BLASTX nr result

ID: Coptis23_contig00004203 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00004203
         (1414 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI19106.3| unnamed protein product [Vitis vinifera]              506   e-141
ref|XP_002284289.1| PREDICTED: alkylated DNA repair protein alkB...   506   e-141
ref|XP_002513858.1| S-adenosylmethionine-dependent methyltransfe...   491   e-136
ref|XP_002302272.1| predicted protein [Populus trichocarpa] gi|2...   475   e-131
ref|XP_004138641.1| PREDICTED: alkylated DNA repair protein alkB...   460   e-127

>emb|CBI19106.3| unnamed protein product [Vitis vinifera]
          Length = 391

 Score =  506 bits (1304), Expect = e-141
 Identities = 257/350 (73%), Positives = 295/350 (84%), Gaps = 5/350 (1%)
 Frame = -3

Query: 1127 EAASILPSCVSEGLSDMPSLSMKVTTDQKC-YSSVQSTPEIEKKYVHHVYDAIAPHFSST 951
            + AS L + VS+G S     S+ V+ DQ C  S+VQSTPEIEKKYVHHVYDAIAPHFSST
Sbjct: 44   DMASSLCTLVSDGESHTQP-SLIVSQDQICPVSNVQSTPEIEKKYVHHVYDAIAPHFSST 102

Query: 950  RFAKWPKVSTFLNSLPEGSLVLDAGCGNGKYLGLNPDCFYVGCDISPSLINICAGRGHEV 771
            RFAKWPKV+TFL SLP GSLVLDAGCGNGKYLGL+PDCF++GCDIS  LINICA R HEV
Sbjct: 103  RFAKWPKVATFLKSLPSGSLVLDAGCGNGKYLGLSPDCFFIGCDISAPLINICADRDHEV 162

Query: 770  LVADAVILPYRTGFGDAAISIAVLHHLSTESRRRKAIQELIRVVRKGGLVLITVWAVEQE 591
            +VADAV LPYRTGFGDAAISIAVLHHLSTESRR+KAIQEL+RVV+KGGLVLITVWAVEQE
Sbjct: 163  VVADAVNLPYRTGFGDAAISIAVLHHLSTESRRKKAIQELVRVVKKGGLVLITVWAVEQE 222

Query: 590  DSALVTKWTPLTHK-LEEWVGPGSPRVRSPSTLTLKSIPETEDNCSGNRLKVIAEQSEDK 414
            D +LVTKWTPL+ K +EEW+GP SPR+RSPS+ TL+SIPETE+N SG  LK + E S + 
Sbjct: 223  DRSLVTKWTPLSPKYVEEWIGPSSPRIRSPSSFTLESIPETEENGSGEHLKDLKEISNEN 282

Query: 413  MEMDAHATSEMGSTSEAPGTRSIKGN---QQEYFVPWHLPYHRAEITGHSACALANGLAK 243
            ++   H+T +   T +   T  IK N    QEYFVPWHLPYHRAE++G SACALANGLAK
Sbjct: 283  LQDTMHSTCQ---TEDDSMTFKIKKNIESHQEYFVPWHLPYHRAEVSGASACALANGLAK 339

Query: 242  KDEKKGAVVYNRYYHVFMEGELERLVSGIENAVILDKFYDKSNWCIILKK 93
            KD+KKGAVVYNRYYHVF EGELERLVSG++NAVI+D+F+DKSNWCIIL+K
Sbjct: 340  KDDKKGAVVYNRYYHVFSEGELERLVSGMDNAVIVDQFFDKSNWCIILEK 389


>ref|XP_002284289.1| PREDICTED: alkylated DNA repair protein alkB homolog 8 [Vitis
            vinifera]
          Length = 347

 Score =  506 bits (1303), Expect = e-141
 Identities = 257/348 (73%), Positives = 294/348 (84%), Gaps = 5/348 (1%)
 Frame = -3

