BLASTX nr result

ID: Coptis23_contig00004205 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00004205
         (1479 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002282029.1| PREDICTED: uncharacterized protein LOC100261...   421   e-115
ref|XP_002308463.1| predicted protein [Populus trichocarpa] gi|2...   418   e-114
ref|XP_002530342.1| conserved hypothetical protein [Ricinus comm...   417   e-114
ref|XP_004143326.1| PREDICTED: uncharacterized protein LOC101214...   417   e-114
ref|XP_003518208.1| PREDICTED: uncharacterized protein LOC100778...   409   e-112

>ref|XP_002282029.1| PREDICTED: uncharacterized protein LOC100261394 [Vitis vinifera]
            gi|147792025|emb|CAN62037.1| hypothetical protein
            VITISV_021370 [Vitis vinifera]
            gi|297740143|emb|CBI30325.3| unnamed protein product
            [Vitis vinifera]
          Length = 315

 Score =  421 bits (1083), Expect = e-115
 Identities = 215/287 (74%), Positives = 236/287 (82%), Gaps = 5/287 (1%)
 Frame = -3

Query: 1354 SFYGKPNLVSFSATNSHSRIVSCSATENSS----GDKSSSSFCIIEGPETVQDFVQMQMK 1187
            + +G P  +S     S S+I+  S  + S     GD + S+FCIIEGPETVQDFVQMQ++
Sbjct: 29   ALHGNPKRLSLHRRISRSQIICASGKDFSDPLPDGDTNPSNFCIIEGPETVQDFVQMQVQ 88

Query: 1186 EIQDNIKSRRNKIFLLMEEVRRLRVQKRIKRTKVIDEISEE-ADEMPDIPSSIPFLPHVX 1010
            EIQDNI SRRNKIFLLMEEVRRLRVQ+RIK  KV DE  EE A+EMPD+PSSIPFLPHV 
Sbjct: 89   EIQDNISSRRNKIFLLMEEVRRLRVQQRIKSVKVFDENGEEEANEMPDMPSSIPFLPHVT 148

Query: 1009 XXXXXXXXXTSFSFISGIIVFGGLLAPVLELKLGIGGTSYEDFIRNMHLPMQLSQVDPIV 830
                     TSFSFIS II+FGGLLAP LELKLG+GGTSYEDFIR+MHLPMQLSQVDPIV
Sbjct: 149  KRTLKQLYLTSFSFISAIIIFGGLLAPTLELKLGLGGTSYEDFIRSMHLPMQLSQVDPIV 208

Query: 829  ASFSGGAVGVISALMLIEVNNVEQQEKKRCKYCHGTGYLACARCSASGVCLSIEPISIAC 650
            ASFSGGAVGVISALMLIE NNVEQ EKKRCKYC+G GYL CARCSASGVCLSIEPIS++ 
Sbjct: 209  ASFSGGAVGVISALMLIEANNVEQHEKKRCKYCNGKGYLPCARCSASGVCLSIEPISVSS 268

Query: 649  GSDRPLRAPTTQRCINCSGAGKVMCPTCLCTGMVMASEHDLRIDPFD 509
             SDRPL+AP T+RC NCSG GKVMCPTCLCTGMVMASEHD RIDPFD
Sbjct: 269  ASDRPLKAPATRRCPNCSGVGKVMCPTCLCTGMVMASEHDPRIDPFD 315


>ref|XP_002308463.1| predicted protein [Populus trichocarpa] gi|222854439|gb|EEE91986.1|
            predicted protein [Populus trichocarpa]
          Length = 248

 Score =  418 bits (1075), Expect = e-114
 Identities = 207/248 (83%), Positives = 223/248 (89%), Gaps = 1/248 (0%)
 Frame = -3

Query: 1249 SSFCIIEGPETVQDFVQMQMKEIQDNIKSRRNKIFLLMEEVRRLRVQKRIKRTKVIDEIS 1070
            S+FCIIEGPETVQDFVQMQM+EIQDNI+SRRNKIFLLMEEVRRLRVQ+RIK  KV+DE  
Sbjct: 1    SNFCIIEGPETVQDFVQMQMQEIQDNIRSRRNKIFLLMEEVRRLRVQQRIKNLKVVDESG 60

Query: 1069 EE-ADEMPDIPSSIPFLPHVXXXXXXXXXXTSFSFISGIIVFGGLLAPVLELKLGIGGTS 893
            EE ADEMPD+PSSIPFLPHV          TSFSFISGII+FGGL+AP LELKLG+GGTS
Sbjct: 61   EEDADEMPDMPSSIPFLPHVTPKTLRQLYLTSFSFISGIILFGGLIAPTLELKLGLGGTS 120

