BLASTX nr result

ID: Coptis23_contig00004265 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00004265
         (1803 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002509692.1| hydroxymethylglutaryl-CoA synthase, putative...   775   0.0  
ref|XP_002282434.1| PREDICTED: hydroxymethylglutaryl-CoA synthas...   771   0.0  
gb|AFC34137.1| 3-hydroxy-3-methylglutaryl-CoA synthase [Camellia...   771   0.0  
dbj|BAF98279.1| hydroxymethylglutaryl-CoA synthase [Hevea brasil...   766   0.0  
gb|AAS46245.1| HMG-CoA synthase 2 [Hevea brasiliensis]                766   0.0  

>ref|XP_002509692.1| hydroxymethylglutaryl-CoA synthase, putative [Ricinus communis]
            gi|223549591|gb|EEF51079.1| hydroxymethylglutaryl-CoA
            synthase, putative [Ricinus communis]
          Length = 464

 Score =  775 bits (2000), Expect = 0.0
 Identities = 374/462 (80%), Positives = 422/462 (91%)
 Frame = +2

Query: 218  KDVGILAMEIYFPLTCVQQEALEAHDGASKGKYTIGLGQDCMAFCTDVEDVVSMSLTAVS 397
            K+VGILA++IYFP TCVQQEALEAHDGASKGKYTIGLGQDCM FCT+VEDV+SMSLTAV+
Sbjct: 3    KNVGILALDIYFPPTCVQQEALEAHDGASKGKYTIGLGQDCMGFCTEVEDVISMSLTAVT 62

Query: 398  SLLEKYQIDPKQIGRLEVGSETVIDKSKSIKTFLMQIFEEQGNTDIEGVDSTNACYGGTA 577
            SLL+ Y IDPKQIGRLEVGSETVIDKSKSIKTFLMQIFE+ GNTDIEGVDS+NACYGGTA
Sbjct: 63   SLLDNYNIDPKQIGRLEVGSETVIDKSKSIKTFLMQIFEKHGNTDIEGVDSSNACYGGTA 122

Query: 578  ALFNVVNWVESRSWDGRYGLVVCTDSAVYAEGPARPTGGAAAIAMLIGPNAPIAFESKFR 757
            ALFN VNWVES SWDGRYGLVVCTDSAVYAEGPARPTGGAAAIAMLIGP+APIAFESK+R
Sbjct: 123  ALFNCVNWVESSSWDGRYGLVVCTDSAVYAEGPARPTGGAAAIAMLIGPDAPIAFESKYR 182

Query: 758  GSHMAHAYDFYKPNLASEYPVVDGKLSQTCYLMALDSCYKRFCAKYEKFQGKPFSISDAD 937
            GSHM+HAYDFYKPNLASEYPVVDGKLSQTCYLMALDSCYK FCAKYEKF+GK FSISDA+
Sbjct: 183  GSHMSHAYDFYKPNLASEYPVVDGKLSQTCYLMALDSCYKHFCAKYEKFEGKQFSISDAE 242

Query: 938  YVVFHSPYNKLVQKSFARLYYMDFLRNASSVEEAAKEKLAPFSSLSGDESYASRDLEKTA 1117
            Y VFHSPYNKLVQKSFARL + DF+RNASS++EAAKEKLAPFS+L+GDESY +RDLEK +
Sbjct: 243  YFVFHSPYNKLVQKSFARLVFNDFVRNASSIDEAAKEKLAPFSTLTGDESYQNRDLEKVS 302

Query: 1118 QQVAKSLYDAKVQPTTLIPKQVGNMYTXXXXXXXXXXIDSKHSTMDNKRVVMFSYGSGLS 1297
            QQVAK LYDAKVQPTTLIPKQVGNMYT          + +K+S +  KRV++FSYGSGL+
Sbjct: 303  QQVAKPLYDAKVQPTTLIPKQVGNMYTASLYAAFASLLHNKNSKLAGKRVILFSYGSGLT 362

