BLASTX nr result
ID: Coptis23_contig00004190
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Coptis23_contig00004190
(3948 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_004148557.1| PREDICTED: zinc finger CCCH domain-containin... 870 0.0
ref|XP_004164844.1| PREDICTED: LOW QUALITY PROTEIN: zinc finger ... 868 0.0
ref|XP_003604006.1| Flavonol synthase/flavanone 3-hydroxylase [M... 837 0.0
emb|CBI37995.3| unnamed protein product [Vitis vinifera] 815 0.0
ref|NP_179241.4| DNA binding / nucleic acid binding / protein bi... 753 0.0
>ref|XP_004148557.1| PREDICTED: zinc finger CCCH domain-containing protein 19-like
[Cucumis sativus]
Length = 1470
Score = 870 bits (2249), Expect = 0.0
Identities = 442/795 (55%), Positives = 552/795 (69%), Gaps = 22/795 (2%)
Frame = -2
Query: 3542 SDRKRKRGRPAKVQGKAPLKTTEEEDVCFICFDGGNLVLCDRRACPKAYHPACVNRDEAF 3363
S KRKRG+ +K + + EEDVCFICFDGG+LVLCDRR CPKAYHPAC+NRDEAF
Sbjct: 166 SGSKRKRGKNSKAPARVASRKKVEEDVCFICFDGGDLVLCDRRGCPKAYHPACINRDEAF 225
Query: 3362 FRSKGRWNCGWHICSNCEKGAHYMCYTCTYSLCKGCIKETEYFCVRGNKGFCETCMRTVM 3183
FR+KGRWNCGWH+CSNCEK AHYMCYTCT+SLCKGCIK CVRGNKGFCETCMR V
Sbjct: 226 FRAKGRWNCGWHLCSNCEKTAHYMCYTCTFSLCKGCIKNAVILCVRGNKGFCETCMRFVT 285
Query: 3182 LIEKNEQGNKEMAQVDFDDKNSWEYLFKEYYMDLKRKLSLTLDVLSQARNPFKGSSTSVR 3003
IEKNEQGNKE Q+DF+DKNSWEYLFKEY+ DLK LSLT D L A+NP+KGS T
Sbjct: 286 SIEKNEQGNKEKGQIDFNDKNSWEYLFKEYWTDLKGSLSLTFDELVHAKNPWKGSETLTS 345
Query: 3002 KAESSEDVYXXXXXXXXXXXXAKHHEVXXXXXXXXXXXXXXXKDE-DLPSVTHVVGVGTS 2826
+ +S ++ +++ E E PS+ G S
Sbjct: 346 RPDSPGELCDGNVDGGSDLDVSENEESGSSKKRKAKKRSRSQAKEMSSPSMPATASQGLS 405
Query: 2825 LTNDADWASKELLEFVAHMKNGDKSVLSQFDVQALLLEYIKQNNLRDPRRKSQIVCDSRL 2646
++ +W SKELLEFV HMKNGD++VLSQFDVQALLLEYIK+N LRDPRRKSQI+CDSRL
Sbjct: 406 TDDNVEWGSKELLEFVMHMKNGDRTVLSQFDVQALLLEYIKRNKLRDPRRKSQIICDSRL 465
Query: 2645 VNLFGKARVGHFEMLKLLESHFLIKEDTHTDDIQGTGGD-EASQLDGDGTSGALTXXXXX 2469
+LFGK RVGHFEMLKLLESHFLIKED +D+ + + E+SQL+ DGT G+
Sbjct: 466 ESLFGKPRVGHFEMLKLLESHFLIKEDAQINDLHVSVAETESSQLEADGTDGSGKIKKEK 525
Query: 2468 XXXXXXXXXXXGPQANLDDYAAIDVHNIKLLYLRRNLMEDLLEDGDKFQDNVVGTFVRIR 2289
Q+NLDDYAAID+HNI L+YL+RNL+E L+ED + F D VVG+FVRIR
Sbjct: 526 KRRTRKKDERGL-QSNLDDYAAIDIHNINLIYLKRNLVEYLIEDEESFHDKVVGSFVRIR 584
Query: 2288 ISGAGHKQDMYRLVQVVGTRKAAAPYKTGKRLADVVLEILNLNKSEVISIDTISNQDFSE 2109
