BLASTX nr result

ID: Coptis23_contig00004192 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00004192
         (1098 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002283881.1| PREDICTED: 4,5-DOPA dioxygenase extradiol-li...   397   e-108
ref|XP_002267696.2| PREDICTED: 4,5-DOPA dioxygenase extradiol-li...   395   e-107
emb|CAN83326.1| hypothetical protein VITISV_013290 [Vitis vinifera]   388   e-105
ref|XP_002458858.1| hypothetical protein SORBIDRAFT_03g041600 [S...   385   e-104
tpg|DAA56548.1| TPA: hypothetical protein ZEAMMB73_133109 [Zea m...   384   e-104

>ref|XP_002283881.1| PREDICTED: 4,5-DOPA dioxygenase extradiol-like protein [Vitis
           vinifera] gi|147811122|emb|CAN61349.1| hypothetical
           protein VITISV_021798 [Vitis vinifera]
           gi|297739669|emb|CBI29851.3| unnamed protein product
           [Vitis vinifera]
          Length = 263

 Score =  397 bits (1021), Expect = e-108
 Identities = 189/261 (72%), Positives = 219/261 (83%)
 Frame = -2

Query: 986 MDTFFISHGSPTLSIDDSLPARHFLKSWQDKVCHQKPKAILVISGHWETSEPTVNVVNGP 807
           MDTF+ISHGSPTLSID+SLPARHFLKSW++KV  Q+P +ILVIS HWET EPTVNVV   
Sbjct: 1   MDTFYISHGSPTLSIDESLPARHFLKSWKEKVMGQRPTSILVISAHWETHEPTVNVVP-Q 59

Query: 806 NDTIYDFYGFPKSMYQIKYPAPGAPDLAMRVKELLIASGFKRVNVEKGRGLDHGAWVPTM 627
           NDTIYDFYGFPKSMY++KYPAPGAP+LA RVKELL+AS FK V  +K RGLDHGAWVP M
Sbjct: 60  NDTIYDFYGFPKSMYKLKYPAPGAPELAKRVKELLMASNFKSVKEDKKRGLDHGAWVPLM 119

Query: 626 LMYPNADVPVCQLSIQTNKDGTYHYNMGKALAPLREEGVLIFGSGSATHNLREMGTSNGH 447
           LMYP AD+PVCQLS+QTN+DG+YHYNMG+ALAPLREEGVLI GSGSATHNLR +  ++  
Sbjct: 120 LMYPEADIPVCQLSVQTNRDGSYHYNMGRALAPLREEGVLIIGSGSATHNLRALNPNSES 179

Query: 446 VVSWAEVFDTWLKESLLNGRYEDVNXXXXXXXXXXXXXXXPDHFYPLHVALGAAGDKSKA 267
           VV WA  FDTWLKE+LL+GRYED+N               P+HFYPLHVA+GAAG+ +KA
Sbjct: 180 VVPWAYEFDTWLKEALLDGRYEDINHYEEKAPHAREAHPWPEHFYPLHVAMGAAGENAKA 239

Query: 266 EQIHHSWSLGSISYASYRFTT 204
           + IHHSWSLG++SYASY+FTT
Sbjct: 240 KLIHHSWSLGTLSYASYQFTT 260


>ref|XP_002267696.2| PREDICTED: 4,5-DOPA dioxygenase extradiol-like protein-like [Vitis
           vinifera] gi|296084824|emb|CBI27706.3| unnamed protein
           product [Vitis vinifera]
          Length = 266

 Score =  395 bits (1014), Expect = e-107
 Identities = 194/264 (73%), Positives = 216/264 (81%), Gaps = 3/264 (1%)
 Frame = -2

Query: 986 MDTFFISHGSPTLSIDDSLPARHFLKSWQDKVCHQKPKAILVISGHWETSEPTVNVVNGP 807
           MDTF+ISHGSPTLSID+SLPARHFLKSW++KV  Q P +ILVISGHWET EPTVNVV   
Sbjct: 1   MDTFYISHGSPTLSIDESLPARHFLKSWREKVMGQPPTSILVISGHWETHEPTVNVVPR- 59

