BLASTX nr result

ID: Coptis23_contig00004227 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00004227
         (980 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|NP_001065103.1| Os10g0523700 [Oryza sativa Japonica Group] g...   341   1e-91
gb|EAY79257.1| hypothetical protein OsI_34374 [Oryza sativa Indi...   341   1e-91
ref|XP_003574224.1| PREDICTED: arogenate dehydratase 3, chloropl...   337   3e-90
dbj|BAK00872.1| predicted protein [Hordeum vulgare subsp. vulgare]    335   8e-90
dbj|BAK05484.1| predicted protein [Hordeum vulgare subsp. vulgar...   335   8e-90

>ref|NP_001065103.1| Os10g0523700 [Oryza sativa Japonica Group]
           gi|27311276|gb|AAO00702.1| putative chorismate
           mutase/prephenate dehydratase [Oryza sativa Japonica
           Group] gi|31433143|gb|AAP54696.1| prephenate dehydratase
           family protein, expressed [Oryza sativa Japonica Group]
           gi|113639712|dbj|BAF27017.1| Os10g0523700 [Oryza sativa
           Japonica Group] gi|215704695|dbj|BAG94323.1| unnamed
           protein product [Oryza sativa Japonica Group]
          Length = 408

 Score =  341 bits (875), Expect = 1e-91
 Identities = 179/287 (62%), Positives = 217/287 (75%), Gaps = 13/287 (4%)
 Frame = -1

Query: 980 KTACPDCTPLPCRAFLDAITAVEEGKADLAVLPVESTMEGTALRNYDLLLRHDLPIVQEV 801
           KTA P C  +PCRAF DA+ AV+ G  D A+LPVESTMEGTALRNYDLLLRHDL +VQE+
Sbjct: 119 KTALPGCDTVPCRAFADALAAVDGGAVDRAILPVESTMEGTALRNYDLLLRHDLVVVQEI 178

Query: 800 SMYVHYCLLAMPGVQKGELKKVISHPLALAHCGRALAQLGVDHEAVEDTAGAVELLLSNR 621
           +++VHYCLLAMPGV+  E+++VISHP+ALAHCGRALA+LGVD E VEDTAGAVE+L SNR
Sbjct: 179 NLFVHYCLLAMPGVRAAEVRRVISHPMALAHCGRALARLGVDREPVEDTAGAVEMLRSNR 238

Query: 620 MLDTAAIASSQAALLYGLDVLAQDVQDESWNVTRFLILSKDKS-IPKKNKFGSKTSLVVA 444
           MLDTAAIAS +AA LYGLDVLA  +QDESWNVTRFL+LSK  S +       +KTS+VVA
Sbjct: 239 MLDTAAIASPRAADLYGLDVLAHGLQDESWNVTRFLLLSKPPSPVTLPMDADAKTSMVVA 298

Query: 443 HHTGTLTVLLKLLSAFSARNINLTKLEVNPSRTDG----------PVLVLDPKEGG--PL 300
           H  G++ V+LK+LSAFS+RNINLTKLEV  +   G          PV++LD    G   L
Sbjct: 299 HRGGSMMVVLKVLSAFSSRNINLTKLEVINNNDGGGGGGGAAAGHPVMILDTSARGAPTL 358

Query: 299 KEFPCVLYVDFEGSMDDQKIKDALAEISEFPVFIRTLGSYSCDPNIY 159
           + FP VLYVD EG+  D ++ DA+ EI  F VF+R LG Y+ D N+Y
Sbjct: 359 RAFPHVLYVDCEGASHDPRVLDAIKEIERFAVFVRVLGCYAADSNVY 405


>gb|EAY79257.1| hypothetical protein OsI_34374 [Oryza sativa Indica Group]
          Length = 408

 Score =  341 bits (875), Expect = 1e-91
 Identities = 179/287 (62%), Positives = 217/287 (75%), Gaps = 13/287 (4%)
 Frame = -1

Query: 980 KTACPDCTPLPCRAFLDAITAVEEGKADLAVLPVESTMEGTALRNYDLLLRHDLPIVQEV 801
           KTA P C  +PCRAF DA+ AV+ G  D A+LPVESTMEGTALRNYDLLLRHDL +VQE+
Sbjct: 119 KTALPGCDTVPCRAFADALAAVDGGAVDRAILPVESTMEGTALRNYDLLLRHDLVVVQEI 178

Query: 800 SMYVHYCLLAMPGVQKGELKKVISHPLALAHCGRALAQLGVDHEAVEDTAGAVELLLSNR 621
           +++VHYCLLAMPGV+  E+++VISHP+ALAHCGRALA+LGVD E VEDTAGAVE+L SNR
Sbjct: 179 NLFVHYCLLAMPGVRAAEVRRVISHPMALAHCGRALARLGVDREPVEDTAGAVEMLRSNR 238