ISG+ KQD+YRLVQVVGT KA+ PYK GKR+ D++LEILNLNK+EV+SID ISNQ+F+E
Sbjct: 585 ISGSAQKQDLYRLVQVVGTSKASEPYKVGKRMTDILLEILNLNKTEVVSIDIISNQEFTE 644
Query: 2108 GECKRLRQSIKCGLISRMTVGEVQDKAMALQAVRVNDWLETEKLRISHLRDRASEQGRRK 1929
ECKRLRQS+KCG+I+R+TVG++Q++AM+LQ RV DW+ETE +R+SHLRDRASE+GRRK
Sbjct: 645 DECKRLRQSMKCGIINRLTVGDLQERAMSLQDARVKDWMETEIVRLSHLRDRASEKGRRK 704
Query: 1928 DLRECVEKLQLLNRPEERFRRLEQVPVVHSDPKMDPGYXXXXXXXXDNSPQDKYMMSRDA 1749
+LRECVEKLQLL PEER RR+E++P +H+DP MDP + D+ ++ Y +SR
Sbjct: 705 ELRECVEKLQLLKTPEERQRRIEEIPEIHADPNMDPSHESEDEDEADDKRRETYTLSRST 764
Query: 1748 GFSRKGRDPISPGKGSPALVDTRGAARKYAASEPNI--NSSAVGVWDGVYSPNGAGDPTS 1575
F R+ R+P+SPGKG L D+ R ++ + ++ N S G + G+G+ +
Sbjct: 765 SFGRRTREPVSPGKGGSHLNDSWSGTRNFSNTNRDMSRNLSGKGFANQGDDAIGSGEIIN 824
Query: 1574 ------------------DAQHMASATGLGISAWSSQAVGRSGPSSGNPKEMAAPLSTGL 1449
D Q S+ +A S A S S NP ++ +T
Sbjct: 825 ETSWGHGRERDVKKTSKWDKQVSPSSEITARNALSGAASESSAAHSVNPAASSSVGTTQN 884
Query: 1448 SSTISETEKLWCYQDPSGKTQGPFSMVQLRKWSTTGHFPVDLKIWKTSETQEDAILLNDA 1269
++T++E+EK+W YQDPSGK QGPFSMVQLRKWS TG+FP DL+IW+ S+ QED++LL D
Sbjct: 885 AATVNESEKIWHYQDPSGKVQGPFSMVQLRKWSNTGYFPTDLRIWRISDQQEDSLLLTDV 944
Query: 1268 LAGKFSKPLPHRNNS 1224
LAGK SK P +NS
Sbjct: 945 LAGKISKDTPLTSNS 959
>ref|XP_004164844.1| PREDICTED: LOW QUALITY PROTEIN: zinc finger CCCH domain-containing
protein 19-like [Cucumis sativus]
Length = 1475
Score = 868 bits (2244), Expect = 0.0
Identities = 442/795 (55%), Positives = 553/795 (69%), Gaps = 22/795 (2%)
Frame = -2
Query: 3542 SDRKRKRGRPAKVQGKAPLKTTEEEDVCFICFDGGNLVLCDRRACPKAYHPACVNRDEAF 3363
S KRKRG+ +K + + EEDVCFICFDGG+LVLCDRR CPKAYHPAC+NRDEAF
Sbjct: 166 SGSKRKRGKNSKAPARVASRKKVEEDVCFICFDGGDLVLCDRRGCPKAYHPACINRDEAF 225
Query: 3362 FRSKGRWNCGWHICSNCEKGAHYMCYTCTYSLCKGCIKETEYFCVRGNKGFCETCMRTVM 3183
FR+KGRWNCGWH+CSNCEK AHYMCYTCT+SLCKGCIK CVRGNKGFCETCMR V
Sbjct: 226 FRAKGRWNCGWHLCSNCEKTAHYMCYTCTFSLCKGCIKNAVILCVRGNKGFCETCMRFVT 285
Query: 3182 LIEKNEQGNKEMAQVDFDDKNSWEYLFKEYYMDLKRKLSLTLDVLSQARNPFKGSSTSVR 3003
IEKNEQGNKE Q+DF+DKNSWEYLFKEY+ DLK LSLT D L A+NP+KGS T
Sbjct: 286 SIEKNEQGNKEKGQIDFNDKNSWEYLFKEYWTDLKGSLSLTFDELVHAKNPWKGSETLTS 345
Query: 3002 KAESSEDVYXXXXXXXXXXXXAKHHEVXXXXXXXXXXXXXXXKDE-DLPSVTHVVGVGTS 2826
+ +S ++ +++ E E PS+ G S
Sbjct: 346 RPDSPGELCDGNVDGGSDLDVSENEESGSSKKRKAKKRSRSQAKEMSSPSMPATASQGLS 405
