricinus communis]
          Length = 219

 Score =  187 bits (475), Expect = 3e-45
 Identities = 98/221 (44%), Positives = 130/221 (58%)
 Frame = -1

Query: 877 KQPILNGAFYGPSVPPQQSYHRHXXXXXXXXXXXXXXXXXFKXXXXXXXXXXXVALVFWL 698
           KQ  LNGA+YGP++PP QSYHR                   K             L+FWL
Sbjct: 4   KQAQLNGAYYGPAIPPPQSYHR--PGRSGCGCGCCLLSCLLKIIITIAVVLGLAVLIFWL 61

Query: 697 IFRPTEVKFHVVDAXXXXXXXXXXXNQIRYNLALDMSVRNSNKRIGVYYDRIEARAYYEN 518
           + RP +VKFHV +A             + YNLAL+++VRN NK+IG+YYDRIEAR  YE+
Sbjct: 62  VVRPNKVKFHVTEANLSEFNINNNT--LHYNLALNITVRNPNKKIGIYYDRIEARGKYED 119

Query: 517 ELFATTTLTPFYQGRKNTTMLRPVFQGTSPITLRDSEITTFDREKNDGNFNIDIRLYLRI 338
           + F +  LTPFYQG KNT++L P FQG   + L   E+T F+ E+  G ++ID+ LYL+I
Sbjct: 120 QRFGSQFLTPFYQGHKNTSILTPAFQGQQLMLLSGDELTDFNEERVSGVYSIDVTLYLKI 179

Query: 337 RFKVNRVKTRRLKPKIKCDLNVPFNRASTVAFNTKRCKIDY 215
           RFK+  +K  + KPKI+C+L VP N +S V F    C  DY
Sbjct: 180 RFKIGDLKIGKFKPKIQCELKVPSN-SSAVPFQRTECDWDY 219


>dbj|BAD22534.1| harpin inducing protein 1-like 18 [Nicotiana tabacum]
          Length = 229

 Score =  187 bits (474), Expect = 4e-45
 Identities = 99/224 (44%), Positives = 133/224 (59%), Gaps = 7/224 (3%)
 Frame = -1

Query: 865 LNGAFYGPSVPPQ-QSYHRHXXXXXXXXXXXXXXXXXF---KXXXXXXXXXXXVALVFWL 698
           LNGA+YGPS+PP  +SYHRH                     K           +ALV WL
Sbjct: 6   LNGAYYGPSIPPPAKSYHRHGRGSSCNPCSCLFGCLCNCFFKIIFTLLIILGVIALVLWL 65

Query: 697 IFRPTEVKFHVVDAXXXXXXXXXXXNQIRYNLALDMSVRNSNKRIGVYYDRIEARAYYEN 518
           + RP +VKF+V DA           N I Y+LAL+M++RN NKRIG+YYD IEARA Y+ 
Sbjct: 66  VLRPNKVKFYVTDATLTQFDLSNTNNTIFYDLALNMTIRNPNKRIGIYYDSIEARAMYQG 125

Query: 517 ELFATTTLTPFYQGRKNTTMLRPVFQGTSPITLRDSEITTFDREKNDGNFNIDIRLYLRI 338
           E F +T L PFYQG KNT+ L PVF+G S + L D E + ++ EKN G + ++++LY+RI
Sbjct: 126 ERFHSTNLKPFYQGHKNTSSLHPVFKGQSLVLLGDREKSNYNNEKNLGVYEMEVKLYMRI 185

Query: 337 RFKVNRVKTRRLKPKIKCDLNVPF---NRASTVAFNTKRCKIDY 215
           R K   +KT ++KPKI+CD  VP     R+S+  F   RC +D+
Sbjct: 186 RLKAGWIKTHKIKPKIECDFKVPLESNGRSSSANFEETRCHLDW 229


>dbj|BAD11071.1| hin1 like protein [Capsicum chinense]
          Length = 228

 Score =  184 bits (468), Expect = 2e-44
 Identities = 96/223 (43%), Positives = 133/223 (59%), Gaps = 6/223 (2%)
 Frame = -1

Query: 865 LNGAFYGPSVPP-QQSYHRHXXXXXXXXXXXXXXXXXF---KXXXXXXXXXXXVALVFWL 698
           LNGA+YGPS+PP  +SYHRH                     +           +ALV WL
Sbjct: 6   LNGAYYGPSIPPPSKSYHRHGRGSSCNPCSCLFGCLCNCIFQIIFTILIVLGVIALVLWL 65

Query: 697 IFRPTEVKFHVVDAXXXXXXXXXXXNQIRYNLALDMSVRNSNKRIGVYYDRIEARAYYEN 518
           + RP +VKF+V DA           N + Y+LAL+M++RN NKRIG+YYD IEAR  Y+ 
Sbjct: 66  VLRPNKVKFYVTDATLTQFDLSTANNTLYYDLALNMTIRNPNKRIGIYYDSIEARGMYKG 125

Query: 517 ELFATTTLTPFYQGRKNTTMLRPVFQGTSPITLRDSEITTFDREKNDGNFNIDIRLYLRI 338
           E FA+  L PFYQG KNT+ L PV +G S + L D E + ++ EKN G ++I+++LY+RI
Sbjct: 126 ERFASQNLEPFYQGHKNTSSLHPVLKGQSLVLLGDREKSNYNNEKNSGVYDIEMKLYMRI 185

Query: 337 RFKVNRVKTRRLKPKIKCDLNVPF--NRASTVAFNTKRCKIDY 215
           R K+  +KT ++KPKI+CD+ VP   N  S+  F   RC +D+
Sbjct: 186 RLKIGWIKTHKIKPKIECDIKVPLESNGRSSANFEETRCHLDW 228


Top