BLASTX nr result

ID: Coptis23_contig00004253 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00004253
         (885 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002321224.1| predicted protein [Populus trichocarpa] gi|2...   114   3e-23
ref|XP_002863218.1| hypothetical protein ARALYDRAFT_333056 [Arab...    94   6e-22
emb|CAB40994.1| auxilin-like protein [Arabidopsis thaliana] gi|7...    90   1e-20
emb|CBI21587.3| unnamed protein product [Vitis vinifera]               97   4e-18
ref|XP_002275766.1| PREDICTED: auxilin-related protein 2-like [V...    97   4e-18

>ref|XP_002321224.1| predicted protein [Populus trichocarpa] gi|222861997|gb|EEE99539.1|
            predicted protein [Populus trichocarpa]
          Length = 941

 Score =  114 bits (285), Expect = 3e-23
 Identities = 69/136 (50%), Positives = 81/136 (59%)
 Frame = +1

Query: 88   EVLRHLENSRTLRGKLKKDEERDWIATNVHRSAQSVEISFSLFVCVYDYLYLSSYKCRKP 267
            EVL HLE+S+ L+GKLKK E+ DW AT   RS   V         ++D + L+       
Sbjct: 775  EVLDHLESSKMLKGKLKKGEKPDWNATRGLRSGLYV---------LHDMILLT------- 818

Query: 268  IQVH*LVSY*ILLTSFLWSLCPQAKALAEKNERDRQTQRDQAERHRFAETLDVEIKRWSA 447
                                   AKALAEKN+RD Q QRDQAERHR AETLDVEIKRW+A
Sbjct: 819  -----------------------AKALAEKNQRDLQAQRDQAERHRIAETLDVEIKRWAA 855

Query: 448  GKQGNLRALLSTLQYI 495
            GK+GNLRALLSTLQY+
Sbjct: 856  GKEGNLRALLSTLQYV 871


>ref|XP_002863218.1| hypothetical protein ARALYDRAFT_333056 [Arabidopsis lyrata subsp.
            lyrata] gi|297309052|gb|EFH39477.1| hypothetical protein
            ARALYDRAFT_333056 [Arabidopsis lyrata subsp. lyrata]
          Length = 920

 Score = 94.4 bits (233), Expect(2) = 6e-22
 Identities = 59/134 (44%), Positives = 72/134 (53%)
 Frame = +1

Query: 94   LRHLENSRTLRGKLKKDEERDWIATNVHRSAQSVEISFSLFVCVYDYLYLSSYKCRKPIQ 273
            L +L   + L  KLK+D+   W AT  HRS     + +++                    
Sbjct: 752  LPNLVGFKMLMEKLKRDDVPGWNATRGHRSGLFASMFYNM-------------------- 791

Query: 274  VH*LVSY*ILLTSFLWSLCPQAKALAEKNERDRQTQRDQAERHRFAETLDVEIKRWSAGK 453
                        SFL     QAKALAEKNERD Q QR+QAE+ R  ETLDVEI+RW AGK
Sbjct: 792  -----------NSFL----NQAKALAEKNERDLQVQREQAEKDRIGETLDVEIRRWGAGK 836

Query: 454  QGNLRALLSTLQYI 495
            +GNLRALLSTLQY+
Sbjct: 837  EGNLRALLSTLQYV 850



 Score = 36.6 bits (83), Expect(2) = 6e-22
 Identities = 17/22 (77%), Positives = 20/22 (90%)
 Frame = +3

Query: 39  KASSTTNIVDDLTSIFGGASSS 104
           KASS TNIVDDL+SIFGG++ S
Sbjct: 729 KASSVTNIVDDLSSIFGGSAIS 750


>emb|CAB40994.1| auxilin-like protein [Arabidopsis thaliana]
            gi|7267978|emb|CAB78319.1| auxilin-like protein
            [Arabidopsis thaliana]
          Length = 909

