BLASTX nr result

ID: Coptis23_contig00004247 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00004247
         (854 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002271765.1| PREDICTED: uncharacterized protein LOC100240...   277   2e-72
ref|XP_003550310.1| PREDICTED: uncharacterized protein LOC100798...   264   2e-68
ref|XP_003529564.1| PREDICTED: uncharacterized protein LOC100778...   257   2e-66
ref|XP_002516928.1| kif4, putative [Ricinus communis] gi|2235440...   255   8e-66
ref|XP_002314383.1| predicted protein [Populus trichocarpa] gi|2...   255   8e-66

>ref|XP_002271765.1| PREDICTED: uncharacterized protein LOC100240940 [Vitis vinifera]
           gi|297736848|emb|CBI26049.3| unnamed protein product
           [Vitis vinifera]
          Length = 815

 Score =  277 bits (708), Expect = 2e-72
 Identities = 167/276 (60%), Positives = 178/276 (64%), Gaps = 4/276 (1%)
 Frame = +1

Query: 37  MGGHMQQXXXXXXXXXXXXXXXXX-GAGPNNSDAGDAVMARWLQSAGLQHLASPLASTTG 213
           MGG MQQ                   AGP  SDAGDAVMARWLQSAGLQHLASPLAST G
Sbjct: 1   MGGQMQQSNAAATALYDHPGGGTLHNAGPA-SDAGDAVMARWLQSAGLQHLASPLAST-G 58

Query: 214 IDHRFLPNLLMQGYGAQSAEEXXXXXXXXXXXXXXGESGSEPYTPTVQSSGTV--DGFYS 387
           IDHR LPNLLMQGYGAQSAEE              GESGSEPYTPT Q+SG V  +GFYS
Sbjct: 59  IDHRLLPNLLMQGYGAQSAEEKQRLFKLMRNLNFNGESGSEPYTPTAQTSGVVASEGFYS 118

Query: 388 PELRGDFGAGLLDLHAMDDTELLLTEHVXXXXXXXXXXXXXXXXXXXXLLTEHVXXXXXX 567
           PE RGDFGAGLLDLHAMDDTELL                           +EHV      
Sbjct: 119 PEFRGDFGAGLLDLHAMDDTELL---------------------------SEHVISEPFE 151

Query: 568 XXXXXXXVTRGFDNDFDAETSRQQRGQV-ADVSNRLQTNEKEITTKESNLAKIKVVVRKR 744
                   TR FDNDF+  TSRQQ+GQ  AD S     NEKE  TKE+N+AKIKVVVRKR
Sbjct: 152 PSPFMPGATRAFDNDFNVMTSRQQKGQTEADPSVGFLANEKE-NTKENNVAKIKVVVRKR 210

Query: 745 PLNKKELSRKEDDVVSVYESAYLTVHEPKLKVDLTA 852
           PLNKKELSRKEDD+V+V ++AYLTVHEPKLKVDLTA
Sbjct: 211 PLNKKELSRKEDDIVTVSDNAYLTVHEPKLKVDLTA 246


>ref|XP_003550310.1| PREDICTED: uncharacterized protein LOC100798612 [Glycine max]
          Length = 815

 Score =  264 bits (675), Expect = 2e-68
 Identities = 157/276 (56%), Positives = 178/276 (64%), Gaps = 4/276 (1%)
 Frame = +1

Query: 37  MGGHMQQXXXXXXXXXXXXXXXXX--GAGPNNSDAGDAVMARWLQSAGLQHLASPLASTT 210
           MGG MQQ                    AGP  +DAGDAVMARWLQSAGLQHLASPLAST 
Sbjct: 1   MGGQMQQSNASATALYDHAGPGSLHNAAGPA-TDAGDAVMARWLQSAGLQHLASPLASTA 59

Query: 211 GIDHRFLPNLLMQGYGAQSAEEXXXXXXXXXXXXXXGESGSEPYTPTVQSSGTV-DGFYS 387
            ID R LPNLLMQGYGAQSAEE              GESGSEPYTPT Q+ G V DGFYS
Sbjct: 60  -IDQRLLPNLLMQGYGAQSAEEKQRLSKLMRNLNFNGESGSEPYTPTSQNLGVVSDGFYS 118

