BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00004199
         (852 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN68722.1| hypothetical protein VITISV_033681 [Vitis vinifera]   257   2e-66
ref|XP_002268489.1| PREDICTED: probable ribosome biogenesis prot...   256   3e-66
ref|XP_003551069.1| PREDICTED: probable ribosome biogenesis prot...   251   1e-64
ref|NP_001236121.1| uncharacterized protein LOC100306000 [Glycin...   249   4e-64
ref|XP_002283418.1| PREDICTED: probable ribosome biogenesis prot...   248   9e-64

>emb|CAN68722.1| hypothetical protein VITISV_033681 [Vitis vinifera]
          Length = 1073

 Score =  257 bits (657), Expect = 2e-66
 Identities = 129/174 (74%), Positives = 139/174 (79%), Gaps = 5/174 (2%)
 Frame = -2

Query: 851 MRLEKCWFCSSTVYPGHGIQFVRNDAKIFRFCRSKCHKNFKMKRNPRKVKWTKAYRRLHG 672
           MRLEKCWFCSSTVYPGHGIQFVRNDAKIFRFCRSKCHKNFKMKRNPRKVKWTKAYRRLHG
Sbjct: 57  MRLEKCWFCSSTVYPGHGIQFVRNDAKIFRFCRSKCHKNFKMKRNPRKVKWTKAYRRLHG 116

Query: 671 KDMTQDSTFEFERKRNRPERYDRDIVENTLKAIKKIDKVRVAREETHHKIRMGGXXXXXX 492
           KDMTQDSTFEFERKRNRPERYDR++ ENTLKAIKKIDKVRV RE  HH +RM G      
Sbjct: 117 KDMTQDSTFEFERKRNRPERYDRNVAENTLKAIKKIDKVRVDREARHHALRMKGKKAKEQ 176

Query: 491 XXXXXXXEQSINMVKAPGAVS-----LLPARKHKVPQQQTQENRAMEE*CYVSF 345
                  EQSI+MVKAP  +       LP  K KV QQQ++EN AMEE C+ ++
Sbjct: 177 REAAKELEQSIHMVKAPAVLQQEPSLTLPKIKVKVSQQQSEENHAMEE-CFSTY 229


>ref|XP_002268489.1| PREDICTED: probable ribosome biogenesis protein RLP24 [Vitis
           vinifera] gi|297734845|emb|CBI17079.3| unnamed protein
           product [Vitis vinifera]
          Length = 168

 Score =  256 bits (655), Expect = 3e-66
 Identities = 128/168 (76%), Positives = 135/168 (80%), Gaps = 5/168 (2%)
 Frame = -2

Query: 851 MRLEKCWFCSSTVYPGHGIQFVRNDAKIFRFCRSKCHKNFKMKRNPRKVKWTKAYRRLHG 672
           MRLEKCWFCSSTVYPGHGIQFVRNDAKIFRFCRSKCHKNFKMKRNPRKVKWTKAYRRLHG
Sbjct: 1   MRLEKCWFCSSTVYPGHGIQFVRNDAKIFRFCRSKCHKNFKMKRNPRKVKWTKAYRRLHG 60

Query: 671 KDMTQDSTFEFERKRNRPERYDRDIVENTLKAIKKIDKVRVAREETHHKIRMGGXXXXXX 492
           KDMTQDSTFEFERKRNRPERYDR++ ENTLKAIKKIDKVRV RE  HH +RM G      
Sbjct: 61  KDMTQDSTFEFERKRNRPERYDRNVAENTLKAIKKIDKVRVDREARHHALRMKGKKAKEQ 120

Query: 491 XXXXXXXEQSINMVKAPGAVS-----LLPARKHKVPQQQTQENRAMEE 363
                  EQSI+MVKAP  +       LP  K KV QQQ++EN AMEE
Sbjct: 121 REAAKELEQSIHMVKAPAVLQQEPSLTLPKIKVKVSQQQSEENHAMEE 168


>ref|XP_003551069.1| PREDICTED: probable ribosome biogenesis protein RLP24-like [Glycine
           max]
          Length = 168

 Score =  251 bits (641), Expect = 1e-64
 Identities = 124/168 (73%), Positives = 133/168 (79%), Gaps = 5/168 (2%)
 Frame = -2

