BLASTX nr result

ID: Coptis23_contig00004221 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00004221
         (521 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002282455.1| PREDICTED: putative cyclic nucleotide-gated ...   250   1e-64
emb|CAN61379.1| hypothetical protein VITISV_037545 [Vitis vinifera]   250   1e-64
ref|XP_002529932.1| Cyclic nucleotide-gated ion channel, putativ...   249   2e-64
ref|XP_002314283.1| predicted protein [Populus trichocarpa] gi|2...   240   1e-61
ref|XP_002276332.1| PREDICTED: putative cyclic nucleotide-gated ...   233   2e-59

>ref|XP_002282455.1| PREDICTED: putative cyclic nucleotide-gated ion channel 15-like
            [Vitis vinifera]
          Length = 713

 Score =  250 bits (638), Expect = 1e-64
 Identities = 123/177 (69%), Positives = 145/177 (81%), Gaps = 5/177 (2%)
 Frame = -2

Query: 520  FIIRGHLNSHTTNGGRTGFFNLSLIGPGDFCGEELLTWALDPRPNAVLPSSTRTVGAIGE 341
            F+IRG+L+S+TTNGGRTGFFN   IGPGDFCGEELLTWAL+PRP+ +LPSSTRTV +I E
Sbjct: 522  FVIRGNLDSYTTNGGRTGFFNSCRIGPGDFCGEELLTWALEPRPSIILPSSTRTVKSISE 581

Query: 340  VEAFALIAEDMKFVASQFRRLHSKQLRHKFRFYSHQWRSWAACFLQAAWRRYKRMKDAAL 161
            VEAFALIAED+KFVASQFRRLHSKQLRHKFRFYS  WR+WAACF+QAAWRR+KR K+AA 
Sbjct: 582  VEAFALIAEDLKFVASQFRRLHSKQLRHKFRFYSPHWRTWAACFIQAAWRRFKRRKEAAE 641

Query: 160  LKIKENPISNSVEPT-----SIGPPQGTGIAVYATRLAASTRMGLCKSYGSKVSVVS 5
            LK +E+P++   +P+      + P  G+G+AVYA RLAAS R G  K  GS  SVVS
Sbjct: 642  LKAREHPVAAEPQPSFDRFDVVMPAPGSGLAVYAARLAASARRGPLKHSGSDSSVVS 698


>emb|CAN61379.1| hypothetical protein VITISV_037545 [Vitis vinifera]
          Length = 650

 Score =  250 bits (638), Expect = 1e-64
 Identities = 123/177 (69%), Positives = 145/177 (81%), Gaps = 5/177 (2%)
 Frame = -2

Query: 520 FIIRGHLNSHTTNGGRTGFFNLSLIGPGDFCGEELLTWALDPRPNAVLPSSTRTVGAIGE 341
           F+IRG+L+S+TTNGGRTGFFN   IGPGDFCGEELLTWAL+PRP+ +LPSSTRTV +I E
Sbjct: 459 FVIRGNLDSYTTNGGRTGFFNSCRIGPGDFCGEELLTWALEPRPSIILPSSTRTVKSISE 518

Query: 340 VEAFALIAEDMKFVASQFRRLHSKQLRHKFRFYSHQWRSWAACFLQAAWRRYKRMKDAAL 161
           VEAFALIAED+KFVASQFRRLHSKQLRHKFRFYS  WR+WAACF+QAAWRR+KR K+AA 
Sbjct: 519 VEAFALIAEDLKFVASQFRRLHSKQLRHKFRFYSPHWRTWAACFIQAAWRRFKRRKEAAE 578

Query: 160 LKIKENPISNSVEPT-----SIGPPQGTGIAVYATRLAASTRMGLCKSYGSKVSVVS 5
           LK +E+P++   +P+      + P  G+G+AVYA RLAAS R G  K  GS  SVVS
Sbjct: 579 LKAREHPVAAEPQPSFDRFDVVMPAPGSGLAVYAARLAASARRGPLKHSGSDSSVVS 635


>ref|XP_002529932.1| Cyclic nucleotide-gated ion channel, putative [Ricinus communis]
           gi|223530562|gb|EEF32440.1| Cyclic nucleotide-gated ion
           channel, putative [Ricinus communis]
          Length = 518

 Score =  249 bits (635), Expect = 2e-64
 Identities = 124/171 (72%), Positives = 139/171 (81%)
 Frame = -2