Query: 1298 STMFAFRLQEGQYPFSLSNIATVMDISGKLKSRHEVSPEKFVKTLQLMEHRYGGKDFVTS 1477
            +TMF+ RL EGQ+PFSLSNIATVM+++ KLKSRHE SPEKFV+T++LMEHRYG KDFVTS
Sbjct: 363  ATMFSLRLHEGQHPFSLSNIATVMNVTDKLKSRHEFSPEKFVETMKLMEHRYGAKDFVTS 422

Query: 1478 KDHSLLPPGTFYLTQVDSLYRRFYSKKSQEDTCENGSVVNGH 1603
            +D SLL PGT+YLT+VD++YRRFY+KK  ++TCENG + +GH
Sbjct: 423  QDCSLLAPGTYYLTEVDTMYRRFYAKKLVDNTCENGLIADGH 464


>ref|XP_002282434.1| PREDICTED: hydroxymethylglutaryl-CoA synthase [Vitis vinifera]
            gi|297742614|emb|CBI34763.3| unnamed protein product
            [Vitis vinifera]
          Length = 464

 Score =  771 bits (1992), Expect = 0.0
 Identities = 376/462 (81%), Positives = 416/462 (90%)
 Frame = +2

Query: 218  KDVGILAMEIYFPLTCVQQEALEAHDGASKGKYTIGLGQDCMAFCTDVEDVVSMSLTAVS 397
            K+VGILAM+IYFP TCVQQEALE HDGASKGKYTIGLGQDCMAFC++VEDV+SMSLT V+
Sbjct: 3    KNVGILAMDIYFPPTCVQQEALEVHDGASKGKYTIGLGQDCMAFCSEVEDVISMSLTVVT 62

Query: 398  SLLEKYQIDPKQIGRLEVGSETVIDKSKSIKTFLMQIFEEQGNTDIEGVDSTNACYGGTA 577
            SLLEKY IDPKQIGRLEVGSETVIDKSKSIKTFLMQIFEE GN DIEGVDS+NACYGGTA
Sbjct: 63   SLLEKYGIDPKQIGRLEVGSETVIDKSKSIKTFLMQIFEECGNNDIEGVDSSNACYGGTA 122

Query: 578  ALFNVVNWVESRSWDGRYGLVVCTDSAVYAEGPARPTGGAAAIAMLIGPNAPIAFESKFR 757
            ALFN VNWVES SWDGRYGLVVCTDSAVYAEGPARPTGGAAAIAML+GP+APIAFESK R
Sbjct: 123  ALFNCVNWVESSSWDGRYGLVVCTDSAVYAEGPARPTGGAAAIAMLVGPDAPIAFESKLR 182

Query: 758  GSHMAHAYDFYKPNLASEYPVVDGKLSQTCYLMALDSCYKRFCAKYEKFQGKPFSISDAD 937
            GSHM+HAYDFYKPNLASEYPVVDGKLSQTCYLMALDSCYK  C+KYEK +GK FSI+DAD
Sbjct: 183  GSHMSHAYDFYKPNLASEYPVVDGKLSQTCYLMALDSCYKLLCSKYEKLEGKQFSIADAD 242

Query: 938  YVVFHSPYNKLVQKSFARLYYMDFLRNASSVEEAAKEKLAPFSSLSGDESYASRDLEKTA 1117
            Y VFHSPYNKLVQKSFARL + D +RNASSV+EA K+KL PFSSLSGDESY +RDLEK +
Sbjct: 243  YFVFHSPYNKLVQKSFARLVFNDVVRNASSVDEAGKQKLEPFSSLSGDESYQNRDLEKAS 302

Query: 1118 QQVAKSLYDAKVQPTTLIPKQVGNMYTXXXXXXXXXXIDSKHSTMDNKRVVMFSYGSGLS 1297
            QQVAK LYDAKVQP+TL+PKQVGNMYT          + +KHS +  KRVVMFSYGSGL+
Sbjct: 303  QQVAKPLYDAKVQPSTLLPKQVGNMYTASLYAAFVSVLHNKHSELSGKRVVMFSYGSGLT 362

Query: 1298 STMFAFRLQEGQYPFSLSNIATVMDISGKLKSRHEVSPEKFVKTLQLMEHRYGGKDFVTS 1477
            +TMF+F+L++GQ+PFSLSNIATVMD++GKLK+RHE  PEKFV+ L+LMEHRYG KDFVTS
Sbjct: 363  ATMFSFQLRDGQHPFSLSNIATVMDVAGKLKARHEFPPEKFVEILKLMEHRYGAKDFVTS 422

