BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00004243
         (1271 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002514915.1| conserved hypothetical protein [Ricinus comm...   500   e-139
ref|XP_002271442.1| PREDICTED: F-box protein At1g67340-like [Vit...   492   e-137
ref|XP_004135325.1| PREDICTED: F-box protein At1g67340-like [Cuc...   491   e-136
ref|XP_002304680.1| predicted protein [Populus trichocarpa] gi|2...   491   e-136
ref|XP_002297844.1| predicted protein [Populus trichocarpa] gi|2...   489   e-136

>ref|XP_002514915.1| conserved hypothetical protein [Ricinus communis]
            gi|223545966|gb|EEF47469.1| conserved hypothetical
            protein [Ricinus communis]
          Length = 394

 Score =  500 bits (1288), Expect = e-139
 Identities = 236/314 (75%), Positives = 261/314 (83%), Gaps = 4/314 (1%)
 Frame = -2

Query: 1261 NKLDFFDGIPDDLVVSIFCKLSATADCPSDFFNALITCKRFYGLGLHPLVLMKTSPKAFT 1082
            +K DFF  +PDDLV  I CKLS++A CPSDF N L TCKR  GLGL+ +VL K SPK F 
Sbjct: 57   DKTDFFYALPDDLVTCILCKLSSSASCPSDFVNVLATCKRLNGLGLNSIVLSKASPKTFA 116

Query: 1081 AKAKNWSESAHKFLKQCMDAGNIEASYTLGMIRFYSLENRGSGASLMAKAAISSHARALY 902
             KAKNWS+SAH+FLK C DAGN+EA YTLGMIRFY L+NRGSGASLMAKAAISSHA ALY
Sbjct: 117  LKAKNWSDSAHRFLKLCADAGNVEACYTLGMIRFYCLQNRGSGASLMAKAAISSHAPALY 176

Query: 901  SLAVIQFNGSGGTKNDKDLRAGVALCARAAFLGHIDALRELGHCLQDGYGVRQNVAEGRR 722
            SLAVIQFNGSGG+KNDKDLRAGVALCARAAFLGHIDALRELGHCLQDGYGVRQN+AEGRR
Sbjct: 177  SLAVIQFNGSGGSKNDKDLRAGVALCARAAFLGHIDALRELGHCLQDGYGVRQNIAEGRR 236

Query: 721  YLVQANARELNSVLGKTSPSSNLGPWSTWHP----NHRNIPGSGCPLLSDYGCNVPAPEP 554
            +LVQANAREL +VL   +   N   W  W+P    NHR+  G GCPLLSD+GCNVPAPE 
Sbjct: 237  FLVQANARELAAVLSNPNSDLNTRAWVNWNPHAHSNHRHASGPGCPLLSDFGCNVPAPEA 296

Query: 553  HPASQFLGDWFELKGGVPGEGLRLCSHDGCGRPETRRHEFRRCSVCGEVNYCSRACQALD 374
            HPAS+F+ DWF  +GG PG+GLRLCSH GCGRPETR+HEFRRCSVCG VNYCSRACQALD
Sbjct: 297  HPASRFMADWFATRGGSPGQGLRLCSHVGCGRPETRKHEFRRCSVCGAVNYCSRACQALD 356

Query: 373  WKMRHKFNCTPVNQ 332
            WK+RHK  C PV +
Sbjct: 357  WKLRHKEECAPVER 370


>ref|XP_002271442.1| PREDICTED: F-box protein At1g67340-like [Vitis vinifera]
          Length = 385

 Score =  492 bits (1267), Expect = e-137
 Identities = 235/315 (74%), Positives = 263/315 (83%), Gaps = 2/315 (0%)
 Frame = -2

Query: 1270 QEVNKLDFFDGIPDDLVVSIFCKLSATADCPSDFFNALITCKRFYGLGLHPLVLMKTSPK 1091
            +   K DFF+ +PDDLV+ I  KLS++A CPSDF N L+TCKRF GLGLH LVL + S K
Sbjct: 44   ESAGKSDFFEALPDDLVICILSKLSSSAGCPSDFINVLLTCKRFNGLGLHSLVLSRASSK 103

Query: 1090 AFTAKAKNWSESAHKFLKQCMDAGNIEASYTLGMIRFYSLENRGSGASLMAKAAISSHAR 911
            +   +AKNWSESA +FLK C DAGN+EA YTLGMIRFY L+NR SGASLMAKAAISSHA 
Sbjct: 104  SLAVRAKNWSESALRFLKLCADAGNVEACYTLGMIRFYCLQNRVSGASLMAKAAISSHAP 163

Query: 910  ALYSLAVIQFNGSGGTKNDKDLRAGVALCARAAFLGHIDALRELGHCLQDGYGVRQNVAE 731
            ALYSLAVIQFNGS G+KNDKDLRAGVALCARAAFLGHIDALRELGHCLQDGYGVRQNVAE
Sbjct: 164  ALYSLAVIQFNGSVGSKNDKDLRAGVALCARAAFLGHIDALRELGHCLQDGYGVRQNVAE 223