Query: 620 MLDTAAIASSQAALLYGLDVLAQDVQDESWNVTRFLILSKDKS-IPKKNKFGSKTSLVVA 444
           MLDTAAIAS +AA LYGLDVLA  +QDESWNVTRFL+LSK  S +       +KTS+VVA
Sbjct: 239 MLDTAAIASPRAADLYGLDVLAHGLQDESWNVTRFLLLSKPPSPVTLPMDADAKTSMVVA 298

Query: 443 HHTGTLTVLLKLLSAFSARNINLTKLEVNPSRTDG----------PVLVLDPKEGG--PL 300
           H  G++ V+LK+LSAFS+RNINLTKLEV  +   G          PV++LD    G   L
Sbjct: 299 HRGGSMMVVLKVLSAFSSRNINLTKLEVINNNDGGGGGGGAAAGHPVMILDTSARGAPTL 358

Query: 299 KEFPCVLYVDFEGSMDDQKIKDALAEISEFPVFIRTLGSYSCDPNIY 159
           + FP VLYVD EG+  D ++ DA+ EI  F VF+R LG Y+ D N+Y
Sbjct: 359 RAFPHVLYVDCEGASHDPRVLDAIKEIERFAVFVRVLGCYAADSNVY 405


>ref|XP_003574224.1| PREDICTED: arogenate dehydratase 3, chloroplastic-like
           [Brachypodium distachyon]
          Length = 400

 Score =  337 bits (863), Expect = 3e-90
 Identities = 176/285 (61%), Positives = 219/285 (76%), Gaps = 11/285 (3%)
 Frame = -1

Query: 980 KTACPDCTPLPCRAFLDAITAVEEGKADLAVLPVESTMEGTALRNYDLLLRHDLPIVQEV 801
           KTA P C  +PCRAF DA++AV+ G  D A+LPVESTMEGTALRNYDLLLRH+L +VQE+
Sbjct: 113 KTALPGCDTVPCRAFADALSAVDRGLVDRAILPVESTMEGTALRNYDLLLRHELVVVQEI 172

Query: 800 SMYVHYCLLAMPGVQKGELKKVISHPLALAHCGRALAQLGVDHEAVEDTAGAVELLLSNR 621
           +++VHYCLLAMPGV+  ++++VISHP+ALAHCGRALA+LGVD E VEDTAGAVE+L SN 
Sbjct: 173 NLFVHYCLLAMPGVRAAQVRRVISHPMALAHCGRALARLGVDREPVEDTAGAVEMLRSNM 232

Query: 620 MLDTAAIASSQAALLYGLDVLAQDVQDESWNVTRFLILSKDKS-IPKKNKFGSKTSLVVA 444
           MLDTAAIAS +AA LYGLDVLA  +QDESWNVTRFL+LSK  S +       +KTS+VVA
Sbjct: 233 MLDTAAIASPRAADLYGLDVLAHGLQDESWNVTRFLLLSKPPSPVAVPVDADAKTSMVVA 292

Query: 443 HHTGTLTVLLKLLSAFSARNINLTKLEVNPSRTDG--------PVLVLDP-KEGGP-LKE 294
           H  G++ V+LK+LSAFS+RNIN++KLEV  +   G        PV++LD    G P L+ 
Sbjct: 293 HRGGSMAVVLKVLSAFSSRNINMSKLEVINNEGGGVGVGEPRPPVMILDTGARGAPTLRS 352

Query: 293 FPCVLYVDFEGSMDDQKIKDALAEISEFPVFIRTLGSYSCDPNIY 159
           FP VLYVD EG+ DD  + DA+ EI +F VF+R LG Y+ D N+Y
Sbjct: 353 FPHVLYVDCEGAADDPLVLDAIKEIEKFAVFVRVLGCYAADTNVY 397


>dbj|BAK00872.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 375

 Score =  335 bits (860), Expect = 8e-90
 Identities = 175/282 (62%), Positives = 216/282 (76%), Gaps = 8/282 (2%)
 Frame = -1

Query: 980 KTACPDCTPLPCRAFLDAITAVEEGKADLAVLPVESTMEGTALRNYDLLLRHDLPIVQEV 801
           KTA P C  +PCRAF DA+ AV+ G    A+LPVESTMEGTALRNYDLLLRHDL + QE+
Sbjct: 91  KTALPGCETVPCRAFADALAAVDRGLVHRAILPVESTMEGTALRNYDLLLRHDLVVAQEI 150