Query: 1478 KDHSLLPPGTFYLTQVDSLYRRFYSKKSQEDTCENGSVVNGH 1603
            KD SLLPPGT YLT+VDS+YRRFYSKK+   TCENGS+ NGH
Sbjct: 423  KDCSLLPPGTHYLTEVDSMYRRFYSKKAGSCTCENGSLANGH 464


>gb|AFC34137.1| 3-hydroxy-3-methylglutaryl-CoA synthase [Camellia sinensis]
          Length = 467

 Score =  771 bits (1990), Expect = 0.0
 Identities = 375/467 (80%), Positives = 416/467 (89%)
 Frame = +2

Query: 203  MDLNQKDVGILAMEIYFPLTCVQQEALEAHDGASKGKYTIGLGQDCMAFCTDVEDVVSMS 382
            M   QK+VGILA+EIYFP TCVQQEALEAHDG SKGKYTIGLGQDC+AFCT+VEDV+SMS
Sbjct: 1    MASQQKNVGILAVEIYFPPTCVQQEALEAHDGVSKGKYTIGLGQDCLAFCTEVEDVISMS 60

Query: 383  LTAVSSLLEKYQIDPKQIGRLEVGSETVIDKSKSIKTFLMQIFEEQGNTDIEGVDSTNAC 562
            LTAV+SLLEKY IDPKQIGRLEVGSETVIDKSKSIKTFLMQIFEE GNTDIEGVDSTNAC
Sbjct: 61   LTAVTSLLEKYGIDPKQIGRLEVGSETVIDKSKSIKTFLMQIFEETGNTDIEGVDSTNAC 120

Query: 563  YGGTAALFNVVNWVESRSWDGRYGLVVCTDSAVYAEGPARPTGGAAAIAMLIGPNAPIAF 742
            YGGTAAL N VNWVES SWDGRYGLVVCTDSAVYAEGPARPTGGAAAIAMLIGP+APIAF
Sbjct: 121  YGGTAALLNCVNWVESSSWDGRYGLVVCTDSAVYAEGPARPTGGAAAIAMLIGPDAPIAF 180

Query: 743  ESKFRGSHMAHAYDFYKPNLASEYPVVDGKLSQTCYLMALDSCYKRFCAKYEKFQGKPFS 922
            ESK RGSHM+H YDFY+PNLASEYPVVDGKLSQTCYLMA+DSCY R C KYEKF+GK FS
Sbjct: 181  ESKIRGSHMSHVYDFYRPNLASEYPVVDGKLSQTCYLMAVDSCYNRLCNKYEKFEGKQFS 240

Query: 923  ISDADYVVFHSPYNKLVQKSFARLYYMDFLRNASSVEEAAKEKLAPFSSLSGDESYASRD 1102
            ++DADY VFHSPYNKLVQKSFARL + DFLRNASS+ EAAKEKLAPFS+L+GDESY SRD
Sbjct: 241  VNDADYFVFHSPYNKLVQKSFARLLFNDFLRNASSINEAAKEKLAPFSTLTGDESYQSRD 300

Query: 1103 LEKTAQQVAKSLYDAKVQPTTLIPKQVGNMYTXXXXXXXXXXIDSKHSTMDNKRVVMFSY 1282
            LEK  QQVAK+LYDAKVQPTTL+PKQVGNMYT          I  KHS++  +R+VMFSY
Sbjct: 301  LEKATQQVAKALYDAKVQPTTLVPKQVGNMYTASLYAAFASLIHKKHSSLVGQRIVMFSY 360

Query: 1283 GSGLSSTMFAFRLQEGQYPFSLSNIATVMDISGKLKSRHEVSPEKFVKTLQLMEHRYGGK 1462
            GSGL++TMF+FR++E Q+PFSLSNIA VM++  KLKSRHE  PEKFV+T+++MEHRYG K
Sbjct: 361  GSGLTATMFSFRVRECQHPFSLSNIAAVMNVDKKLKSRHEFPPEKFVETMKVMEHRYGAK 420