Query: 388 PELRGDFGAGLLDLHAMDDTELLLTEHVXXXXXXXXXXXXXXXXXXXXLLTEHVXXXXXX 567
           P+ RGDFGAGLLDLHAMDDTELL                           +EHV      
Sbjct: 119 PDFRGDFGAGLLDLHAMDDTELL---------------------------SEHVISEPFE 151

Query: 568 XXXXXXXVTRGFDNDFDAETSRQQRGQV-ADVSNRLQTNEKEITTKESNLAKIKVVVRKR 744
                   TRGF +DF++ + +Q+RG+  +D S  L TNEKE  T+E+N+AKIKVVVRKR
Sbjct: 152 PSPFMPGGTRGFVDDFNSISRKQERGEADSDASLFLPTNEKENNTRENNVAKIKVVVRKR 211

Query: 745 PLNKKELSRKEDDVVSVYESAYLTVHEPKLKVDLTA 852
           PLNKKEL++KEDD+V+VY++AYLTVHEPKLKVDLTA
Sbjct: 212 PLNKKELAKKEDDIVTVYDNAYLTVHEPKLKVDLTA 247


>ref|XP_003529564.1| PREDICTED: uncharacterized protein LOC100778915 [Glycine max]
          Length = 814

 Score =  257 bits (657), Expect = 2e-66
 Identities = 155/278 (55%), Positives = 177/278 (63%), Gaps = 6/278 (2%)
 Frame = +1

Query: 37  MGGHMQQXXXXXXXXXXXXXXXXX--GAGPNNSDAGDAVMARWLQSAGLQHLASPLASTT 210
           MGG MQQ                    AGP  +DAGDAVMARWLQSAGLQHLASPLAST 
Sbjct: 1   MGGQMQQSNAAATALYDHAGAGSLHYAAGPA-TDAGDAVMARWLQSAGLQHLASPLASTA 59

Query: 211 GIDHRFLPNLLMQGYGAQSAEEXXXXXXXXXXXXXXGESGSEPYTPTVQSSGTV---DGF 381
            ID R LPNLLMQGYGAQSAEE              GESGSEPYTPT Q+ G V   DGF
Sbjct: 60  -IDQRLLPNLLMQGYGAQSAEEKQRLFKLMRNLNFNGESGSEPYTPTSQNLGGVAVSDGF 118

Query: 382 YSPELRGDFGAGLLDLHAMDDTELLLTEHVXXXXXXXXXXXXXXXXXXXXLLTEHVXXXX 561
           YSP+ RGDFGAGLLDLHAMDDTELL                           +EHV    
Sbjct: 119 YSPDFRGDFGAGLLDLHAMDDTELL---------------------------SEHVISEP 151

Query: 562 XXXXXXXXXVTRGFDNDFDAETSRQQRGQV-ADVSNRLQTNEKEITTKESNLAKIKVVVR 738
                     +RGF++DF+    +Q+RG+  +D S  L TNEK+  T+E+N+AKIKVVVR
Sbjct: 152 FEPSPFMPGGSRGFEDDFNPINRKQERGEADSDASLFLPTNEKD-NTRENNVAKIKVVVR 210

Query: 739 KRPLNKKELSRKEDDVVSVYESAYLTVHEPKLKVDLTA 852
           KRPLNKKEL++KEDD+V+VY++AYLTVHEPKLKVDLTA
Sbjct: 211 KRPLNKKELAKKEDDIVTVYDNAYLTVHEPKLKVDLTA 248


>ref|XP_002516928.1| kif4, putative [Ricinus communis] gi|223544016|gb|EEF45542.1| kif4,
           putative [Ricinus communis]
          Length = 823

 Score =  255 bits (652), Expect = 8e-66
 Identities = 157/285 (55%), Positives = 177/285 (62%), Gaps = 13/285 (4%)
 Frame = +1

Query: 37  MGGHMQQXXXXXXXXXXXXXXXXXG---------AGPNNSDAGDAVMARWLQSAGLQHLA 189
           MGG MQQ                 G         AGP  SDAGDAVMARWLQSAGLQHLA
Sbjct: 1   MGGQMQQSNAAAAAAATALYDHAAGGAGGGPLHNAGPT-SDAGDAVMARWLQSAGLQHLA 59