 Score = 90.1 bits (222), Expect(2) = 1e-20
 Identities = 57/134 (42%), Positives = 70/134 (52%)
 Frame = +1

Query: 94   LRHLENSRTLRGKLKKDEERDWIATNVHRSAQSVEISFSLFVCVYDYLYLSSYKCRKPIQ 273
            L +L   + L  KLK+D+   W  T  HRS     + +++                    
Sbjct: 741  LPNLVGFKMLMEKLKRDDVPGWNVTRGHRSGLFASMFYNM-------------------- 780

Query: 274  VH*LVSY*ILLTSFLWSLCPQAKALAEKNERDRQTQRDQAERHRFAETLDVEIKRWSAGK 453
                        SFL     QAKALAEKNERD Q QR+QAE+ R   TLDVEI+RW AGK
Sbjct: 781  -----------NSFL----NQAKALAEKNERDLQVQREQAEKDRIGGTLDVEIRRWGAGK 825

Query: 454  QGNLRALLSTLQYI 495
            +GNLRALLSTLQY+
Sbjct: 826  EGNLRALLSTLQYV 839



 Score = 36.6 bits (83), Expect(2) = 1e-20
 Identities = 17/22 (77%), Positives = 20/22 (90%)
 Frame = +3

Query: 39  KASSTTNIVDDLTSIFGGASSS 104
           KASS TNIVDDL+SIFGG++ S
Sbjct: 718 KASSATNIVDDLSSIFGGSAIS 739


>emb|CBI21587.3| unnamed protein product [Vitis vinifera]
          Length = 217

 Score = 97.4 bits (241), Expect = 4e-18
 Identities = 47/53 (88%), Positives = 50/53 (94%)
 Frame = +1

Query: 337 AKALAEKNERDRQTQRDQAERHRFAETLDVEIKRWSAGKQGNLRALLSTLQYI 495
           AKALAEKN+RD Q QRDQAERHR AETLDVEIKRWSAGK+GNLRALLSTLQY+
Sbjct: 95  AKALAEKNQRDLQAQRDQAERHRIAETLDVEIKRWSAGKEGNLRALLSTLQYV 147



 Score = 89.0 bits (219), Expect = 1e-15
 Identities = 43/50 (86%), Positives = 48/50 (96%)
 Frame = +3

Query: 39  KASSTTNIVDDLTSIFGGASSSGEFQDVEGETEERRRARLDRHQRTQERA 188
           KASSTTNIVDDL+SIFG A SSG+FQDVEGE+E+RRRARL+RHQRTQERA
Sbjct: 45  KASSTTNIVDDLSSIFGAAPSSGDFQDVEGESEDRRRARLERHQRTQERA 94


>ref|XP_002275766.1| PREDICTED: auxilin-related protein 2-like [Vitis vinifera]
          Length = 949

 Score = 97.4 bits (241), Expect = 4e-18
 Identities = 47/53 (88%), Positives = 50/53 (94%)
 Frame = +1

Query: 337 AKALAEKNERDRQTQRDQAERHRFAETLDVEIKRWSAGKQGNLRALLSTLQYI 495
           AKALAEKN+RD Q QRDQAERHR AETLDVEIKRWSAGK+GNLRALLSTLQY+
Sbjct: 827 AKALAEKNQRDLQAQRDQAERHRIAETLDVEIKRWSAGKEGNLRALLSTLQYV 879



 Score = 89.0 bits (219), Expect = 1e-15
 Identities = 43/50 (86%), Positives = 48/50 (96%)
 Frame = +3

Query: 39  KASSTTNIVDDLTSIFGGASSSGEFQDVEGETEERRRARLDRHQRTQERA 188
           KASSTTNIVDDL+SIFG A SSG+FQDVEGE+E+RRRARL+RHQRTQERA
Sbjct: 777 KASSTTNIVDDLSSIFGAAPSSGDFQDVEGESEDRRRARLERHQRTQERA 826


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