Query: 2825 LTNDADWASKELLEFVAHMKNGDKSVLSQFDVQALLLEYIKQNNLRDPRRKSQIVCDSRL 2646
++ +W SKELLEFV HMKNG+++VLSQFDVQALLLEYIK+N LRDPRRKSQI+CDSRL
Sbjct: 406 TDDNVEWGSKELLEFVMHMKNGNRTVLSQFDVQALLLEYIKRNKLRDPRRKSQIICDSRL 465
Query: 2645 VNLFGKARVGHFEMLKLLESHFLIKEDTHTDDIQGTGGD-EASQLDGDGTSGALTXXXXX 2469
+LFGK RVGHFEMLKLLESHFLIKED +D+ + + E+SQL+ DGT G+
Sbjct: 466 ESLFGKPRVGHFEMLKLLESHFLIKEDAQINDLHVSVAETESSQLEADGTDGSGKIKKEK 525
Query: 2468 XXXXXXXXXXXGPQANLDDYAAIDVHNIKLLYLRRNLMEDLLEDGDKFQDNVVGTFVRIR 2289
Q+NLDDYAAID+HNI L+YL+RNL+E L+ED + F D VVG+FVRIR
Sbjct: 526 KRRTRKKXERGL-QSNLDDYAAIDIHNINLIYLKRNLVEYLIEDEESFHDKVVGSFVRIR 584
Query: 2288 ISGAGHKQDMYRLVQVVGTRKAAAPYKTGKRLADVVLEILNLNKSEVISIDTISNQDFSE 2109
ISG+ KQD+YRLVQVVGT KA+ PYK GKR+ D++LEILNLNK+EV+SID ISNQ+F+E
Sbjct: 585 ISGSAQKQDLYRLVQVVGTSKASEPYKVGKRMTDILLEILNLNKTEVVSIDIISNQEFTE 644
Query: 2108 GECKRLRQSIKCGLISRMTVGEVQDKAMALQAVRVNDWLETEKLRISHLRDRASEQGRRK 1929
ECKRLRQS+KCG+I+R+TVG++Q++AM+LQ RV DW+ETE +R+SHLRDRASE+GRRK
Sbjct: 645 DECKRLRQSMKCGIINRLTVGDLQERAMSLQDARVKDWMETEIVRLSHLRDRASEKGRRK 704
Query: 1928 DLRECVEKLQLLNRPEERFRRLEQVPVVHSDPKMDPGYXXXXXXXXDNSPQDKYMMSRDA 1749
+LRECVEKLQLL PEER RR+E++P +H+DP MDP + D+ ++ Y +SR
Sbjct: 705 ELRECVEKLQLLKTPEERQRRIEEIPEIHADPNMDPSHESEDEDEADDKRRETYTLSRST 764
Query: 1748 GFSRKGRDPISPGKGSPALVDTRGAARKYAASEPNI--NSSAVGVWDGVYSPNGAGDPTS 1575
F R+ R+P+SPGKG L D+ R ++ + ++ N S G + G+G+ +
Sbjct: 765 SFGRRTREPVSPGKGGSHLNDSWSGTRNFSNTNRDMSRNLSGKGFANQGDDAIGSGEIIN 824
Query: 1574 ------------------DAQHMASATGLGISAWSSQAVGRSGPSSGNPKEMAAPLSTGL 1449
D Q S+ +A S A S S NP ++ +T
Sbjct: 825 ETSWGHGRERDVKKTSKWDKQVSPSSEITARNALSGAASESSAAHSVNPAASSSVGTTQN 884
Query: 1448 SSTISETEKLWCYQDPSGKTQGPFSMVQLRKWSTTGHFPVDLKIWKTSETQEDAILLNDA 1269
++T++E+EK+W YQDPSGK QGPFSMVQLRKWS TG+FP DL+IW+ S+ QED++LL D
Sbjct: 885 AATVNESEKIWHYQDPSGKVQGPFSMVQLRKWSNTGYFPTDLRIWRISDQQEDSLLLTDV 944
Query: 1268 LAGKFSKPLPHRNNS 1224
LAGK SK P +NS
Sbjct: 945 LAGKISKDTPLTSNS 959
>ref|XP_003604006.1| Flavonol synthase/flavanone 3-hydroxylase [Medicago truncatula]
gi|355493054|gb|AES74257.1| Flavonol synthase/flavanone
3-hydroxylase [Medicago truncatula]
Length = 1942
Score = 837 bits (2163), Expect = 0.0
Identities = 524/1196 (43%), Positives = 661/1196 (55%), Gaps = 107/1196 (8%)
Frame = -2
Query: 3944 EKDNASPMEGEKDNA--SPMEGEKDDASLMTDDK----DGTSPMLKNKDDSSPMVEDKDD 3783