Query: 190 SPLASTTGIDHRFLPNLLMQGYGAQSAEEXXXXXXXXXXXXXXGESGSEPYTPTVQSSGT 369
           SPLAST  ID+R LPNLLMQGYGAQSAEE              GESGSEPYTPT+Q+S  
Sbjct: 60  SPLASTAAIDNRLLPNLLMQGYGAQSAEEKQRLFKLMRNLNFNGESGSEPYTPTMQTSAG 119

Query: 370 V---DGFYSPELRGDFGAGLLDLHAMDDTELLLTEHVXXXXXXXXXXXXXXXXXXXXLLT 540
           +   D FYSPE RGDFGAGLLDLHAMDDTELL                           +
Sbjct: 120 MAGSDSFYSPEFRGDFGAGLLDLHAMDDTELL---------------------------S 152

Query: 541 EHVXXXXXXXXXXXXXVTRGFDNDFDAETSRQQRGQV-ADVSNRLQTNEKEITTKESNLA 717
           EHV              ++GFDNDF+  +SRQQR Q   D S    TN+K+ +T+E+N+A
Sbjct: 153 EHVISEPFEPSPFMPGSSKGFDNDFNVASSRQQREQSDPDPSVAFITNDKD-STRENNVA 211

Query: 718 KIKVVVRKRPLNKKELSRKEDDVVSVYESAYLTVHEPKLKVDLTA 852
           KIKVVVRKRPLNKKE++RKEDD+VSV ++A LTVHEPKLKVDLTA
Sbjct: 212 KIKVVVRKRPLNKKEIARKEDDIVSVSDNA-LTVHEPKLKVDLTA 255


>ref|XP_002314383.1| predicted protein [Populus trichocarpa] gi|222863423|gb|EEF00554.1|
           predicted protein [Populus trichocarpa]
          Length = 814

 Score =  255 bits (652), Expect = 8e-66
 Identities = 151/276 (54%), Positives = 176/276 (63%), Gaps = 4/276 (1%)
 Frame = +1

Query: 37  MGGHMQQXXXXXXXXXXXXXXXXXGAGPNNSDAGDAVMARWLQSAGLQHLASPLASTTGI 216
           MGG MQQ                 G+   ++DAGDAV ARWLQSAGLQHLASPLAST GI
Sbjct: 1   MGGKMQQTNASAASTALYDHAAAGGSLGPSADAGDAVTARWLQSAGLQHLASPLAST-GI 59

Query: 217 DHRFLPNLLMQGYGAQSAEEXXXXXXXXXXXXXXGESGSEPYTPTVQSSGTV---DGFYS 387
           DHR LP++LMQGYGAQSAEE              GE+ SEPY P+ Q+S  V   DGFYS
Sbjct: 60  DHRLLPHILMQGYGAQSAEEKQRLFKLMRNLNFNGEAVSEPYIPSAQTSTGVSASDGFYS 119

Query: 388 PELRGDFGAGLLDLHAMDDTELLLTEHVXXXXXXXXXXXXXXXXXXXXLLTEHVXXXXXX 567
           P+ RGDFGAGLLDLHAMDDTELL                           +EH       
Sbjct: 120 PDFRGDFGAGLLDLHAMDDTELL---------------------------SEHAISEPFD 152

Query: 568 XXXXXXXVTRGFDNDFDAETSRQQRGQV-ADVSNRLQTNEKEITTKESNLAKIKVVVRKR 744
                  V++GF+NDF+  +SRQQR Q  AD+S    TNEKE +TKE+N+AKIKVVVRKR
Sbjct: 153 PSPLMPGVSKGFENDFNLTSSRQQREQTDADLSVPFPTNEKENSTKENNVAKIKVVVRKR 212

Query: 745 PLNKKELSRKEDDVVSVYESAYLTVHEPKLKVDLTA 852
           PLNKKEL+RKEDD+V+VY++A L VHEP+LKVDLTA
Sbjct: 213 PLNKKELARKEDDIVTVYDNA-LAVHEPRLKVDLTA 247


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