Query: 851 MRLEKCWFCSSTVYPGHGIQFVRNDAKIFRFCRSKCHKNFKMKRNPRKVKWTKAYRRLHG 672
           MRLEKCWFCSSTVYPGHGIQFVRNDAKIFRFCRSKCHKNFKMKRNPRKVKWTKAYRR+HG
Sbjct: 1   MRLEKCWFCSSTVYPGHGIQFVRNDAKIFRFCRSKCHKNFKMKRNPRKVKWTKAYRRVHG 60

Query: 671 KDMTQDSTFEFERKRNRPERYDRDIVENTLKAIKKIDKVRVAREETHHKIRMGGXXXXXX 492
           KDMTQDSTFEFERKRNRPERYDR++ EN LKAI KIDK+RV REE HHK RM G      
Sbjct: 61  KDMTQDSTFEFERKRNRPERYDRNLAENVLKAIPKIDKIRVTREERHHKNRMKGKKEKLL 120

Query: 491 XXXXXXXEQSINMVKAPGAVS-----LLPARKHKVPQQQTQENRAMEE 363
                  EQ I++VKAP  +       LP  K KV QQQ++EN AMEE
Sbjct: 121 KEAVKELEQGISLVKAPSVLQQDPSLTLPKIKVKVSQQQSEENHAMEE 168


>ref|NP_001236121.1| uncharacterized protein LOC100306000 [Glycine max]
           gi|255627233|gb|ACU13961.1| unknown [Glycine max]
          Length = 168

 Score =  249 bits (637), Expect = 4e-64
 Identities = 122/168 (72%), Positives = 133/168 (79%), Gaps = 5/168 (2%)
 Frame = -2

Query: 851 MRLEKCWFCSSTVYPGHGIQFVRNDAKIFRFCRSKCHKNFKMKRNPRKVKWTKAYRRLHG 672
           MRLEKCWFCSST+YPGHGIQFVRNDAKIFRFCRSKCHKNFKMKRNPRKVKWTKAYRR+HG
Sbjct: 1   MRLEKCWFCSSTIYPGHGIQFVRNDAKIFRFCRSKCHKNFKMKRNPRKVKWTKAYRRVHG 60

Query: 671 KDMTQDSTFEFERKRNRPERYDRDIVENTLKAIKKIDKVRVAREETHHKIRMGGXXXXXX 492
           KDMTQDSTFEFERKRNRPERYDR++ EN LK I KIDK+RV+REE HHK RM G      
Sbjct: 61  KDMTQDSTFEFERKRNRPERYDRNLAENVLKVIPKIDKIRVSREERHHKNRMKGKKEKLL 120

Query: 491 XXXXXXXEQSINMVKAPGAVS-----LLPARKHKVPQQQTQENRAMEE 363
                  EQ I++VKAP  +       LP  K KV QQQ++EN AMEE
Sbjct: 121 KEAVKELEQGISLVKAPSVLQQDPSLTLPKIKVKVSQQQSEENHAMEE 168


>ref|XP_002283418.1| PREDICTED: probable ribosome biogenesis protein RLP24 [Vitis
           vinifera] gi|297740070|emb|CBI30252.3| unnamed protein
           product [Vitis vinifera]
          Length = 168

 Score =  248 bits (634), Expect = 9e-64
 Identities = 124/168 (73%), Positives = 131/168 (77%), Gaps = 5/168 (2%)
 Frame = -2

Query: 851 MRLEKCWFCSSTVYPGHGIQFVRNDAKIFRFCRSKCHKNFKMKRNPRKVKWTKAYRRLHG 672
           MRLEKCWFCSSTVYPGHGIQFVRNDAKIFRFCRSKCHKNFKMKRNPRKVKWTKAYRRLHG
Sbjct: 1   MRLEKCWFCSSTVYPGHGIQFVRNDAKIFRFCRSKCHKNFKMKRNPRKVKWTKAYRRLHG 60

Query: 671 KDMTQDSTFEFERKRNRPERYDRDIVENTLKAIKKIDKVRVAREETHHKIRMGGXXXXXX 492
           KDMTQDSTFEFERKRNRPERYDR++ ENTLKAIKKIDKVRV RE  HH +RM G      
Sbjct: 61  KDMTQDSTFEFERKRNRPERYDRNLAENTLKAIKKIDKVRVDREARHHALRMKGKKAKEQ 120

Query: 491 XXXXXXXEQSINMVKAPGAVS-----LLPARKHKVPQQQTQENRAMEE 363
                  EQ I+MVKAP  +       LP  K KV + Q +EN  MEE
Sbjct: 121 REAAKELEQGIHMVKAPAVLEKEPSLTLPKIKVKVSRPQAEENHPMEE 168