E DN ++ DN+ +P+ GE D+ +D+ +G P +N+DD E +DD
Sbjct: 570 EPDNVEEVQVRVDNSDEAPLIGEDDEEKKEEEDEKEIQEGEHPQ-QNEDDEEQEQEQEDD 628
Query: 3782 ---ASPVVDNQKDTSPGIDKEASPIIGNEDDSHVVDDENVSHMVNDEGDVSPMAAEEAAL 3612
A P D DKEA D+E V + +E S A +
Sbjct: 629 EEEADPDGDGDVSLPDVEDKEA-------------DEETVVEVAEEEPSPSASAGK---- 671
Query: 3611 GSXXXXXXXXXXXXXXXXXXEGKSDRKRKRGRPAKVQGKAPLKTTEEEDVCFICFDGGNL 3432
RK G+ +K G+ P K EEDVCFICFDGG+L
Sbjct: 672 -------------------------RKSGNGKNSKSSGRVPSKKKMEEDVCFICFDGGDL 706
Query: 3431 VLCDRRACPKAYHPACVNRDEAFFRSKGRWNCGWHICSNCEKGAHYMCYTCTYSLCKGCI 3252
VLCDRR CPKAYHP+CVNRDEAFF++KG+WNCGWH+CSNCEK AHY+CYTCT+SLCKGCI
Sbjct: 707 VLCDRRGCPKAYHPSCVNRDEAFFQTKGKWNCGWHLCSNCEKNAHYLCYTCTFSLCKGCI 766
Query: 3251 KETEYFCVRGNKGFCETCMRTVMLIEKNEQGNKEMAQVDFDDKNSWEYLFKEYYMDLKRK 3072
K+ CVRGNKGFCETCMRTVMLIE+NE+GN MAQVDF+DKNSWEYLFK+YY+DLK K
Sbjct: 767 KDAVMLCVRGNKGFCETCMRTVMLIEQNEEGN-NMAQVDFNDKNSWEYLFKDYYVDLKGK 825
Query: 3071 LSLTLDVLSQARNPFKGSSTSVRKAESSEDVYXXXXXXXXXXXXAKHHEVXXXXXXXXXX 2892
LSLT D L+QA+NP+KGS K ES ++++ +
Sbjct: 826 LSLTFDELAQAKNPWKGSGKLPSKEESPDELFDATNDRGSDSDSPYENVDLSRSKKRKPK 885
Query: 2891 XXXXXKDEDLPSVTHVVGVGTSLTNDADWASKELLEFVAHMKNGDKSVLSQFDVQALLLE 2712
+ ++ S + +S ++WASKELLEFV HM+NGDKS+L QFDV ALLLE
Sbjct: 886 KRAKSRSKEGKSYS-----ASSTEESSEWASKELLEFVMHMRNGDKSMLPQFDVHALLLE 940
Query: 2711 YIKQNNLRDPRRKSQIVCDSRLVNLFGKARVGHFEMLKLLESHFLIKEDTHTDDIQGTGG 2532
YIK N LRDPRRKSQIVCD+RL NLFGK RVGHFEMLKLLESHFL+KED+ +D QG+
Sbjct: 941 YIKINKLRDPRRKSQIVCDARLQNLFGKPRVGHFEMLKLLESHFLLKEDSQAEDHQGSVV 1000
Query: 2531 D-EASQLDGDGTSGA-LTXXXXXXXXXXXXXXXXGPQANLDDYAAIDVHNIKLLYLRRNL 2358
D E S L+GDG + G Q+N+D+YAAID HNI L+YLRRNL
Sbjct: 1001 DTEVSHLEGDGDDDTYIKVGKDKKRKSRKKGDERGLQSNIDEYAAIDNHNINLIYLRRNL 1060
Query: 2357 MEDLLEDGDKFQDNVVGTFVRIRISGAGHKQDMYRLVQVVGTRKAAAPYKTGKRLADVVL 2178
+EDLLED D+F D+VVG+FVRIRISG+G KQD+YRLVQV GT K A PYK GK++ D++L
Sbjct: 1061 VEDLLEDTDQFHDSVVGSFVRIRISGSGQKQDLYRLVQVAGTCKTAEPYKVGKKMTDILL 1120
Query: 2177 EILNLNKSEVISIDTISNQDFSE------------------------------------- 2109
EILNLNK+E++S+D ISNQ+F+E
Sbjct: 1121 EILNLNKTEIVSMDIISNQEFTEWLMAEGQESAMLQLLKIESEERKRKVFRDWDKGLVGR 1180
Query: 2108 --GECKRLRQSIKCGLISRMTVGEVQDKAMALQAVRVNDWLETEKLRISHLRDRASEQGR 1935
ECKRLRQSIKCGLI+RMTVG++QDKA+ LQAVRV DWLETE +R+SHLRDRASE GR
Sbjct: 1181 DQDECKRLRQSIKCGLINRMTVGDIQDKALTLQAVRVKDWLETEIVRLSHLRDRASENGR 1240
