BLASTX nr result

ID: Coptis23_contig00004189 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00004189
         (1796 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002278340.1| PREDICTED: uncharacterized protein LOC100257...   127   1e-26
emb|CAN82077.1| hypothetical protein VITISV_016663 [Vitis vinifera]   127   1e-26
ref|XP_002518498.1| hypothetical protein RCOM_0905070 [Ricinus c...   121   5e-25
ref|XP_002319845.1| predicted protein [Populus trichocarpa] gi|2...   115   4e-23
ref|XP_002522948.1| hypothetical protein RCOM_0584960 [Ricinus c...   113   1e-22

>ref|XP_002278340.1| PREDICTED: uncharacterized protein LOC100257339 [Vitis vinifera]
           gi|297737428|emb|CBI26629.3| unnamed protein product
           [Vitis vinifera]
          Length = 414

 Score =  127 bits (319), Expect = 1e-26
 Identities = 69/145 (47%), Positives = 97/145 (66%), Gaps = 1/145 (0%)
 Frame = +2

Query: 248 MSEENPVTDPALAQNLPVKRKRGRPRKDENLRRVEKSPVVTPKPDTAKKNPPKNISSTSN 427
           M+E N  ++P    N PVKRKRGRPRKD++ +R E + +  P  + A  N P  +   + 
Sbjct: 1   MNEANQGSNPDFPGNFPVKRKRGRPRKDQSKKRGENAHI-PPGFEGADANLPLQVEPINV 59

Query: 428 GDYAMVGQAVSGVLDGSFEAGYLITVKVGDTNTFLRGVVFEPGFVVPISEANDVASNVKM 607
            + AMVGQ VSGV+D SF+AGYL+TV+VG+++T L+GVVF+PG  VPIS  NDVA +V+M
Sbjct: 60  VNDAMVGQVVSGVVDASFDAGYLLTVRVGNSDTILKGVVFKPGRYVPISSENDVAPHVQM 119

Query: 608 IKRNEIPVDLSGHLHQQ-YNQKTEQ 679
           I+RNEI +       +Q YN +  +
Sbjct: 120 IRRNEIHLPAGNQSQEQGYNPQARE 144


>emb|CAN82077.1| hypothetical protein VITISV_016663 [Vitis vinifera]
          Length = 479

 Score =  127 bits (319), Expect = 1e-26
 Identities = 69/145 (47%), Positives = 97/145 (66%), Gaps = 1/145 (0%)
 Frame = +2

Query: 248 MSEENPVTDPALAQNLPVKRKRGRPRKDENLRRVEKSPVVTPKPDTAKKNPPKNISSTSN 427
           M+E N  ++P    N PVKRKRGRPRKD++ +R E + +  P  + A  N P  +   + 
Sbjct: 1   MNEANQGSNPDFPGNFPVKRKRGRPRKDQSKKRGENAHI-PPGFEGADANLPLQVEPINV 59

Query: 428 GDYAMVGQAVSGVLDGSFEAGYLITVKVGDTNTFLRGVVFEPGFVVPISEANDVASNVKM 607
            + AMVGQ VSGV+D SF+AGYL+TV+VG+++T L+GVVF+PG  VPIS  NDVA +V+M
Sbjct: 60  VNDAMVGQVVSGVVDASFDAGYLLTVRVGNSDTILKGVVFKPGRYVPISSENDVAPHVQM 119

Query: 608 IKRNEIPVDLSGHLHQQ-YNQKTEQ 679
           I+RNEI +       +Q YN +  +
Sbjct: 120 IRRNEIHLPAGNQSQEQGYNPQARE 144


>ref|XP_002518498.1| hypothetical protein RCOM_0905070 [Ricinus communis]
            gi|223542343|gb|EEF43885.1| hypothetical protein
            RCOM_0905070 [Ricinus communis]
          Length = 491

 Score =  121 bits (304), Expect = 5e-25
 Identities = 100/327 (30%), Positives = 157/327 (48%), Gaps = 7/327 (2%)
 Frame = +2

Query: 248  MSEENPVTDPALAQNLPVKRKRGRPRKDENLRRVEKSP-VVTPKPDTAKKNPPKNISSTS 424
            M+ ++  T  +   + P+KRKRGRPRKDE++ + E  P   TP  D+ KKN  +++ +  
Sbjct: 1    MNPQSQGTSSSSPADPPLKRKRGRPRKDESMVQGENMPATATPSADSLKKN-KQSVGTAG 59

Query: 425  NGDYAMVGQAVSGVLDGSFEAGYLITVKVGDTNTFLRGVVFEPGFVVPISEANDVASNVK 604
                 MVG+ VSGV++GSF+AGYL+ VKVGDT T LRGVVF PG   PI+ +NDVA   K
Sbjct: 60   AVSDEMVGKVVSGVIEGSFDAGYLLKVKVGDTETHLRGVVFLPGRFTPITASNDVAPEAK 119

Query: 605  MIKRNEIPVDLSGHLHQQYNQKTEQTVKVPEPLPSKAVTFIDQVSKVAEXXXXXXXXXXX 784
            M +R E+P+ +     Q          +  +P+  + +  I+QV  ++            
Sbjct: 120  MYRRTEMPIPVPTRPSQVPGPVPSSEERDKQPVELQHLAPINQVKSLSSELQ-------- 171