Query: 730  GRRYLVQANARELNSVLGKTSPSSNLGPWSTWHP--NHRNIPGSGCPLLSDYGCNVPAPE 557
            GRR+LVQANAREL +VL   S + +   W TW+P  +HR++ GSGCPLLSD+GCNVPAPE
Sbjct: 224  GRRFLVQANARELAAVLSSASSAVSSRSWLTWNPHQHHRHVTGSGCPLLSDFGCNVPAPE 283

Query: 556  PHPASQFLGDWFELKGGVPGEGLRLCSHDGCGRPETRRHEFRRCSVCGEVNYCSRACQAL 377
             HPAS+FL +WF  +GGVPG GLRLCSH GCGRPE RRHEFRRCSVCG VNYCSRACQAL
Sbjct: 284  AHPASRFLAEWFAARGGVPGPGLRLCSHAGCGRPEMRRHEFRRCSVCGIVNYCSRACQAL 343

Query: 376  DWKMRHKFNCTPVNQ 332
            DWK+RHK  C PV +
Sbjct: 344  DWKLRHKAACAPVER 358


>ref|XP_004135325.1| PREDICTED: F-box protein At1g67340-like [Cucumis sativus]
            gi|449494931|ref|XP_004159686.1| PREDICTED: F-box protein
            At1g67340-like [Cucumis sativus]
          Length = 382

 Score =  491 bits (1264), Expect = e-136
 Identities = 231/312 (74%), Positives = 261/312 (83%), Gaps = 5/312 (1%)
 Frame = -2

Query: 1252 DFFDGIPDDLVVSIFCKLSATADCPSDFFNALITCKRFYGLGLHPLVLMKTSPKAFTAKA 1073
            D FD +PDDLV++I   LS+ A  PSDF N L+TCKR   LGL+P+VL + S K F  +A
Sbjct: 51   DLFDSLPDDLVITILSNLSSAASSPSDFINILLTCKRLNNLGLNPMVLSRASQKTFAIRA 110

Query: 1072 KNWSESAHKFLKQCMDAGNIEASYTLGMIRFYSLENRGSGASLMAKAAISSHARALYSLA 893
            KNW+ESAH+FLKQC DAGN+EA YTLGMIRFY L+NRGSGASLMAKAAI SHA ALYSLA
Sbjct: 111  KNWTESAHRFLKQCSDAGNVEACYTLGMIRFYCLQNRGSGASLMAKAAICSHAPALYSLA 170

Query: 892  VIQFNGSGGTKNDKDLRAGVALCARAAFLGHIDALRELGHCLQDGYGVRQNVAEGRRYLV 713
            VIQFNGSGG+KNDKDLRAGVALCARAAFLGHIDALRELGHCLQDGYGVRQN+ EGRR+LV
Sbjct: 171  VIQFNGSGGSKNDKDLRAGVALCARAAFLGHIDALRELGHCLQDGYGVRQNITEGRRFLV 230

Query: 712  QANARELNSVLGKTSPSS-----NLGPWSTWHPNHRNIPGSGCPLLSDYGCNVPAPEPHP 548
            QANAREL +VL   + SS     +   W+T  P+HR++ GSGCPLLSD+GCN+PAPE HP
Sbjct: 231  QANARELAAVLSSEAASSVAASRSCLTWNTQPPHHRHVTGSGCPLLSDFGCNIPAPEAHP 290

Query: 547  ASQFLGDWFELKGGVPGEGLRLCSHDGCGRPETRRHEFRRCSVCGEVNYCSRACQALDWK 368
            ASQFL +WFE +GG PG GLRLCSH GCGRPETRRHEFRRCSVCG VNYCSRACQALDWK
Sbjct: 291  ASQFLAEWFEARGGSPGNGLRLCSHVGCGRPETRRHEFRRCSVCGAVNYCSRACQALDWK 350

Query: 367  MRHKFNCTPVNQ 332
            +RHK +C PV +
Sbjct: 351  LRHKIDCAPVER 362


>ref|XP_002304680.1| predicted protein [Populus trichocarpa] gi|222842112|gb|EEE79659.1|
            predicted protein [Populus trichocarpa]
          Length = 403

 Score =  491 bits (1263), Expect = e-136
 Identities = 235/320 (73%), Positives = 263/320 (82%), Gaps = 7/320 (2%)
 Frame = -2

Query: 1270 QEVNKLDFFDGIPDDLVVSIFCKLSATADCPSDFFNALITCKRFYGLGLHPLVLMKTSPK 1091
            Q+  + D FD +PDDLV+SI CKLS++A CPSDF N L+TCKR  GLGLH LVL K SPK
Sbjct: 56   QKTGETDLFDSLPDDLVISILCKLSSSASCPSDFINVLLTCKRLNGLGLHSLVLSKASPK 115