Query: 1463 DFVTSKDHSLLPPGTFYLTQVDSLYRRFYSKKSQEDTCENGSVVNGH 1603
            DFVTSKD SLL PGT+YLT+VDS+YRRFY+KK+    CENGS+ NGH
Sbjct: 421  DFVTSKDCSLLAPGTYYLTEVDSMYRRFYAKKASTTACENGSLTNGH 467


>dbj|BAF98279.1| hydroxymethylglutaryl-CoA synthase [Hevea brasiliensis]
          Length = 464

 Score =  766 bits (1978), Expect = 0.0
 Identities = 373/462 (80%), Positives = 416/462 (90%)
 Frame = +2

Query: 218  KDVGILAMEIYFPLTCVQQEALEAHDGASKGKYTIGLGQDCMAFCTDVEDVVSMSLTAVS 397
            K+VGILAM+IYFP T VQQEALEAHDGASKGKYTIGLGQDCM FCT+VEDV+SMSLTAV+
Sbjct: 3    KNVGILAMDIYFPPTYVQQEALEAHDGASKGKYTIGLGQDCMPFCTEVEDVISMSLTAVT 62

Query: 398  SLLEKYQIDPKQIGRLEVGSETVIDKSKSIKTFLMQIFEEQGNTDIEGVDSTNACYGGTA 577
            SLL+KY IDPKQIGRLEVGSETVIDKSKSIKTFLMQIFE+ GNTDIEGVDSTNACYGGTA
Sbjct: 63   SLLDKYNIDPKQIGRLEVGSETVIDKSKSIKTFLMQIFEKFGNTDIEGVDSTNACYGGTA 122

Query: 578  ALFNVVNWVESRSWDGRYGLVVCTDSAVYAEGPARPTGGAAAIAMLIGPNAPIAFESKFR 757
            ALFN VNWVES SWDGRYGLVVCTDSAVYAEGPARPTGGAAAIAMLIGP APIAFESKFR
Sbjct: 123  ALFNCVNWVESSSWDGRYGLVVCTDSAVYAEGPARPTGGAAAIAMLIGPEAPIAFESKFR 182

Query: 758  GSHMAHAYDFYKPNLASEYPVVDGKLSQTCYLMALDSCYKRFCAKYEKFQGKPFSISDAD 937
            GSHM+HAYDFYKPNLASEYPVVDGKLSQTCYLMALDSCYK FCAKYEK +GK FSISDA+
Sbjct: 183  GSHMSHAYDFYKPNLASEYPVVDGKLSQTCYLMALDSCYKHFCAKYEKLEGKQFSISDAE 242

Query: 938  YVVFHSPYNKLVQKSFARLYYMDFLRNASSVEEAAKEKLAPFSSLSGDESYASRDLEKTA 1117
            Y VFHSPYNKLVQKSFARL + DF+RNASS+++AAKEKLAPFS+LSGDESY +RDLEK +
Sbjct: 243  YFVFHSPYNKLVQKSFARLVFNDFVRNASSIDDAAKEKLAPFSTLSGDESYQNRDLEKVS 302

Query: 1118 QQVAKSLYDAKVQPTTLIPKQVGNMYTXXXXXXXXXXIDSKHSTMDNKRVVMFSYGSGLS 1297
            QQVAK LYDAKVQPTTLIPKQVGNMYT          + +KH+ +  KRV++FSYGSGL+
Sbjct: 303  QQVAKPLYDAKVQPTTLIPKQVGNMYTASLYAAFASLLHNKHTELAGKRVILFSYGSGLT 362

Query: 1298 STMFAFRLQEGQYPFSLSNIATVMDISGKLKSRHEVSPEKFVKTLQLMEHRYGGKDFVTS 1477
            +TMF+ RL EGQ+PFSLSNIATVM+++GKLK+RHE  PEKF   ++LMEHRYG KDFVTS
Sbjct: 363  ATMFSLRLHEGQHPFSLSNIATVMNVAGKLKTRHEFPPEKFAVIMKLMEHRYGAKDFVTS 422

