BLASTX nr result
ID: Coptis23_contig00004195
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis23_contig00004195 (350 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_004134127.1| PREDICTED: protein RDM1-like isoform 1 [Cucu... 93 3e-17 ref|XP_002311634.1| predicted protein [Populus trichocarpa] gi|2... 92 6e-17 ref|XP_003610752.1| hypothetical protein MTR_5g006610 [Medicago ... 87 1e-15 ref|XP_002883375.1| predicted protein [Arabidopsis lyrata subsp.... 87 1e-15 dbj|BAJ96476.1| predicted protein [Hordeum vulgare subsp. vulgare] 87 2e-15 >ref|XP_004134127.1| PREDICTED: protein RDM1-like isoform 1 [Cucumis sativus] gi|449432682|ref|XP_004134128.1| PREDICTED: protein RDM1-like isoform 2 [Cucumis sativus] gi|449504162|ref|XP_004162269.1| PREDICTED: protein RDM1-like isoform 1 [Cucumis sativus] gi|449504166|ref|XP_004162270.1| PREDICTED: protein RDM1-like isoform 2 [Cucumis sativus] Length = 174 Score = 92.8 bits (229), Expect = 3e-17 Identities = 39/55 (70%), Positives = 46/55 (83%) Frame = -1 Query: 350 EHQPLDAVIHPRKAEATIWLMEEIHRLTSSHHHLGNLWLLDPMHHAFVDPIIPQI 186 E++PLD VIHP KAEAT+WL+EEIHR TSSHHH+ LWL DPMH A+VD I PQ+ Sbjct: 120 EYKPLDTVIHPSKAEATVWLVEEIHRRTSSHHHVAKLWLSDPMHQAYVDSIFPQL 174 >ref|XP_002311634.1| predicted protein [Populus trichocarpa] gi|222851454|gb|EEE89001.1| predicted protein [Populus trichocarpa] Length = 175 Score = 91.7 bits (226), Expect = 6e-17 Identities = 38/55 (69%), Positives = 45/55 (81%) Frame = -1 Query: 350 EHQPLDAVIHPRKAEATIWLMEEIHRLTSSHHHLGNLWLLDPMHHAFVDPIIPQI 186 EH PLD +IHP KAEATIWL+EE+HR TSSHHH+ +W DPMHHAFVD I P++ Sbjct: 121 EHTPLDIMIHPCKAEATIWLVEEVHRRTSSHHHVAKIWQSDPMHHAFVDSIFPKL 175 >ref|XP_003610752.1| hypothetical protein MTR_5g006610 [Medicago truncatula] gi|355512087|gb|AES93710.1| hypothetical protein MTR_5g006610 [Medicago truncatula] gi|388497794|gb|AFK36963.1| unknown [Medicago truncatula] Length = 179 Score = 87.4 bits (215), Expect = 1e-15 Identities = 36/55 (65%), Positives = 45/55 (81%) Frame = -1 Query: 350 EHQPLDAVIHPRKAEATIWLMEEIHRLTSSHHHLGNLWLLDPMHHAFVDPIIPQI 186 E+ PLD +IHPRKAE+TIWLMEEIHR TSSH H+ +LW DPM+H F+D I P++ Sbjct: 121 EYTPLDDIIHPRKAESTIWLMEEIHRQTSSHFHIADLWKKDPMYHGFIDSIFPKL 175 >ref|XP_002883375.1| predicted protein [Arabidopsis lyrata subsp. lyrata] gi|297329215|gb|EFH59634.1| predicted protein [Arabidopsis lyrata subsp. lyrata] Length = 167 Score = 87.0 bits (214), Expect = 1e-15 Identities = 36/55 (65%), Positives = 46/55 (83%) Frame = -1 Query: 350 EHQPLDAVIHPRKAEATIWLMEEIHRLTSSHHHLGNLWLLDPMHHAFVDPIIPQI 186 E Q LD++ HP KAEATIWL+EEIHR+TSSH H+ +LW DPM+H+F+DPI P+I Sbjct: 109 EEQSLDSIFHPSKAEATIWLVEEIHRITSSHLHIASLWGSDPMYHSFIDPIFPKI 163 >dbj|BAJ96476.1| predicted protein [Hordeum vulgare subsp. vulgare] Length = 174 Score = 86.7 bits (213), Expect = 2e-15 Identities = 35/55 (63%), Positives = 44/55 (80%) Frame = -1 Query: 350 EHQPLDAVIHPRKAEATIWLMEEIHRLTSSHHHLGNLWLLDPMHHAFVDPIIPQI 186 EHQPLDA+IHP KA+A IW EEIHRLT+S +LG LW DPM+HA++DP+ P + Sbjct: 117 EHQPLDAIIHPMKAQALIWATEEIHRLTTSSDYLGKLWAKDPMYHAYIDPVFPSL 171