Query: 520 FIIRGHLNSHTTNGGRTGFFNLSLIGPGDFCGEELLTWALDPRPNAVLPSSTRTVGAIGE 341
           FIIRG+L+S+TTNGGRTGFFN   IGPGDFCGEELLTWALDPRP+ +LPSSTRTV AI E
Sbjct: 336 FIIRGNLDSYTTNGGRTGFFNSCRIGPGDFCGEELLTWALDPRPSVILPSSTRTVKAISE 395

Query: 340 VEAFALIAEDMKFVASQFRRLHSKQLRHKFRFYSHQWRSWAACFLQAAWRRYKRMKDAAL 161
           VEAFAL AED+KFVASQFRRLHSKQLR KFRFYSHQWR+WAACF+QAAWRRYK+ K+AA 
Sbjct: 396 VEAFALEAEDLKFVASQFRRLHSKQLRQKFRFYSHQWRTWAACFIQAAWRRYKKRKEAAE 455

Query: 160 LKIKENPISNSVEPTSIGPPQGTGIAVYATRLAASTRMGLCKSYGSKVSVV 8
           L+ KENP     EP    P   +G+A+ A RLAASTR G+ K   S  SVV
Sbjct: 456 LRAKENPAEAEPEP----PSASSGLAMCAARLAASTRRGIMKHSASDSSVV 502


>ref|XP_002314283.1| predicted protein [Populus trichocarpa] gi|222850691|gb|EEE88238.1|
            predicted protein [Populus trichocarpa]
          Length = 745

 Score =  240 bits (612), Expect = 1e-61
 Identities = 119/172 (69%), Positives = 139/172 (80%)
 Frame = -2

Query: 520  FIIRGHLNSHTTNGGRTGFFNLSLIGPGDFCGEELLTWALDPRPNAVLPSSTRTVGAIGE 341
            FIIRG+L+S+TTNGGRTGFFN   +GPGDFCGEELLTWALDPRP+ +LPSSTRTV AI E
Sbjct: 563  FIIRGNLDSYTTNGGRTGFFNSCRLGPGDFCGEELLTWALDPRPSIILPSSTRTVKAILE 622

Query: 340  VEAFALIAEDMKFVASQFRRLHSKQLRHKFRFYSHQWRSWAACFLQAAWRRYKRMKDAAL 161
            VEAFAL AED+KFVASQFRRLHSKQLR KFRFYSH WR+WAACF+QAAWRRYK+ K+A  
Sbjct: 623  VEAFALSAEDLKFVASQFRRLHSKQLRQKFRFYSHHWRTWAACFIQAAWRRYKKRKEATD 682

Query: 160  LKIKENPISNSVEPTSIGPPQGTGIAVYATRLAASTRMGLCKSYGSKVSVVS 5
            L+ +ENP   + +P    P  G+ +++YA RL AS R G+ K  GS  SVVS
Sbjct: 683  LRARENP--TAADPALTSP--GSSLSMYAARLKASARRGVLKRSGSDSSVVS 730


>ref|XP_002276332.1| PREDICTED: putative cyclic nucleotide-gated ion channel 15-like
           [Vitis vinifera]
          Length = 696

 Score =  233 bits (593), Expect = 2e-59
 Identities = 114/159 (71%), Positives = 130/159 (81%)
 Frame = -2

Query: 520 FIIRGHLNSHTTNGGRTGFFNLSLIGPGDFCGEELLTWALDPRPNAVLPSSTRTVGAIGE 341
           FI+RGHL+S+TTNGGRTGFFN   IGP DFCGEELLTWALDPRP  +LPSSTRTV A+ E
Sbjct: 519 FIVRGHLDSYTTNGGRTGFFNSGRIGPTDFCGEELLTWALDPRPGVILPSSTRTVMALTE 578

Query: 340 VEAFALIAEDMKFVASQFRRLHSKQLRHKFRFYSHQWRSWAACFLQAAWRRYKRMKDAAL 161
           VEAFALIA+D+KFVASQFRRLHSKQLRH  RFYSHQWR+WAACF+QAAW RYKR ++A+ 
Sbjct: 579 VEAFALIADDLKFVASQFRRLHSKQLRHTLRFYSHQWRTWAACFIQAAWFRYKRRREASE 638

Query: 160 LKIKENPISNSVEPTSIGPPQGTGIAVYATRLAASTRMG 44
           LK KE   S++      G  Q  G+AVYA +LAASTR G
Sbjct: 639 LKAKE---SSAASGPDQGIEQKAGLAVYAVKLAASTRRG 674


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