BLASTX nr result

ID: Coptis23_contig00004195 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00004195
         (350 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004134127.1| PREDICTED: protein RDM1-like isoform 1 [Cucu...    93   3e-17
ref|XP_002311634.1| predicted protein [Populus trichocarpa] gi|2...    92   6e-17
ref|XP_003610752.1| hypothetical protein MTR_5g006610 [Medicago ...    87   1e-15
ref|XP_002883375.1| predicted protein [Arabidopsis lyrata subsp....    87   1e-15
dbj|BAJ96476.1| predicted protein [Hordeum vulgare subsp. vulgare]     87   2e-15

>ref|XP_004134127.1| PREDICTED: protein RDM1-like isoform 1 [Cucumis sativus]
           gi|449432682|ref|XP_004134128.1| PREDICTED: protein
           RDM1-like isoform 2 [Cucumis sativus]
           gi|449504162|ref|XP_004162269.1| PREDICTED: protein
           RDM1-like isoform 1 [Cucumis sativus]
           gi|449504166|ref|XP_004162270.1| PREDICTED: protein
           RDM1-like isoform 2 [Cucumis sativus]
          Length = 174

 Score = 92.8 bits (229), Expect = 3e-17
 Identities = 39/55 (70%), Positives = 46/55 (83%)
 Frame = -1

Query: 350 EHQPLDAVIHPRKAEATIWLMEEIHRLTSSHHHLGNLWLLDPMHHAFVDPIIPQI 186
           E++PLD VIHP KAEAT+WL+EEIHR TSSHHH+  LWL DPMH A+VD I PQ+
Sbjct: 120 EYKPLDTVIHPSKAEATVWLVEEIHRRTSSHHHVAKLWLSDPMHQAYVDSIFPQL 174


>ref|XP_002311634.1| predicted protein [Populus trichocarpa] gi|222851454|gb|EEE89001.1|
           predicted protein [Populus trichocarpa]
          Length = 175

 Score = 91.7 bits (226), Expect = 6e-17
 Identities = 38/55 (69%), Positives = 45/55 (81%)
 Frame = -1

Query: 350 EHQPLDAVIHPRKAEATIWLMEEIHRLTSSHHHLGNLWLLDPMHHAFVDPIIPQI 186
           EH PLD +IHP KAEATIWL+EE+HR TSSHHH+  +W  DPMHHAFVD I P++
Sbjct: 121 EHTPLDIMIHPCKAEATIWLVEEVHRRTSSHHHVAKIWQSDPMHHAFVDSIFPKL 175


>ref|XP_003610752.1| hypothetical protein MTR_5g006610 [Medicago truncatula]
           gi|355512087|gb|AES93710.1| hypothetical protein
           MTR_5g006610 [Medicago truncatula]
           gi|388497794|gb|AFK36963.1| unknown [Medicago
           truncatula]
          Length = 179

 Score = 87.4 bits (215), Expect = 1e-15
 Identities = 36/55 (65%), Positives = 45/55 (81%)
 Frame = -1

Query: 350 EHQPLDAVIHPRKAEATIWLMEEIHRLTSSHHHLGNLWLLDPMHHAFVDPIIPQI 186
           E+ PLD +IHPRKAE+TIWLMEEIHR TSSH H+ +LW  DPM+H F+D I P++
Sbjct: 121 EYTPLDDIIHPRKAESTIWLMEEIHRQTSSHFHIADLWKKDPMYHGFIDSIFPKL 175


>ref|XP_002883375.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
           gi|297329215|gb|EFH59634.1| predicted protein
           [Arabidopsis lyrata subsp. lyrata]
          Length = 167

 Score = 87.0 bits (214), Expect = 1e-15
 Identities = 36/55 (65%), Positives = 46/55 (83%)
 Frame = -1

Query: 350 EHQPLDAVIHPRKAEATIWLMEEIHRLTSSHHHLGNLWLLDPMHHAFVDPIIPQI 186
           E Q LD++ HP KAEATIWL+EEIHR+TSSH H+ +LW  DPM+H+F+DPI P+I
Sbjct: 109 EEQSLDSIFHPSKAEATIWLVEEIHRITSSHLHIASLWGSDPMYHSFIDPIFPKI 163


>dbj|BAJ96476.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 174

 Score = 86.7 bits (213), Expect = 2e-15
 Identities = 35/55 (63%), Positives = 44/55 (80%)
 Frame = -1

Query: 350 EHQPLDAVIHPRKAEATIWLMEEIHRLTSSHHHLGNLWLLDPMHHAFVDPIIPQI 186
           EHQPLDA+IHP KA+A IW  EEIHRLT+S  +LG LW  DPM+HA++DP+ P +
Sbjct: 117 EHQPLDAIIHPMKAQALIWATEEIHRLTTSSDYLGKLWAKDPMYHAYIDPVFPSL 171


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