Query: 892  YEDFIRNMHLPMQLSQVDPIVASFSGGAVGVISALMLIEVNNVEQQEKKRCKYCHGTGYL 713
            YEDFIR+MHLP+QLS VDPIVASF GGAVGVIS+LMLIEVNNVEQQEKKRCKYCHGTGYL
Sbjct: 121  YEDFIRSMHLPLQLSMVDPIVASFVGGAVGVISSLMLIEVNNVEQQEKKRCKYCHGTGYL 180

Query: 712  ACARCSASGVCLSIEPISIACGSDRPLRAPTTQRCINCSGAGKVMCPTCLCTGMVMASEH 533
            ACARCSASGVCLSI+PIS++  SDRPL+ P TQRC NCSGAGKVMCPTCLCTGMVMASEH
Sbjct: 181  ACARCSASGVCLSIDPISLSSASDRPLQVPATQRCPNCSGAGKVMCPTCLCTGMVMASEH 240

Query: 532  DLRIDPFD 509
            D R DPFD
Sbjct: 241  DPRFDPFD 248


>ref|XP_002530342.1| conserved hypothetical protein [Ricinus communis]
            gi|223530146|gb|EEF32058.1| conserved hypothetical
            protein [Ricinus communis]
          Length = 307

 Score =  417 bits (1072), Expect = e-114
 Identities = 223/298 (74%), Positives = 242/298 (81%), Gaps = 8/298 (2%)
 Frame = -3

Query: 1378 FISNNNNHSFYGKPNLVSFSATNSHSRIVSCSATENSSGD---KSSSSFCIIEGPETVQD 1208
            FIS NNN S   KP         S  R++  S   NSS       SS+FCIIEGPETVQD
Sbjct: 18   FISINNNKS---KPK-----QRISKFRLLCSSPPINSSDSVPSADSSNFCIIEGPETVQD 69

Query: 1207 FVQMQMKEIQDNIKSRRNKIFLLMEEVRRLRVQKRIKR--TKVIDEIS---EEADEMPDI 1043
            FVQMQ++EIQDNI+SRRNKIFLLMEEVRRLRVQ+RIKR   K+IDE     E+ DEMPDI
Sbjct: 70   FVQMQLQEIQDNIRSRRNKIFLLMEEVRRLRVQQRIKRKTVKIIDETGQKEEDTDEMPDI 129

Query: 1042 PSSIPFLPHVXXXXXXXXXXTSFSFISGIIVFGGLLAPVLELKLGIGGTSYEDFIRNMHL 863
            PSSIPFLP V          TS SFISGIIVFGGL+AP LELKLGIGGTSYEDFI ++HL
Sbjct: 130  PSSIPFLPRVTPKTLKQLYLTSLSFISGIIVFGGLIAPTLELKLGIGGTSYEDFICSLHL 189

Query: 862  PMQLSQVDPIVASFSGGAVGVISALMLIEVNNVEQQEKKRCKYCHGTGYLACARCSASGV 683
            P+QLSQVDPIVASFSGGAVGVISALMLIE NNVEQQEKKRCKYCHGTGYLACARCSASGV
Sbjct: 190  PLQLSQVDPIVASFSGGAVGVISALMLIEANNVEQQEKKRCKYCHGTGYLACARCSASGV 249

Query: 682  CLSIEPISIACGSDRPLRAPTTQRCINCSGAGKVMCPTCLCTGMVMASEHDLRIDPFD 509
            CLSI+PIS++  SD+PLR PTTQRCINCSGAGKVMCPTCLCTGM+MASEHD RI+PFD
Sbjct: 250  CLSIDPISLSSISDQPLRVPTTQRCINCSGAGKVMCPTCLCTGMLMASEHDPRIEPFD 307


>ref|XP_004143326.1| PREDICTED: uncharacterized protein LOC101214251 [Cucumis sativus]
            gi|449508430|ref|XP_004163310.1| PREDICTED:
            uncharacterized LOC101214251 [Cucumis sativus]
          Length = 324

 Score =  417 bits (1071), Expect = e-114
 Identities = 208/260 (80%), Positives = 225/260 (86%), Gaps = 1/260 (0%)
 Frame = -3