Query: 1934 RKDL-----RECVEKLQLLNRPEERFRRLEQVPVVHSDPKMDPGYXXXXXXXXDNSPQDK 1770
RK+ ++CVEKLQLL PEER RRLE++P +H DPKMDP Y ++ Q+
Sbjct: 1241 RKEYPFFIRKKCVEKLQLLKTPEERQRRLEEIPEIHVDPKMDPSYESDEGDEMEDKRQEN 1300
Query: 1769 YMMSR-DAGFSRKGRDPISPGKGSPALVDTRGAARKYAA--SEPNINSSAVGVWDGVYSP 1599
+M R + F RKGR+ SP GS + D+ R Y+ E + N S G
Sbjct: 1301 FMRPRGSSAFGRKGREIASPRSGSIS-SDSWSGTRNYSPMNQELSRNLSNKGFSVKGDDV 1359
Query: 1598 NGAGDPTSDAQ-HMASATGLGIS-AWSSQAVGRSGPSSGN----------------PKEM 1473
+ A + +D+Q H +S +W Q + S +G +
Sbjct: 1360 SNATELLNDSQFHQGRDKESQLSNSWDRQKLLSSSLENGGKSTRPLVASESFSNTVSEAA 1419
Query: 1472 AAPLSTGLSS---TISETEKLWCYQDPSGKTQGPFSMVQLRKWSTTGHFPVDLKIWKTSE 1302
AP S GL++ I+ETEK+W YQDPSGK QGPFSMVQL KW+ TG+FP DL+IWKTSE
Sbjct: 1420 TAPSSGGLAAPAVKINETEKMWHYQDPSGKVQGPFSMVQLSKWNNTGYFPADLRIWKTSE 1479
Query: 1301 TQEDAILLNDALAGKFS-KPLPHRNNSFSTPEKVVALSNSSREVNLGGSWKGTTSMTWTD 1125
Q+++ILL D LAGKFS +P + S S G + K +
Sbjct: 1480 RQDESILLRDVLAGKFSIEPSAVDTTPPKAQNHSSSFSRMSPLAAQGLASKTSPLAVEVP 1539
Query: 1124 KNQMNLNWKDASSVANGNTKLTN--SEAWGSGSAGWVAQT----TDTRXXXXXXXXXXXX 963
KN N W +SV N T L + + GS G + T +
Sbjct: 1540 KNPGN-GWGSGASVKNEPTSLPSPTPQTASVGSMGHAFENKWSPTPVQMAGSVLGNSFPN 1598
Query: 962 SLRGNMVSSGRVAHNPHPSFTG---------------------HPHRPTSHQWGQSGGRW 846
SL G S VA N HP T H R + WGQS
Sbjct: 1599 SLGGFQTS---VAVNSHPGITADTTQVHLQATAANMQNQAASIHNSRAEAQGWGQSVVPK 1655
Query: 845 SHGQNQENTWNSNRSLSNSGHGYDSRANTMGPSVQSSGENWRNPQVNSGAPSTATG 678
Q T + ++NSG T+ P+ Q+S W + + S +TG
Sbjct: 1656 PESQAWGGTPSQRVEVNNSG--------TL-PAQQASHGLWGDASSVQNSASFSTG 1702
>emb|CBI37995.3| unnamed protein product [Vitis vinifera]
Length = 868
Score = 815 bits (2105), Expect = 0.0
Identities = 463/904 (51%), Positives = 562/904 (62%), Gaps = 61/904 (6%)
Frame = -2
Query: 3800 VEDKDDASPVVDNQKDTSPGIDKEASPIIGNE------DDSHVVDDENVSHMVN------ 3657
+E++DDA + D K SP ++ IG+E D VV + + S +V
Sbjct: 1 MEEEDDA--LNDGYKPPSP---RQGDSAIGDEVLPQSIDQCDVVSELDDSQLVGAASPAA 55
Query: 3656 -----DEGDVSPMAAEEAALGSXXXXXXXXXXXXXXXXXXEGKSDRKRKRGRPAKVQGKA 3492
+E DV +A EEA + G +RKRGR +V +A
Sbjct: 56 VAEPEEEEDVEAIAGEEAEAEAEAEAEAEAGVEVAEGGRGGGG---RRKRGRNPRVPARA 112
Query: 3491 PLKTTEEEDVCFICFDGGNLVLCDRRACPKAYHPACVNRDEAFFRSKGRWNCGWHICSNC 3312
PLK + EEDVCFICFDGG+LVLCDRR CPKAYH CVNRDE FFR+KG+WNCGWH C+ C
Sbjct: 113 PLKKSFEEDVCFICFDGGDLVLCDRRGCPKAYHTTCVNRDEEFFRAKGKWNCGWHQCTAC 172