Query: 1090 AFTAKAKNWSESAHKFLKQCMDAGNIEASYTLGMIRFYSLENRGSGASLMAKAAISSHAR 911
             F  KAKNWS+SAH+FLK   DAGN+EA YTLGMIRFY L+NRGSGASLMAKAAISS+A 
Sbjct: 116  TFAVKAKNWSDSAHRFLKLFADAGNVEACYTLGMIRFYCLQNRGSGASLMAKAAISSYAP 175

Query: 910  ALYSLAVIQFNGSGGTKNDKDLRAGVALCARAAFLGHIDALRELGHCLQDGYGVRQNVAE 731
            ALYSLAVIQFNGSGG+K+DKDLRAGVALCARAAFLGHIDALRELGHCLQDGYGVRQNV E
Sbjct: 176  ALYSLAVIQFNGSGGSKSDKDLRAGVALCARAAFLGHIDALRELGHCLQDGYGVRQNVTE 235

Query: 730  GRRYLVQANARELNSVLGKTSPSSNLGPWSTW----HPNHRNIPG---SGCPLLSDYGCN 572
            GRR+LVQANAREL +VL K +       W +W    HPNHR+  G   SGCPLLSD+GCN
Sbjct: 236  GRRFLVQANARELAAVLSKHNSGFPTRTWFSWNPHAHPNHRHPTGNGPSGCPLLSDFGCN 295

Query: 571  VPAPEPHPASQFLGDWFELKGGVPGEGLRLCSHDGCGRPETRRHEFRRCSVCGEVNYCSR 392
            VPAPE HPAS+F+ +WF ++GG  G GLRLCSH GCGR ETR+HEFRRCSVCG VNYCSR
Sbjct: 296  VPAPESHPASRFMTEWFAIRGGSSGSGLRLCSHTGCGRSETRKHEFRRCSVCGAVNYCSR 355

Query: 391  ACQALDWKMRHKFNCTPVNQ 332
            ACQALDWK+RHK  C PV +
Sbjct: 356  ACQALDWKLRHKEGCAPVER 375


>ref|XP_002297844.1| predicted protein [Populus trichocarpa] gi|222845102|gb|EEE82649.1|
            predicted protein [Populus trichocarpa]
          Length = 403

 Score =  489 bits (1260), Expect = e-136
 Identities = 236/315 (74%), Positives = 259/315 (82%), Gaps = 8/315 (2%)
 Frame = -2

Query: 1252 DFFDGIPDDLVVSIFCKLSATADCPSDFFNALITCKRFYGLGLHPLVLMKTSPKAFTAKA 1073
            D F+ +PDDLV+SI CKLS++A CPSDF N LITC+R  GLGLH LVL K SPK+F  KA
Sbjct: 63   DLFESLPDDLVISILCKLSSSASCPSDFINVLITCRRLNGLGLHSLVLSKASPKSFAIKA 122

Query: 1072 KNWSESAHKFLKQCMDAGNIEASYTLGMIRFYSLENRGSGASLMAKAAISSHARALYSLA 893
             NWS+SAH+FLK C DAGN EA YTLGMIRFY L+NRGSGASLMAKAAISSHA ALYSLA
Sbjct: 123  NNWSDSAHRFLKLCADAGNAEACYTLGMIRFYCLQNRGSGASLMAKAAISSHAPALYSLA 182

Query: 892  VIQFNGSGGTKNDKDLRAGVALCARAAFLGHIDALRELGHCLQDGYGVRQNVAEGRRYLV 713
            VIQFNGSGG+K+DKDLRAGVALCARAAFLGHIDALRELGHCLQDGYGVRQNV EGRR+LV
Sbjct: 183  VIQFNGSGGSKSDKDLRAGVALCARAAFLGHIDALRELGHCLQDGYGVRQNVTEGRRFLV 242

Query: 712  QANARELNSVLGKTSPSSNLGPWSTW----HPNHR----NIPGSGCPLLSDYGCNVPAPE 557
            QANAREL +VL           W TW    HPNHR    N P SGCPLLSD+GCNVPAPE
Sbjct: 243  QANARELAAVLSNPDSGLPTRAWLTWNPHAHPNHRHPSENGP-SGCPLLSDFGCNVPAPE 301

Query: 556  PHPASQFLGDWFELKGGVPGEGLRLCSHDGCGRPETRRHEFRRCSVCGEVNYCSRACQAL 377
             HPAS+F+ +WF ++GG  G GLRLCSH GCGRPETR+HEFRRCSVCG VNYCSRACQAL
Sbjct: 302  AHPASRFMTEWFAIRGGSAGSGLRLCSHTGCGRPETRKHEFRRCSVCGAVNYCSRACQAL 361

Query: 376  DWKMRHKFNCTPVNQ 332
            DWK+RHK  C PV +
Sbjct: 362  DWKLRHKEECAPVER 376