Query: 1478 KDHSLLPPGTFYLTQVDSLYRRFYSKKSQEDTCENGSVVNGH 1603
            KD S+L PGT+YLT+VD++YRRFY++K+  DT ENG + NGH
Sbjct: 423  KDCSILAPGTYYLTEVDTMYRRFYAQKAVGDTVENGLLANGH 464


>gb|AAS46245.1| HMG-CoA synthase 2 [Hevea brasiliensis]
          Length = 464

 Score =  766 bits (1977), Expect = 0.0
 Identities = 373/462 (80%), Positives = 415/462 (89%)
 Frame = +2

Query: 218  KDVGILAMEIYFPLTCVQQEALEAHDGASKGKYTIGLGQDCMAFCTDVEDVVSMSLTAVS 397
            K+VGILAM+IYFP T VQQEALEAHDGASKGKYTIGLGQDCMAFCT+VEDV+SMSLTAV+
Sbjct: 3    KNVGILAMDIYFPPTYVQQEALEAHDGASKGKYTIGLGQDCMAFCTEVEDVISMSLTAVT 62

Query: 398  SLLEKYQIDPKQIGRLEVGSETVIDKSKSIKTFLMQIFEEQGNTDIEGVDSTNACYGGTA 577
            SLLEKY IDP QIGRLEVGSETVIDKSKSIKTFLMQIFE+ GNTDIEGVDS NACYGGTA
Sbjct: 63   SLLEKYNIDPNQIGRLEVGSETVIDKSKSIKTFLMQIFEKFGNTDIEGVDSANACYGGTA 122

Query: 578  ALFNVVNWVESRSWDGRYGLVVCTDSAVYAEGPARPTGGAAAIAMLIGPNAPIAFESKFR 757
            ALFN VNWVES SWDGRYGLVVCTDSAVYAEGPARPTGGAAAIAMLIGP APIAFESKFR
Sbjct: 123  ALFNCVNWVESNSWDGRYGLVVCTDSAVYAEGPARPTGGAAAIAMLIGPEAPIAFESKFR 182

Query: 758  GSHMAHAYDFYKPNLASEYPVVDGKLSQTCYLMALDSCYKRFCAKYEKFQGKPFSISDAD 937
            GSHM+HAYDFYKPNLASEYPVVDGKLSQTCYLMALDSCYK FCAKYEK +GK FSISDA+
Sbjct: 183  GSHMSHAYDFYKPNLASEYPVVDGKLSQTCYLMALDSCYKHFCAKYEKLEGKQFSISDAE 242

Query: 938  YVVFHSPYNKLVQKSFARLYYMDFLRNASSVEEAAKEKLAPFSSLSGDESYASRDLEKTA 1117
            Y VFHSPYNKLVQKSFARL + DF+RNASS+++AAKEKLAPFS+LSGDESY +RDLEK +
Sbjct: 243  YFVFHSPYNKLVQKSFARLVFNDFVRNASSIDDAAKEKLAPFSTLSGDESYQNRDLEKVS 302

Query: 1118 QQVAKSLYDAKVQPTTLIPKQVGNMYTXXXXXXXXXXIDSKHSTMDNKRVVMFSYGSGLS 1297
            QQVAK LYDAKVQPTTLIPKQVGNMYT          + +KH+ +  KRV++FSYGSGL+
Sbjct: 303  QQVAKPLYDAKVQPTTLIPKQVGNMYTASLYAAFASLLHNKHTELAGKRVILFSYGSGLT 362

Query: 1298 STMFAFRLQEGQYPFSLSNIATVMDISGKLKSRHEVSPEKFVKTLQLMEHRYGGKDFVTS 1477
            +TMF+ RL EGQ+PFSLSNIATVM+++GKLK+RHE  PEKF   ++LMEHRYG KDFVTS
Sbjct: 363  ATMFSLRLHEGQHPFSLSNIATVMNVAGKLKTRHEFPPEKFAVIMKLMEHRYGAKDFVTS 422

Query: 1478 KDHSLLPPGTFYLTQVDSLYRRFYSKKSQEDTCENGSVVNGH 1603
            KD S+L PGT+YLT+VD++YRRFY++K+  DT ENG + NGH
Sbjct: 423  KDCSILAPGTYYLTEVDTMYRRFYAQKAVGDTVENGLLANGH 464


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