Query: 3311 EKGAHYMCYTCTYSLCKGCIKETEYFCVRGNKGFCETCMRTVMLIEKNEQGNKEMAQVDF 3132
EK ++YMC TC +SLCK CIK++ FCVR NKGFCE CM+ +MLIEKNEQGNKEM QVDF
Sbjct: 173 EKNSYYMCLTCPFSLCKNCIKDSVIFCVRENKGFCEACMKIIMLIEKNEQGNKEMDQVDF 232
Query: 3131 DDKNSWEYLFKEYYMDLKRKLSLTLDVLSQARNPFKGSSTSVRKAESSE---DVYXXXXX 2961
DDK+SWE+LFK+Y++DLK +LSLT D L+QA+NP+KGS K E+ + DVY
Sbjct: 233 DDKSSWEFLFKDYWIDLKGRLSLTSDELAQAKNPWKGSDAPAGKQEAPDEPNDVYNDGGP 292
Query: 2960 XXXXXXXAKHHEVXXXXXXXXXXXXXXXKDEDLPSVTHVVGV-GTSLTNDADWASKELLE 2784
K+ D PSV +G GTS + +WASKELLE
Sbjct: 293 GSDSSSGNVEAR-KPKRRKAKKRLKSLNKERDSPSVATAIGAEGTSTPANTEWASKELLE 351
Query: 2783 FVAHMKNGDKSVLSQFDVQALLLEYIKQNNLRDPRRKSQIVCDSRLVNLFGKARVGHFEM 2604
FV HMKNGDKSV SQFDVQALLLEYIK+N LRDPRRKSQI+CDSRL LFGK RVGHFEM
Sbjct: 352 FVMHMKNGDKSVTSQFDVQALLLEYIKRNKLRDPRRKSQIICDSRLEYLFGKPRVGHFEM 411
Query: 2603 LKLLESHFLIKEDTHTDDIQGTGGD-EASQLDGDGTSGALTXXXXXXXXXXXXXXXXG-P 2430
LKLLESHFL KED+ TDD+QG+ D EASQL+ DG + L
Sbjct: 412 LKLLESHFLNKEDSQTDDLQGSVVDSEASQLEVDGNTDTLMKVGKDRRRKARKKGDERGS 471
Query: 2429 QANLDDYAAIDVHNIKLLYLRRNLMEDLLEDGDKFQDNVVGTFVRIRISGAGHKQDMYRL 2250
Q+NLDDYAAID+HNI L+YLRRNLMEDL+ED +K D VVG FVRIRISG+G KQD+YRL
Sbjct: 472 QSNLDDYAAIDIHNISLIYLRRNLMEDLIEDTEKLHDKVVGAFVRIRISGSGQKQDVYRL 531
Query: 2249 VQVVGTRKAAAPYKTGKRLADVVLEILNLNKSEVISIDTISNQDFSEGECKRLRQSIKCG 2070
VQVVGT KAA PYK GKR +V+LEILNL+K+E+ISID ISNQ+F+E EC RLRQSIKCG
Sbjct: 532 VQVVGTSKAADPYKVGKRTTEVMLEILNLSKTEIISIDIISNQEFTEDECMRLRQSIKCG 591
Query: 2069 LISRMTVGEVQDKAMALQAVRVNDWLETEKLRISHLRDRASEQGRRKD------------ 1926
LI+ +TVG + +KA+ALQAVRV DWLETE +R+SHLRDRASE+GRRK+
Sbjct: 592 LITPLTVGGILEKALALQAVRVKDWLETEIVRLSHLRDRASEKGRRKEYPFFVQLMHSSI 651
Query: 1925 ---------------------LRECVEKLQLLNRPEERFRRLEQVPVVHSDPKMDPGYXX 1809
ECVEKLQ L EER RRLE++P VH+DP MDP Y
Sbjct: 652 IILNMQVASCYHMSYFLKTLPFWECVEKLQRLKTAEERQRRLEEIPEVHADPNMDPSYES 711
Query: 1808 XXXXXXDNSP-QDKYMMSRDAGFSRKGRDPISPGKGSPALVDTRGAARKYAASEPNINSS 1632
+ Q+ ++ RD GFSRK +P S KG + Y+ S P NSS
Sbjct: 712 EEDESETDDKRQENHLRPRDTGFSRKRMEPSSSRKGD--------SGSNYSWSTPTKNSS 763
Query: 1631 AVGVWDGVYSPNGAGDPTSDAQHMASATGLGISAWSSQAVGRSGPSSGNPKEMAA-PLST 1455
+ +S VGRS SG E ++ P T
Sbjct: 764 RNWEFSRTHS-----------------------------VGRSESFSGVALESSSGPPLT 794
Query: 1454 GLSST---ISETEKLWCYQDPSGKTQGPFSMVQLRKWSTTGHFPVDLKIWKTSETQEDAI 1284
