BLASTX nr result

ID: Coptis23_contig00004257 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00004257
         (529 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002270511.1| PREDICTED: uncharacterized protein LOC100244...    67   2e-09
ref|XP_002526559.1| transcription factor, putative [Ricinus comm...    66   3e-09

>ref|XP_002270511.1| PREDICTED: uncharacterized protein LOC100244545 [Vitis vinifera]
          Length = 517

 Score = 67.0 bits (162), Expect = 2e-09
 Identities = 35/65 (53%), Positives = 46/65 (70%)
 Frame = -3

Query: 197 LSIQGSGKKQLADVGISVAMSSSVPVYPISQEKKHPQWPDSQQVSLEREMMTNSMLPHST 18
           LSI+GSG KQL ++G S A+SSS+ V P S E+ HP+ PDSQQV + RE+MT     H++
Sbjct: 7   LSIRGSGSKQLNNLGASGALSSSLSVLPTSLEETHPKLPDSQQVYVGREIMTRPQAMHAS 66

Query: 17  LLASN 3
            L SN
Sbjct: 67  PLPSN 71


>ref|XP_002526559.1| transcription factor, putative [Ricinus communis]
           gi|223534120|gb|EEF35837.1| transcription factor,
           putative [Ricinus communis]
          Length = 491

 Score = 66.2 bits (160), Expect = 3e-09
 Identities = 36/71 (50%), Positives = 53/71 (74%), Gaps = 1/71 (1%)
 Frame = -3

Query: 212 MEVRP-LSIQGSGKKQLADVGISVAMSSSVPVYPISQEKKHPQWPDSQQVSLEREMMTNS 36
           ME RP LSIQ SG KQL+++G+S A+SSS PV P S+E+ +P+  D+QQV++E+ +MT  
Sbjct: 1   MEARPTLSIQRSGVKQLSNLGVSGALSSSYPVLPTSREETYPKLSDAQQVAMEKGLMTRP 60

Query: 35  MLPHSTLLASN 3
           ++ H+  L SN
Sbjct: 61  LV-HTNHLPSN 70


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