BLASTX nr result
ID: Coptis23_contig00004213
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Coptis23_contig00004213
(776 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002316547.1| predicted protein [Populus trichocarpa] gi|2... 204 2e-50
ref|NP_001046343.1| Os02g0226000 [Oryza sativa Japonica Group] g... 201 2e-49
ref|NP_001152547.1| peroxisomal membrane protein PMP22 [Zea mays... 201 2e-49
gb|ACG35860.1| peroxisomal membrane protein PMP22 [Zea mays] 201 2e-49
gb|EAY85073.1| hypothetical protein OsI_06429 [Oryza sativa Indi... 199 4e-49
>ref|XP_002316547.1| predicted protein [Populus trichocarpa] gi|222859612|gb|EEE97159.1|
predicted protein [Populus trichocarpa]
Length = 185
Score = 204 bits (519), Expect = 2e-50
Identities = 104/185 (56%), Positives = 125/185 (67%), Gaps = 6/185 (3%)
Frame = -1
Query: 764 MSELAKKGWEQYMLQLQHHPLRTKAITAGVLSGISDSVAQKLSGIXXXXXXXXXXKVXXX 585
M +AKKG +QYMLQLQ HPLRTKAITAGVLS +SD V+QKLSGI KV
Sbjct: 1 MGSVAKKGLQQYMLQLQQHPLRTKAITAGVLSALSDIVSQKLSGIQKLQIKRILLKVLFG 60
Query: 584 XXXXXXXXXXXXXXXXXXXXXXXXXXXL------EQLTSSPLNNLMFLMYYGLVVEGRPW 423
+ EQLT+SP NNL+F++YYG+V++GRPW
Sbjct: 61 FGYLGPFGHYLHILLDKLFKGKKDTTTVAKKVAVEQLTASPWNNLVFMVYYGMVIDGRPW 120
Query: 422 VQVRSKVKKDYPSVQLTSWMFWPIVGWVNHLYMPLQFRVIFHSFVACCWGIFLNLRARSM 243
+QV++K+KK+YP+VQ TSW FWP+VGWVNH Y+P QFRVIFHS +A WGIFLNLRARSM
Sbjct: 121 LQVKTKLKKEYPAVQFTSWTFWPVVGWVNHQYIPQQFRVIFHSLIAVGWGIFLNLRARSM 180
Query: 242 ALTKG 228
ALTKG
Sbjct: 181 ALTKG 185
>ref|NP_001046343.1| Os02g0226000 [Oryza sativa Japonica Group]
gi|49388530|dbj|BAD25652.1| putative peroxisomal
membrane protein 22 kDa [Oryza sativa Japonica Group]
gi|113535874|dbj|BAF08257.1| Os02g0226000 [Oryza sativa
Japonica Group] gi|125581366|gb|EAZ22297.1| hypothetical
protein OsJ_05949 [Oryza sativa Japonica Group]
gi|215768509|dbj|BAH00738.1| unnamed protein product
[Oryza sativa Japonica Group]
Length = 205
Score = 201 bits (510), Expect = 2e-49
Identities = 105/189 (55%), Positives = 124/189 (65%), Gaps = 9/189 (4%)
Frame = -1
Query: 776 RRRGMSE---LAKKGWEQYMLQLQHHPLRTKAITAGVLSGISDSVAQKLSGIXXXXXXXX 606
R RG E LA++ W QY+ QLQ HPLRTK ITAG L+G+SDSVAQKLSG
Sbjct: 14 RGRGEGEEGSLARRAWRQYLRQLQLHPLRTKMITAGCLAGVSDSVAQKLSGYQRIEKRRL 73
Query: 605 XXKVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX------LEQLTSSPLNNLMFLMYYGL 444
K+ LEQ+TSSP NNL+FL YYG
Sbjct: 74 LLKMLFGFAYGGPFGHFLHKVLDYIFKGKKDTKTIAKKVLLEQITSSPWNNLLFLFYYGY 133
Query: 443 VVEGRPWVQVRSKVKKDYPSVQLTSWMFWPIVGWVNHLYMPLQFRVIFHSFVACCWGIFL 264
VVE RP+ +V+++VKK YPSVQL++WMFWPIVGW+NH+YMPLQFRVIFHSFVACCWGIFL
Sbjct: 134 VVERRPFKEVKTRVKKQYPSVQLSAWMFWPIVGWINHMYMPLQFRVIFHSFVACCWGIFL 193