G+ T +SET+K+W YQDPSG+ QGPFS+VQLRKWS +G FP DL+IW+T+E Q+D+
Sbjct: 795 GVEPTAAKLSETDKMWHYQDPSGRVQGPFSLVQLRKWSNSGFFPKDLRIWRTTEKQDDSA 854
Query: 1283 LLND 1272
LL D
Sbjct: 855 LLTD 858
>ref|NP_179241.4| DNA binding / nucleic acid binding / protein binding / zinc ion
binding protein [Arabidopsis thaliana]
gi|391358194|sp|Q9SIV5.3|C3H19_ARATH RecName: Full=Zinc
finger CCCH domain-containing protein 19; Short=AtC3H19;
AltName: Full=Protein Needed for RDR2-independent DNA
methylation gi|330251407|gb|AEC06501.1| DNA binding /
nucleic acid binding / protein binding / zinc ion binding
protein [Arabidopsis thaliana]
Length = 1773
Score = 753 bits (1943), Expect = 0.0
Identities = 473/1164 (40%), Positives = 632/1164 (54%), Gaps = 94/1164 (8%)
Frame = -2
Query: 3881 KDDASLMTDDKDGTSPMLKNKDDSSPMV-----EDKDDASPVVDNQKDTSPG-IDKEASP 3720
KD+ D+ + ++N DSS ED +D V + QK+T G +D+
Sbjct: 446 KDEDQEKDDNMTDLAEDVENHRDSSVADIEEGREDHEDMG-VTETQKETVLGKVDRTKIA 504
Query: 3719 IIGNEDDSHVVDDE--------NVSHMVNDEGDVSPMAAEEAALGSXXXXXXXXXXXXXX 3564
+ E D+ + D++ +V+ V GD S EE
Sbjct: 505 EVSEETDTRIEDEDQEKDDEMTDVAEDVKTHGDSSVADIEEGRESQEEMTETQEDSVMAD 564
Query: 3563 XXXXEGKSDRK-----RKRGRPAK-VQGKAPLKTTEEEDVCFICFDGGNLVLCDRRACPK 3402
E + + K RKRGR K V+G K EEDVCF+CFDGG+LVLCDRR C K
Sbjct: 565 EEPEEVEEENKSAGGKRKRGRNTKTVKGTGKKK---EEDVCFMCFDGGDLVLCDRRGCTK 621
Query: 3401 AYHPACVNRDEAFFRSKGRWNCGWHICSNCEKGAHYMCYTCTYSLCKGCIKETEYFCVRG 3222
AYHP+CV+RDEAFF++KG+WNCGWH+CS CEK A Y+CYTC +SLCKGC K+ +FC+RG
Sbjct: 622 AYHPSCVDRDEAFFQTKGKWNCGWHLCSKCEKTATYLCYTCMFSLCKGCAKDAVFFCIRG 681
Query: 3221 NKGFCETCMRTVMLIEKNEQGNKEMAQVDFDDKNSWEYLFKEYYMDLKRKLSLTLDVLSQ 3042
NKG CETCM TV LIE+ +Q KE AQ+DF+DK SWEYLFK+Y++DLK +LSL+ + L Q
Sbjct: 682 NKGLCETCMETVKLIERKQQ-EKEPAQLDFNDKTSWEYLFKDYWIDLKTQLSLSPEELDQ 740
Query: 3041 ARNPFKGSSTSVRKAESSEDVYXXXXXXXXXXXXAKHHEVXXXXXXXXXXXXXXXKDEDL 2862
A+ P KG T+ K ++ + K + D++L
Sbjct: 741 AKRPLKGHETNASKQGTASETDYVTDGGSDSDSSPKKRKTRSRSKSGSAEKILSSGDKNL 800
Query: 2861 PSVTHVVGVGTSLTNDADWASKELLEFVAHMKNGDKSVLSQFDVQALLLEYIKQNNLRDP 2682
T +WASKELL+ V HM+ GD+S L +VQ LLL YIK+ NLRDP
Sbjct: 801 SDET------------MEWASKELLDLVVHMRRGDRSFLPMLEVQTLLLAYIKRYNLRDP 848
Query: 2681 RRKSQIVCDSRLVNLFGKARVGHFEMLKLLESHFLIKEDTHTDDIQG--TGGDEASQLDG 2508
RRKSQ++CDSRL NLFGK+ VGHFEML LL+SHFL KE DDIQG +E + +D
Sbjct: 849 RRKSQVICDSRLQNLFGKSHVGHFEMLNLLDSHFLKKEQNQADDIQGDIVDTEEPNHVDV 908