Query: 806 NDTIYDFYGFPKSMYQIKYPAPGAPDLAMRVKELLIASGFKRVNVEKGRGLDHGAWVPTM 627
           NDTIYDFYGFPK MY+ KYPAPGAP+LA RVKELL+AS FK VN +K RGLDHGAWVP M
Sbjct: 60  NDTIYDFYGFPKPMYEFKYPAPGAPELAKRVKELLMASDFKCVNEDKERGLDHGAWVPLM 119

Query: 626 LMYPNADVPVCQLSIQTNKDGTYHYNMGKALAPLREEGVLIFGSGSATHNLREM---GTS 456
           LMYP AD+PVCQLS+QTN+DG+YHYNMGKALAPLREEGVLIFGSGSATHNLR +     S
Sbjct: 120 LMYPEADIPVCQLSVQTNRDGSYHYNMGKALAPLREEGVLIFGSGSATHNLRTINRNSDS 179

Query: 455 NGHVVSWAEVFDTWLKESLLNGRYEDVNXXXXXXXXXXXXXXXPDHFYPLHVALGAAGDK 276
              VV WA  FDTWLKE+LL+GRYEDVN               PDHFYPLHVA+GAAG  
Sbjct: 180 KAAVVPWAYEFDTWLKEALLDGRYEDVNCYEEKAPHAREAHPWPDHFYPLHVAMGAAGKD 239

Query: 275 SKAEQIHHSWSLGSISYASYRFTT 204
           +KA+ IHHSWS G++SYASY+FTT
Sbjct: 240 AKAKLIHHSWSFGTLSYASYQFTT 263


>emb|CAN83326.1| hypothetical protein VITISV_013290 [Vitis vinifera]
          Length = 266

 Score =  388 bits (997), Expect = e-105
 Identities = 191/264 (72%), Positives = 214/264 (81%), Gaps = 3/264 (1%)
 Frame = -2

Query: 986 MDTFFISHGSPTLSIDDSLPARHFLKSWQDKVCHQKPKAILVISGHWETSEPTVNVVNGP 807
           MDTF+ISHGSPTLSID+SLPARHFLKSW++KV  Q P +ILVISGHWET EPTVNVV   
Sbjct: 1   MDTFYISHGSPTLSIDESLPARHFLKSWREKVMGQPPTSILVISGHWETHEPTVNVVPR- 59

Query: 806 NDTIYDFYGFPKSMYQIKYPAPGAPDLAMRVKELLIASGFKRVNVEKGRGLDHGAWVPTM 627
           NDTIYDFYGFPK MY+ KYPAPGAP+LA RVK LL AS FK VN +K RGLDHGAWVP M
Sbjct: 60  NDTIYDFYGFPKPMYEXKYPAPGAPELAKRVKXLLXASDFKCVNEDKERGLDHGAWVPLM 119

Query: 626 LMYPNADVPVCQLSIQTNKDGTYHYNMGKALAPLREEGVLIFGSGSATHNLREMGTSN-- 453
           LMYP AD+PVCQLS+QTN+DG+YHYNMGKALAPLREEGVLIFGSGSATHNLR +  ++  
Sbjct: 120 LMYPEADIPVCQLSVQTNRDGSYHYNMGKALAPLREEGVLIFGSGSATHNLRTINRNSDX 179

Query: 452 -GHVVSWAEVFDTWLKESLLNGRYEDVNXXXXXXXXXXXXXXXPDHFYPLHVALGAAGDK 276
              VV WA  FDTWLKE+LL+GRYEDVN               PDHFYPLHVA+GAAG  
Sbjct: 180 KAAVVPWAYEFDTWLKEALLDGRYEDVNCYEEKAPHAREAHPWPDHFYPLHVAMGAAGKD 239

Query: 275 SKAEQIHHSWSLGSISYASYRFTT 204
           +KA+ IHHSWS G++SYA Y+FTT
Sbjct: 240 AKAKLIHHSWSFGTLSYAFYQFTT 263


>ref|XP_002458858.1| hypothetical protein SORBIDRAFT_03g041600 [Sorghum bicolor]
           gi|241930833|gb|EES03978.1| hypothetical protein
           SORBIDRAFT_03g041600 [Sorghum bicolor]
          Length = 321

 Score =  385 bits (988), Expect = e-104
 Identities = 184/264 (69%), Positives = 210/264 (79%), Gaps = 2/264 (0%)
 Frame = -2