Query: 1285 SATENSSGDKSSSSFCIIEGPETVQDFVQMQMKEIQDNIKSRRNKIFLLMEEVRRLRVQK 1106
            SA+  S  D +SS+FCIIEGPETVQDFVQMQ +EIQDNI+SRRNKIFLLMEEVRRLR+Q+
Sbjct: 65   SASVPSDSDNTSSNFCIIEGPETVQDFVQMQFQEIQDNIRSRRNKIFLLMEEVRRLRIQQ 124

Query: 1105 RIKRTKVIDEIS-EEADEMPDIPSSIPFLPHVXXXXXXXXXXTSFSFISGIIVFGGLLAP 929
            R+K  K IDE   EEA+EMPDIPSSIPFLPHV          TS S I GIIVFGGL+AP
Sbjct: 125  RLKNLKPIDENDIEEANEMPDIPSSIPFLPHVTPKTLKQQYLTSLSVIWGIIVFGGLIAP 184

Query: 928  VLELKLGIGGTSYEDFIRNMHLPMQLSQVDPIVASFSGGAVGVISALMLIEVNNVEQQEK 749
             LELKLG+GGTSYEDFIRNMHLPMQLSQVDPIVASFSGGAVGVISALMLIE NNVEQQEK
Sbjct: 185  TLELKLGLGGTSYEDFIRNMHLPMQLSQVDPIVASFSGGAVGVISALMLIEANNVEQQEK 244

Query: 748  KRCKYCHGTGYLACARCSASGVCLSIEPISIACGSDRPLRAPTTQRCINCSGAGKVMCPT 569
            KRCKYCHGTGYLACARCS+SGVCLS +PIS++  S RPLR P TQRC+NCSGAGKVMCPT
Sbjct: 245  KRCKYCHGTGYLACARCSSSGVCLSADPISLSASSSRPLRMPKTQRCLNCSGAGKVMCPT 304

Query: 568  CLCTGMVMASEHDLRIDPFD 509
            CLCTGM+MASEHD R DPFD
Sbjct: 305  CLCTGMLMASEHDPRFDPFD 324


>ref|XP_003518208.1| PREDICTED: uncharacterized protein LOC100778068 [Glycine max]
          Length = 319

 Score =  409 bits (1052), Expect = e-112
 Identities = 211/293 (72%), Positives = 235/293 (80%), Gaps = 2/293 (0%)
 Frame = -3

Query: 1381 LFISNNNNHSFYGKPNLVSFSATNSHSRIVSCSATENSSGDKSSSSFCIIEGPETVQDFV 1202
            LF  N    +F    NL+      +    V  S  +  S D + S+FCIIEGPET++DFV
Sbjct: 31   LFKGNTKQFTFSKATNLLQLQPRIT----VFSSLKDAGSSDNTPSNFCIIEGPETIEDFV 86

Query: 1201 QMQMKEIQDNIKSRRNKIFLLMEEVRRLRVQKRIKR-TKVIDEISEEA-DEMPDIPSSIP 1028
            QMQ++EIQDNIKSRRNKIFLLMEEVRRLRVQ+R +R  KV++E  EE  DEMPDIPSSIP
Sbjct: 87   QMQLQEIQDNIKSRRNKIFLLMEEVRRLRVQQRTRRGQKVVNEEGEEKPDEMPDIPSSIP 146

Query: 1027 FLPHVXXXXXXXXXXTSFSFISGIIVFGGLLAPVLELKLGIGGTSYEDFIRNMHLPMQLS 848
            FL HV          TS SFIS IIVFGGL+AP LELKLG+GGTSYEDFIR+MHLP+QLS
Sbjct: 147  FLSHVTPKTLKKLYLTSMSFISAIIVFGGLIAPTLELKLGLGGTSYEDFIRSMHLPLQLS 206

Query: 847  QVDPIVASFSGGAVGVISALMLIEVNNVEQQEKKRCKYCHGTGYLACARCSASGVCLSIE 668
            QVDPIVASFSGGAVGVIS LMLIE NNVEQQEKKRCKYCHGTGYLACARCSASGVCL+I+
Sbjct: 207  QVDPIVASFSGGAVGVISVLMLIEANNVEQQEKKRCKYCHGTGYLACARCSASGVCLNID 266

Query: 667  PISIACGSDRPLRAPTTQRCINCSGAGKVMCPTCLCTGMVMASEHDLRIDPFD 509
            PIS+   S RPL APTT+RC NCSGAGKVMCP+CLCTGM+MASEHDLRIDPFD
Sbjct: 267  PISVCSASARPLHAPTTRRCPNCSGAGKVMCPSCLCTGMMMASEHDLRIDPFD 319


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