BLASTX nr result

ID: Coptis23_contig00004238 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00004238
         (235 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|NP_001043738.1| Os01g0652600 [Oryza sativa Japonica Group] g...    96   3e-18
gb|EAY75202.1| hypothetical protein OsI_03093 [Oryza sativa Indi...    96   3e-18
gb|EAZ12924.1| hypothetical protein OsJ_02845 [Oryza sativa Japo...    96   3e-18
ref|XP_002329780.1| predicted protein [Populus trichocarpa] gi|2...    95   7e-18
ref|XP_002305797.1| predicted protein [Populus trichocarpa] gi|2...    94   9e-18

>ref|NP_001043738.1| Os01g0652600 [Oryza sativa Japonica Group]
           gi|55297085|dbj|BAD68706.1| putative ketol-acid
           reductoisomerase precursor [Oryza sativa Japonica Group]
           gi|113533269|dbj|BAF05652.1| Os01g0652600 [Oryza sativa
           Japonica Group]
          Length = 548

 Score = 95.9 bits (237), Expect = 3e-18
 Identities = 46/52 (88%), Positives = 47/52 (90%)
 Frame = +3

Query: 3   VAVDKNDPINQDLISNFFSDPVHGAIEVCAQLRPTVDISVPQDADFVRAELR 158
           V VDKN P+NQDLISNFFSDPVH AIEVCAQLRPTVDISVP DADFVR ELR
Sbjct: 494 VTVDKNAPVNQDLISNFFSDPVHSAIEVCAQLRPTVDISVPADADFVRPELR 545


>gb|EAY75202.1| hypothetical protein OsI_03093 [Oryza sativa Indica Group]
          Length = 703

 Score = 95.9 bits (237), Expect = 3e-18
 Identities = 46/52 (88%), Positives = 47/52 (90%)
 Frame = +3

Query: 3   VAVDKNDPINQDLISNFFSDPVHGAIEVCAQLRPTVDISVPQDADFVRAELR 158
           V VDKN P+NQDLISNFFSDPVH AIEVCAQLRPTVDISVP DADFVR ELR
Sbjct: 649 VTVDKNAPVNQDLISNFFSDPVHSAIEVCAQLRPTVDISVPADADFVRPELR 700


>gb|EAZ12924.1| hypothetical protein OsJ_02845 [Oryza sativa Japonica Group]
          Length = 581

 Score = 95.9 bits (237), Expect = 3e-18
 Identities = 46/52 (88%), Positives = 47/52 (90%)
 Frame = +3

Query: 3   VAVDKNDPINQDLISNFFSDPVHGAIEVCAQLRPTVDISVPQDADFVRAELR 158
           V VDKN P+NQDLISNFFSDPVH AIEVCAQLRPTVDISVP DADFVR ELR
Sbjct: 527 VTVDKNAPVNQDLISNFFSDPVHSAIEVCAQLRPTVDISVPADADFVRPELR 578


>ref|XP_002329780.1| predicted protein [Populus trichocarpa] gi|222870842|gb|EEF07973.1|
           predicted protein [Populus trichocarpa]
          Length = 525

 Score = 94.7 bits (234), Expect = 7e-18
 Identities = 45/52 (86%), Positives = 48/52 (92%)
 Frame = +3

Query: 3   VAVDKNDPINQDLISNFFSDPVHGAIEVCAQLRPTVDISVPQDADFVRAELR 158
           VAVD + PIN+DLISNFFSDPVHGA+EVCAQLRPTVDISVP DADFVR ELR
Sbjct: 470 VAVDNSTPINRDLISNFFSDPVHGAVEVCAQLRPTVDISVPADADFVRPELR 521


>ref|XP_002305797.1| predicted protein [Populus trichocarpa] gi|222848761|gb|EEE86308.1|
           predicted protein [Populus trichocarpa]
          Length = 589

 Score = 94.4 bits (233), Expect = 9e-18
 Identities = 45/52 (86%), Positives = 47/52 (90%)
 Frame = +3

Query: 3   VAVDKNDPINQDLISNFFSDPVHGAIEVCAQLRPTVDISVPQDADFVRAELR 158
           VAVD   PIN+DLISNFFSDPVHGA+EVCAQLRPTVDISVP DADFVR ELR
Sbjct: 534 VAVDNGTPINRDLISNFFSDPVHGAVEVCAQLRPTVDISVPPDADFVRPELR 585


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