Query: 986 MDTFFISHGSPTLSIDDSLPARHFLKSWQD-KVC-HQKPKAILVISGHWETSEPTVNVVN 813
           MDTFF+SHGSPTLSIDD +PARHF KSW   KV   Q P+AILV+SGHWET+ P VNV+ 
Sbjct: 57  MDTFFLSHGSPTLSIDDKIPARHFFKSWVPAKVAGDQAPRAILVVSGHWETATPAVNVIR 116

Query: 812 GPNDTIYDFYGFPKSMYQIKYPAPGAPDLAMRVKELLIASGFKRVNVEKGRGLDHGAWVP 633
           G NDTIYDFYGFPK MYQ+KYPAPGAPDLA+R KELL  +GF  V  +  RGLDHGAWVP
Sbjct: 117 GSNDTIYDFYGFPKPMYQLKYPAPGAPDLALRTKELLEQAGFGPVKEDHSRGLDHGAWVP 176

Query: 632 TMLMYPNADVPVCQLSIQTNKDGTYHYNMGKALAPLREEGVLIFGSGSATHNLREMGTSN 453
            MLMYP+A++PVCQLS+Q+++DGTYHYN+GKALAPLREEG+LI GSGSATHNLR+MG  +
Sbjct: 177 LMLMYPDANIPVCQLSVQSDRDGTYHYNLGKALAPLREEGILIVGSGSATHNLRKMGPFD 236

Query: 452 GHVVSWAEVFDTWLKESLLNGRYEDVNXXXXXXXXXXXXXXXPDHFYPLHVALGAAGDKS 273
             V  W   FDTWLK+SLL GRYEDVN               PDHFYPLHVALGAAGD +
Sbjct: 237 APVPRWVAEFDTWLKDSLLGGRYEDVNRYEEKAPHGRAAHPWPDHFYPLHVALGAAGDAA 296

Query: 272 KAEQIHHSWSLGSISYASYRFTTN 201
           KAEQIHH W+  ++SYASYRFTTN
Sbjct: 297 KAEQIHHCWTNATLSYASYRFTTN 320


>tpg|DAA56548.1| TPA: hypothetical protein ZEAMMB73_133109 [Zea mays]
          Length = 319

 Score =  384 bits (987), Expect = e-104
 Identities = 186/264 (70%), Positives = 209/264 (79%), Gaps = 2/264 (0%)
 Frame = -2

Query: 986 MDTFFISHGSPTLSIDDSLPARHFLKSWQD-KVC-HQKPKAILVISGHWETSEPTVNVVN 813
           MDTFF+SHGSPTLSIDDS+PARHF KSW   KV   Q P+AILV+SGHWET+ P VNV+ 
Sbjct: 55  MDTFFLSHGSPTLSIDDSIPARHFFKSWVPAKVAGDQPPRAILVVSGHWETATPAVNVIR 114

Query: 812 GPNDTIYDFYGFPKSMYQIKYPAPGAPDLAMRVKELLIASGFKRVNVEKGRGLDHGAWVP 633
           G NDTIYDFYGFPK MYQ+KYPAPGAPDLA+R  ELL  +GF  V  +  RGLDHGAWVP
Sbjct: 115 GSNDTIYDFYGFPKPMYQLKYPAPGAPDLALRTVELLEQAGFGPVKQDHSRGLDHGAWVP 174

Query: 632 TMLMYPNADVPVCQLSIQTNKDGTYHYNMGKALAPLREEGVLIFGSGSATHNLREMGTSN 453
            MLMYP+A +PVCQLS+QT++DGTYHYN+GKALAPLREEG LI GSGSATHNLR++  S+
Sbjct: 175 LMLMYPDASIPVCQLSVQTDRDGTYHYNLGKALAPLREEGTLIIGSGSATHNLRKISPSD 234

Query: 452 GHVVSWAEVFDTWLKESLLNGRYEDVNXXXXXXXXXXXXXXXPDHFYPLHVALGAAGDKS 273
             V  WA  FDTWLK+SLLNGRYEDV                PDHFYPLHVALGAAGD +
Sbjct: 235 APVPQWAAEFDTWLKDSLLNGRYEDVKRYEEKAPHARVAHPWPDHFYPLHVALGAAGDGA 294

Query: 272 KAEQIHHSWSLGSISYASYRFTTN 201
           KAEQIH  WS G++SYASYRFTTN
Sbjct: 295 KAEQIHQCWSNGTLSYASYRFTTN 318


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