Query: 785  XXXKGAPFDMNQIPQPSPQALRQTE----IRTVRSPHILPGEQANEVNQVIQLSSHSLDA 952
                 +   + Q  QPS   L   +    + T +S   L G  A++  Q+++  + S  A
Sbjct: 172  -----SSVPLAQENQPSSNMLPLIDNLPPMSTTKSS--LGGGVASQ--QILESVTGSQSA 222

Query: 953  FPKDKMDIPLKGGHDNL-NQVELLQGSRISCLK-GAANGDETKDLKLELKSGTSIETFSD 1126
                 M      GH+ +  + ++L+    S  +    N + T+  K    S   I +F  
Sbjct: 223  SVMANM------GHEKVTGRNDMLKEFEASLTELPNVNVEATEQSKAMPHSAPPIHSFPG 276

Query: 1127 NWTIATESEAPDQVAGLEHEPIQKTDG 1207
            + TI  E E   Q+     +P Q  DG
Sbjct: 277  SGTINPEQEIQPQIVSNNFKPSQVCDG 303


>ref|XP_002319845.1| predicted protein [Populus trichocarpa] gi|222858221|gb|EEE95768.1|
           predicted protein [Populus trichocarpa]
          Length = 328

 Score =  115 bits (288), Expect = 4e-23
 Identities = 57/128 (44%), Positives = 83/128 (64%)
 Frame = +2

Query: 248 MSEENPVTDPALAQNLPVKRKRGRPRKDENLRRVEKSPVVTPKPDTAKKNPPKNISSTSN 427
           MSE N   +P  +  +P+KR+RGRPRK   +  V+ +    P       N P  +   +N
Sbjct: 1   MSEANQGNNPDASAIVPLKRRRGRPRKYPKME-VDHNAHAPPGFGVVNSNQPHQVGPVNN 59

Query: 428 GDYAMVGQAVSGVLDGSFEAGYLITVKVGDTNTFLRGVVFEPGFVVPISEANDVASNVKM 607
              AM+GQ+V GV++ +F+AGYL+ V+VGDT T LRGVVF+PG  +P++  ND+A +V M
Sbjct: 60  AIDAMIGQSVYGVIEATFDAGYLLNVRVGDTETTLRGVVFKPGHYIPVNPENDIAPDVPM 119

Query: 608 IKRNEIPV 631
           I+RNEIP+
Sbjct: 120 IRRNEIPL 127


>ref|XP_002522948.1| hypothetical protein RCOM_0584960 [Ricinus communis]
            gi|223537760|gb|EEF39378.1| hypothetical protein
            RCOM_0584960 [Ricinus communis]
          Length = 432

 Score =  113 bits (283), Expect = 1e-22
 Identities = 102/368 (27%), Positives = 156/368 (42%), Gaps = 42/368 (11%)
 Frame = +2

Query: 248  MSEENPVTDPALAQNLPVKRKRGRPRK----------------DENLRRVEKSPVVTPKP 379
            MSE N   +P  +  +PVKRKRGRPRK                  N    E+  V  P+ 
Sbjct: 1    MSEANQGNNPDASAIVPVKRKRGRPRKYPKSGLDPARDSHAPRGHNPNHGERYRV-PPES 59

Query: 380  DTAKKNPPKNISSTSNGDYAMVGQAVSGVLDGSFEAGYLITVKVGDTNTFLRGVVFEPGF 559
                 N P+ +   +N    MVGQ V G+++ +F+AGYL+TV+V ++ T LRGVVF+ G 
Sbjct: 60   VGVHGNQPRQVDPVNNPTDLMVGQTVHGIIEAAFDAGYLLTVRVSNSETTLRGVVFKAGH 119

Query: 560  VVPISEANDVASNVKMIKRNEIPVDLSGH--LHQQYNQKTEQ-----TVKVPEPLPSKAV 718
             VP+S  NDVA  V+MI+RNE+P+    +  +H   ++  E+       +V  P+ SK  
Sbjct: 120  YVPVSADNDVAPGVQMIRRNEMPLPRENYAQVHSHNSRSRERNGNVHAARVANPVVSKG- 178

Query: 719  TFIDQVSKVAEXXXXXXXXXXXXXXKGAPFDMNQIP--QPSPQALRQTEIRTVRSPHIL- 889
                QVS VA                  P + +  P  +PS  A +       +   +L 
Sbjct: 179  ---KQVSSVATETPSGVSGGNLVPAVLQPINSSNGPAGEPSSIAAQPDHAMASKGKQVLV 235

Query: 890  ---PGEQANEVNQVIQLSSHSLDAFPKDKMDIPLKGGHDNLNQVELLQGSRISCLKGAA- 1057
               P   +    QV  + +H    F  ++   P  G        +LLQ +    ++  A 
Sbjct: 236  DAHPSNGSTPTEQVQAVQTHLQFQFQNNRQVTP-SGIQQEAGLPKLLQEAEAKSMELPAM 294

Query: 1058 ------------NGDETKDLKLELKSGTSIETFSDNWTIATESEAPDQVAGLEHEPIQKT 1201
                        N   T+  + +  S   + T   + +IATE +  D    L  EP+Q  
Sbjct: 295  PFERLLTEVIKRNQVPTQSTETDTSSAGKLST--KDSSIATEDDVNDSDQALSVEPLQAV 352

Query: 1202 DGALNGQP 1225
               L+  P
Sbjct: 353  QPDLHNHP 360


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