Query: 2507 D-GTSGALTXXXXXXXXXXXXXXXXGPQANLDDYAAIDVHNIKLLYLRRNLMEDLLEDGD 2331
D + G Q+NLDD+AA+D+HNI L+YLRR+L+EDLLED
Sbjct: 909 DENLDHPVKSGKDKKRKTRKKNVRKGRQSNLDDFAAVDMHNINLIYLRRSLVEDLLEDST 968
Query: 2330 KFQDNVVGTFVRIRISGAGHKQDMYRLVQVVGTRKAAAPYKTGKRLADVVLEILNLNKSE 2151
F++ V FVR+RISG KQD+YRLVQVVGT KA PYK GK+ D VLEILNL+K+E
Sbjct: 969 AFEEKVASAFVRLRISG-NQKQDLYRLVQVVGTSKAPEPYKVGKKTTDYVLEILNLDKTE 1027
Query: 2150 VISIDTISNQDFSEGECKRLRQSIKCGLISRMTVGEVQDKAMALQAVRVNDWLETEKLRI 1971
VISID ISNQDF+E ECKRL+QSIKCGLI+R+TVG++Q+KA+ALQ VRV + LE E LR
Sbjct: 1028 VISIDIISNQDFTEDECKRLKQSIKCGLINRLTVGDIQEKAIALQEVRVKNLLEAEILRF 1087
Query: 1970 SHLRDRASEQGRRKD---------------LRECVEKLQLLNRPEERFRRLEQVPVVHSD 1836
SHLRDRAS+ GRRK+ LRECVEKLQLL PEER RRLE++P +H+D
Sbjct: 1088 SHLRDRASDMGRRKEYPYLLKLSNSLTMLTLRECVEKLQLLKSPEERQRRLEEIPEIHAD 1147
Query: 1835 PKMDPGYXXXXXXXXDNSPQDKYMMSRDAGFSRKGRDPISPGKGSPALVDTRGAARKYAA 1656
PKMDP + ++K + R + F+R+GRDPISP KG + ++ Y+
Sbjct: 1148 PKMDPDCESEDEDEKEEKEKEKQLRPRSSSFNRRGRDPISPRKGGFSSNESWTGTSNYS- 1206
Query: 1655 SEPNINSSAVGVWDGVYSPNGAGDPTSDAQHMASATG-LGISAWSSQAVGRSGPSSGN-- 1485
N+SA YS G+ T ++ S+ + S W+S PS G+
Sbjct: 1207 -----NTSANRELSRSYSGRGS---TGRGDYLGSSDDKVSDSMWTSAREREVQPSLGSEK 1258
Query: 1484 PKEMAAP--------------LSTGLSSTIS---------------ETEKLWCYQDPSGK 1392
P+ ++ P LS ++S IS ++EK+W Y+DPSGK
Sbjct: 1259 PRSVSIPETPARSSRAIAPPELSPRIASEISMAPPAVVSQPVPKSNDSEKIWHYKDPSGK 1318
Query: 1391 TQGPFSMVQLRKWSTTGHFPVDLKIWKTSETQEDAILLNDALAGKFSKPLPHRNNSFSTP 1212
QGPFSM QLRKW+ TG+FP L+IWK +E+ D++LL DALAG F K +NS+
Sbjct: 1319 VQGPFSMAQLRKWNNTGYFPAKLEIWKANESPLDSVLLTDALAGLFQKQTQAVDNSYMKA 1378
Query: 1211 EKVVALS--NSSREVNLGGSWKGTTSMTWTDKNQMNLNWKDASS--------VANGNTKL 1062
+ V A S +S E NLG + + + +N + W S + K
Sbjct: 1379 Q-VAAFSGQSSQSEPNLGFAARIAPTTIEIPRNSQD-TWSQGGSLPSPTPNQITTPTAKR 1436
Query: 1061 TNSEA-WG--SGSAGWVAQTTDTRXXXXXXXXXXXXSLRGNMVSSGRVAHNPHPSFTGHP 891
N E+ W S Q+ + + + S+G + +P T P
Sbjct: 1437 RNFESRWSPTKPSPQSANQSMNYSVAQSGQSQTSRIDIPVVVNSAGALQPQTYPIPTPDP 1496
Query: 890 ------HRPTSHQWGQSGGRWSHGQNQENTWNSNR-SLSNSGHGYDSRANTMGPSVQSSG 732
H T H +GG+ S G Q + SN S N+ Y + + ++ PS G
Sbjct: 1497 INVSVNHSATLHSPTPAGGKQSWGSMQTDHGGSNTPSSQNNSTSYGTPSPSVLPSQSQPG 1556
Query: 731 ----ENWRNPQVNSGAPSTATGWG 672
++W+ + WG
Sbjct: 1557 FPPSDSWKVAVPSQPNAQAQAQWG 1580