Query: 263 NLRARSMAL 237
NLRAR+M+L
Sbjct: 194 NLRARAMSL 202
>ref|NP_001152547.1| peroxisomal membrane protein PMP22 [Zea mays]
gi|195657389|gb|ACG48162.1| peroxisomal membrane protein
PMP22 [Zea mays]
Length = 203
Score = 201 bits (510), Expect = 2e-49
Identities = 102/184 (55%), Positives = 120/184 (65%), Gaps = 6/184 (3%)
Frame = -1
Query: 770 RGMSELAKKGWEQYMLQLQHHPLRTKAITAGVLSGISDSVAQKLSGIXXXXXXXXXXKVX 591
+G LA++ W QY+LQLQ HPLRTK ITAG L+G+SDSVAQKLSG K+
Sbjct: 17 KGEGSLARRAWSQYLLQLQQHPLRTKMITAGCLAGVSDSVAQKLSGFQKIEKRRLLLKML 76
Query: 590 XXXXXXXXXXXXXXXXXXXXXXXXXXXXX------LEQLTSSPLNNLMFLMYYGLVVEGR 429
LEQ+TSSP NN++FL YYG VVE R
Sbjct: 77 FGFAYGGPFGHFLHKILYYIFQGKKDTKTIAKKVLLEQVTSSPWNNILFLFYYGYVVERR 136
Query: 428 PWVQVRSKVKKDYPSVQLTSWMFWPIVGWVNHLYMPLQFRVIFHSFVACCWGIFLNLRAR 249
P +V ++VKK YPSVQL++WMFWPIVGW+NH YMPLQFRVIFHSFVACCWGIFLNLRAR
Sbjct: 137 PLKEVTTRVKKQYPSVQLSAWMFWPIVGWINHQYMPLQFRVIFHSFVACCWGIFLNLRAR 196
Query: 248 SMAL 237
+M+L
Sbjct: 197 AMSL 200
>gb|ACG35860.1| peroxisomal membrane protein PMP22 [Zea mays]
Length = 203
Score = 201 bits (510), Expect = 2e-49
Identities = 102/184 (55%), Positives = 120/184 (65%), Gaps = 6/184 (3%)
Frame = -1
Query: 770 RGMSELAKKGWEQYMLQLQHHPLRTKAITAGVLSGISDSVAQKLSGIXXXXXXXXXXKVX 591
+G LA++ W QY+LQLQ HPLRTK ITAG L+G+SDSVAQKLSG K+
Sbjct: 17 KGEGSLARRAWRQYLLQLQQHPLRTKMITAGCLAGVSDSVAQKLSGFQKIEKRRLLLKML 76
Query: 590 XXXXXXXXXXXXXXXXXXXXXXXXXXXXX------LEQLTSSPLNNLMFLMYYGLVVEGR 429
LEQ+TSSP NN++FL YYG VVE R
Sbjct: 77 FGFAYGGPFGHFLHKILDYIFQGKKDTKTIAKKVLLEQVTSSPWNNILFLFYYGYVVERR 136
Query: 428 PWVQVRSKVKKDYPSVQLTSWMFWPIVGWVNHLYMPLQFRVIFHSFVACCWGIFLNLRAR 249
P +V ++VKK YPSVQL++WMFWPIVGW+NH YMPLQFRVIFHSFVACCWGIFLNLRAR
Sbjct: 137 PLKEVTTRVKKQYPSVQLSAWMFWPIVGWINHQYMPLQFRVIFHSFVACCWGIFLNLRAR 196
Query: 248 SMAL 237
+M+L
Sbjct: 197 AMSL 200
>gb|EAY85073.1| hypothetical protein OsI_06429 [Oryza sativa Indica Group]
Length = 206
Score = 199 bits (507), Expect = 4e-49
Identities = 101/179 (56%), Positives = 120/179 (67%), Gaps = 6/179 (3%)
Frame = -1
Query: 755 LAKKGWEQYMLQLQHHPLRTKAITAGVLSGISDSVAQKLSGIXXXXXXXXXXKVXXXXXX 576
LA++ W QY+ QLQ HPLRTK ITAG L+G+SDSVAQKLSG K+
Sbjct: 25 LARRAWRQYLRQLQLHPLRTKMITAGCLAGVSDSVAQKLSGYQRIEKRRLLLKMLFGFAY 84
Query: 575 XXXXXXXXXXXXXXXXXXXXXXXX------LEQLTSSPLNNLMFLMYYGLVVEGRPWVQV 414
LEQ+TSSP NNL+FL YYG VVE RP+ +V
Sbjct: 85 GGPFGHFLHKVLDYIFKGKKDTKTIAKKVLLEQITSSPWNNLLFLFYYGYVVERRPFKEV 144
Query: 413 RSKVKKDYPSVQLTSWMFWPIVGWVNHLYMPLQFRVIFHSFVACCWGIFLNLRARSMAL 237
+++VKK YPSVQL++WMFWPIVGW+NH+YMPLQFRVIFHSFVACCWGIFLNLRAR+M+L
Sbjct: 145 KTRVKKQYPSVQLSAWMFWPIVGWINHMYMPLQFRVIFHSFVACCWGIFLNLRARAMSL 203