Query: 1121 ASILPSCVSEGLSDMPSLSMKVTTDQKC-YSSVQSTPEIEKKYVHHVYDAIAPHFSSTRF 945
            AS L + VS+G S     S+ V+ DQ C  S+VQSTPEIEKKYVHHVYDAIAPHFSSTRF
Sbjct: 2    ASSLCTLVSDGESHTQP-SLIVSQDQICPVSNVQSTPEIEKKYVHHVYDAIAPHFSSTRF 60

Query: 944  AKWPKVSTFLNSLPEGSLVLDAGCGNGKYLGLNPDCFYVGCDISPSLINICAGRGHEVLV 765
            AKWPKV+TFL SLP GSLVLDAGCGNGKYLGL+PDCF++GCDIS  LINICA R HEV+V
Sbjct: 61   AKWPKVATFLKSLPSGSLVLDAGCGNGKYLGLSPDCFFIGCDISAPLINICADRDHEVVV 120

Query: 764  ADAVILPYRTGFGDAAISIAVLHHLSTESRRRKAIQELIRVVRKGGLVLITVWAVEQEDS 585
            ADAV LPYRTGFGDAAISIAVLHHLSTESRR+KAIQEL+RVV+KGGLVLITVWAVEQED 
Sbjct: 121  ADAVNLPYRTGFGDAAISIAVLHHLSTESRRKKAIQELVRVVKKGGLVLITVWAVEQEDR 180

Query: 584  ALVTKWTPLTHK-LEEWVGPGSPRVRSPSTLTLKSIPETEDNCSGNRLKVIAEQSEDKME 408
            +LVTKWTPL+ K +EEW+GP SPR+RSPS+ TL+SIPETE+N SG  LK + E S + ++
Sbjct: 181  SLVTKWTPLSPKYVEEWIGPSSPRIRSPSSFTLESIPETEENGSGEHLKDLKEISNENLQ 240

Query: 407  MDAHATSEMGSTSEAPGTRSIKGN---QQEYFVPWHLPYHRAEITGHSACALANGLAKKD 237
               H+T +   T +   T  IK N    QEYFVPWHLPYHRAE++G SACALANGLAKKD
Sbjct: 241  DTMHSTCQ---TEDDSMTFKIKKNIESHQEYFVPWHLPYHRAEVSGASACALANGLAKKD 297

Query: 236  EKKGAVVYNRYYHVFMEGELERLVSGIENAVILDKFYDKSNWCIILKK 93
            +KKGAVVYNRYYHVF EGELERLVSG++NAVI+D+F+DKSNWCIIL+K
Sbjct: 298  DKKGAVVYNRYYHVFSEGELERLVSGMDNAVIVDQFFDKSNWCIILEK 345


>ref|XP_002513858.1| S-adenosylmethionine-dependent methyltransferase, putative [Ricinus
            communis] gi|223546944|gb|EEF48441.1|
            S-adenosylmethionine-dependent methyltransferase,
            putative [Ricinus communis]
          Length = 390

 Score =  491 bits (1263), Expect = e-136
 Identities = 243/344 (70%), Positives = 286/344 (83%), Gaps = 5/344 (1%)
 Frame = -3

Query: 1109 PSCVSEGLSDMPS---LSMKVTTDQKCYSS-VQSTPEIEKKYVHHVYDAIAPHFSSTRFA 942
            PS +S   SD  S   LS+     Q C SS VQSTPEIEKKYVHHVYDAIAPHFSSTRFA
Sbjct: 46   PSGLSNVASDGESQIQLSLSADEKQVCSSSSVQSTPEIEKKYVHHVYDAIAPHFSSTRFA 105

Query: 941  KWPKVSTFLNSLPEGSLVLDAGCGNGKYLGLNPDCFYVGCDISPSLINICAGRGHEVLVA 762
            KWPKV+TFLNSLP GSL+LDAGCGNGKYLGLNPDC+++GCDIS  LI ICA RGHEVLV 
Sbjct: 106  KWPKVATFLNSLPSGSLILDAGCGNGKYLGLNPDCYFIGCDISAPLIKICADRGHEVLVG 165