Query: 800 SMYVHYCLLAMPGVQKGELKKVISHPLALAHCGRALAQLGVDHEAVEDTAGAVELLLSNR 621
           +++VHYCLLAMPGV+  E+++VISHP+ALAHCGRALA+LGVD E VEDTAGAVE+L SN 
Sbjct: 151 NLFVHYCLLAMPGVRATEVRRVISHPMALAHCGRALARLGVDREPVEDTAGAVEMLRSNM 210

Query: 620 MLDTAAIASSQAALLYGLDVLAQDVQDESWNVTRFLILSKDKS-IPKKNKFGSKTSLVVA 444
           MLDTAAIAS +AA LYGLDVLA  +QDESWNVTRFL+LSK  S +P      +KTS+VVA
Sbjct: 211 MLDTAAIASPRAADLYGLDVLAHGLQDESWNVTRFLLLSKPPSPVPVPVDADAKTSMVVA 270

Query: 443 HHTGTLTVLLKLLSAFSARNINLTKLEV-----NPSRTDGPVLVLDP-KEGGP-LKEFPC 285
           H  G++ V+LK+LSAFS+RNIN++KLEV            PV++LD    G P L+ FP 
Sbjct: 271 HRGGSMAVVLKVLSAFSSRNINMSKLEVINNEGGVGEPRPPVMILDTGARGAPTLRAFPH 330

Query: 284 VLYVDFEGSMDDQKIKDALAEISEFPVFIRTLGSYSCDPNIY 159
           VLYVD EG+ DD  +++A+ EI +F VF+R LG Y+ D N+Y
Sbjct: 331 VLYVDCEGAADDPLVREAIKEIEKFAVFVRVLGCYAADTNVY 372


>dbj|BAK05484.1| predicted protein [Hordeum vulgare subsp. vulgare]
           gi|326493462|dbj|BAJ85192.1| predicted protein [Hordeum
           vulgare subsp. vulgare] gi|326493854|dbj|BAJ85389.1|
           predicted protein [Hordeum vulgare subsp. vulgare]
           gi|326496571|dbj|BAJ94747.1| predicted protein [Hordeum
           vulgare subsp. vulgare] gi|326508782|dbj|BAJ95913.1|
           predicted protein [Hordeum vulgare subsp. vulgare]
           gi|326509417|dbj|BAJ91625.1| predicted protein [Hordeum
           vulgare subsp. vulgare] gi|326531484|dbj|BAJ97746.1|
           predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 401

 Score =  335 bits (860), Expect = 8e-90
 Identities = 175/282 (62%), Positives = 216/282 (76%), Gaps = 8/282 (2%)
 Frame = -1

Query: 980 KTACPDCTPLPCRAFLDAITAVEEGKADLAVLPVESTMEGTALRNYDLLLRHDLPIVQEV 801
           KTA P C  +PCRAF DA+ AV+ G    A+LPVESTMEGTALRNYDLLLRHDL + QE+
Sbjct: 117 KTALPGCETVPCRAFADALAAVDRGLVHRAILPVESTMEGTALRNYDLLLRHDLVVAQEI 176

Query: 800 SMYVHYCLLAMPGVQKGELKKVISHPLALAHCGRALAQLGVDHEAVEDTAGAVELLLSNR 621
           +++VHYCLLAMPGV+  E+++VISHP+ALAHCGRALA+LGVD E VEDTAGAVE+L SN 
Sbjct: 177 NLFVHYCLLAMPGVRATEVRRVISHPMALAHCGRALARLGVDREPVEDTAGAVEMLRSNM 236

Query: 620 MLDTAAIASSQAALLYGLDVLAQDVQDESWNVTRFLILSKDKS-IPKKNKFGSKTSLVVA 444
           MLDTAAIAS +AA LYGLDVLA  +QDESWNVTRFL+LSK  S +P      +KTS+VVA
Sbjct: 237 MLDTAAIASPRAADLYGLDVLAHGLQDESWNVTRFLLLSKPPSPVPVPVDADAKTSMVVA 296

Query: 443 HHTGTLTVLLKLLSAFSARNINLTKLEV-----NPSRTDGPVLVLDP-KEGGP-LKEFPC 285
           H  G++ V+LK+LSAFS+RNIN++KLEV            PV++LD    G P L+ FP 
Sbjct: 297 HRGGSMAVVLKVLSAFSSRNINMSKLEVINNEGGVGEPRPPVMILDTGARGAPTLRAFPH 356

Query: 284 VLYVDFEGSMDDQKIKDALAEISEFPVFIRTLGSYSCDPNIY 159
           VLYVD EG+ DD  +++A+ EI +F VF+R LG Y+ D N+Y
Sbjct: 357 VLYVDCEGAADDPLVREAIKEIEKFAVFVRVLGCYAADTNVY 398


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