Query: 761  DAVILPYRTGFGDAAISIAVLHHLSTESRRRKAIQELIRVVRKGGLVLITVWAVEQEDSA 582
            DAV LPYRTGF DAAISIAVLHHLSTE+RR+KAI+EL+RVV+KGGLVLITVWAVEQED +
Sbjct: 166  DAVNLPYRTGFSDAAISIAVLHHLSTENRRKKAIEELVRVVKKGGLVLITVWAVEQEDGS 225

Query: 581  LVTKWTPLTHK-LEEWVGPGSPRVRSPSTLTLKSIPETEDNCSGNRLKVIAEQSEDKMEM 405
            LV KWTPL+ K +EEW+GPGSPRVRSPS+ TL+SIPETE+N S   ++   + ++++   
Sbjct: 226  LVAKWTPLSQKYVEEWIGPGSPRVRSPSSFTLESIPETEENNSKELIQDSEKNADEEFMK 285

Query: 404  DAHATSEMGSTSEAPGTRSIKGNQQEYFVPWHLPYHRAEITGHSACALANGLAKKDEKKG 225
               + S+    S     ++ K NQQEYFVPWHLPYHRAE++G SACALA+GLAKKD+KKG
Sbjct: 286  TMDSISQTEHNSVFKDEKNAK-NQQEYFVPWHLPYHRAEVSGASACALASGLAKKDDKKG 344

Query: 224  AVVYNRYYHVFMEGELERLVSGIENAVILDKFYDKSNWCIILKK 93
            AVVYNRYYHVF EGELERLV+G++NAV++D+F+DKSNWC+IL+K
Sbjct: 345  AVVYNRYYHVFSEGELERLVTGMKNAVVVDRFFDKSNWCVILEK 388


>ref|XP_002302272.1| predicted protein [Populus trichocarpa] gi|222843998|gb|EEE81545.1|
            predicted protein [Populus trichocarpa]
          Length = 369

 Score =  475 bits (1223), Expect = e-131
 Identities = 245/364 (67%), Positives = 282/364 (77%), Gaps = 22/364 (6%)
 Frame = -3

Query: 1118 SILPSCVSEGLSDMPSLSMKVTTDQKCYSSVQSTPEIEKKYVHHVYDAIAPHFSSTRFAK 939
            S L + VS+G S +  + + V  +    SSVQSTPEIEK YVH VYDAIAPHFSSTRFAK
Sbjct: 10   SCLRTLVSDGESHVQPMPL-VEEETGSSSSVQSTPEIEKNYVHRVYDAIAPHFSSTRFAK 68

Query: 938  WPKVSTFLNSLPEGSLVLDAGCGNGKYLGLNPDCFYVGCDISPSLINICAGRGHEVLVAD 759
            WPKV+TFLNSLP GSLVLDAGCGNGKYLG NPDC +VGCDIS  LI ICA RGHEVLVAD
Sbjct: 69   WPKVATFLNSLPSGSLVLDAGCGNGKYLGFNPDCTFVGCDISGPLIKICADRGHEVLVAD 128

Query: 758  AVILPYRTGFGDAAISIAVLHHLSTESRRRKAIQELIRVVRKGGLVLITVWAVEQEDSAL 579
            AV LPYRTGFGDAAISIAVLHHLSTE+RR++AI EL+R V+KGGL+LITVWAVEQED +L
Sbjct: 129  AVNLPYRTGFGDAAISIAVLHHLSTENRRKRAIDELVRAVKKGGLILITVWAVEQEDRSL 188

Query: 578  VTKWTPLTHK-LEEWVGPGSPRVRSPSTLTLKSIPETEDNCSGNR--------------L 444
            VTKWTPL  K ++EW+GPGSPR+RSPS++TL+SIPETE+N   +               L
Sbjct: 189  VTKWTPLNQKYVDEWIGPGSPRIRSPSSITLESIPETENNSKEHEKDTESLNHNPSPITL 248

Query: 443  KVIAEQSEDKMEMDAHATS-------EMGSTSEAPGTRSIKGNQQEYFVPWHLPYHRAEI 285
            + I E   +  E +    S        M STS+     S   NQQEYFVPWHLPYHRAE+
Sbjct: 249  ESIPETENNSKEHEKDTESLNHEFKGTMPSTSK---DDSSVQNQQEYFVPWHLPYHRAEV 305

Query: 284  TGHSACALANGLAKKDEKKGAVVYNRYYHVFMEGELERLVSGIENAVILDKFYDKSNWCI 105
            +G SACAL NGLAKKD+KKGAVVYNRYYHVF EGELERLVSG+ NAV++D+F+DKSNWCI
Sbjct: 306  SGASACALENGLAKKDDKKGAVVYNRYYHVFSEGELERLVSGMNNAVVVDRFFDKSNWCI 365

Query: 104  ILKK 93
            IL+K
Sbjct: 366  ILQK 369


>ref|XP_004138641.1| PREDICTED: alkylated DNA repair protein alkB homolog 8-like [Cucumis
            sativus] gi|449490102|ref|XP_004158508.1| PREDICTED:
            alkylated DNA repair protein alkB homolog 8-like [Cucumis
            sativus]
          Length = 391

 Score =  460 bits (1183), Expect = e-127
 Identities = 226/316 (71%), Positives = 263/316 (83%), Gaps = 1/316 (0%)
 Frame = -3

Query: 1034 SSVQSTPEIEKKYVHHVYDAIAPHFSSTRFAKWPKVSTFLNSLPEGSLVLDAGCGNGKYL 855
            S+VQ TPEIEKKYVH VYDAIAPHFSSTRFAKWPKV++FL+SLP GSLVLDAGCGNGKYL
Sbjct: 75   SNVQCTPEIEKKYVHRVYDAIAPHFSSTRFAKWPKVASFLSSLPLGSLVLDAGCGNGKYL 134

Query: 854  GLNPDCFYVGCDISPSLINICAGRGHEVLVADAVILPYRTGFGDAAISIAVLHHLSTESR 675
            G N +CF++GCDIS  LI IC  RGHEVLVADAV LPYRTGFGDAAISIAVLHHLSTE+R
Sbjct: 135  GYNSNCFFIGCDISAQLIKICNERGHEVLVADAVNLPYRTGFGDAAISIAVLHHLSTENR 194

Query: 674  RRKAIQELIRVVRKGGLVLITVWAVEQEDSALVTKWTPLTHK-LEEWVGPGSPRVRSPST 498
            R+KAI+ELIRVV+KGGLVLITVWAVEQED +L+TKW PL+ K +EEWVGPGSPRVRSPS+
Sbjct: 195  RKKAIEELIRVVKKGGLVLITVWAVEQEDKSLLTKWMPLSEKYVEEWVGPGSPRVRSPSS 254

Query: 497  LTLKSIPETEDNCSGNRLKVIAEQSEDKMEMDAHATSEMGSTSEAPGTRSIKGNQQEYFV 318
            + L+SIPE  +N SG  LK   E     +  +    S+  +        ++   QQEYFV
Sbjct: 255  MALESIPEMNENNSGICLKDSKENLTGSIPENKPPPSQSENDLANCNHENLLKTQQEYFV 314

Query: 317  PWHLPYHRAEITGHSACALANGLAKKDEKKGAVVYNRYYHVFMEGELERLVSGIENAVIL 138
            PWHLPYHRAE++G SA ALA+GLAKKD+KK AVVYNRYYHVF EGELE L+SG++NAV++
Sbjct: 315  PWHLPYHRAEVSGTSASALASGLAKKDDKKAAVVYNRYYHVFSEGELEGLISGMDNAVVV 374

Query: 137  DKFYDKSNWCIILKKL 90
            D+FYDKSNWCI+L+KL
Sbjct: 375  DRFYDKSNWCIVLEKL 390


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